RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 FYB1O15117 783 aa26.29■■□□□ 1.8
USP11-205ENST00000467378 ZNF827Q17R98 1081 aa26.29■■□□□ 1.8
USP11-205ENST00000467378 QSER1Q2KHR3 1735 aa26.28■■□□□ 1.8
USP11-205ENST00000467378 ABCC6O95255 1503 aa26.27■■□□□ 1.8
USP11-205ENST00000467378 POLD1P28340 1107 aa26.26■■□□□ 1.79
USP11-205ENST00000467378 COL24A1Q17RW2 1714 aa26.25■■□□□ 1.79
USP11-205ENST00000467378 TUBGCP6Q96RT7 1819 aa26.23■■□□□ 1.79
USP11-205ENST00000467378 SLC16A10Q8TF71 515 aa26.23■■□□□ 1.79
USP11-205ENST00000467378 GGNBP2Q9H3C7 697 aa26.23■■□□□ 1.79
USP11-205ENST00000467378 ANKRD26Q9UPS8 1709 aa26.22■■□□□ 1.79
USP11-205ENST00000467378 PER1O15534 1290 aaPredicted RBP26.22■■□□□ 1.79
USP11-205ENST00000467378 LRRC4BQ9NT99 713 aa26.22■■□□□ 1.79
USP11-205ENST00000467378 NFAT5O94916 1531 aa26.22■■□□□ 1.79
USP11-205ENST00000467378 COG3Q96JB2 828 aa26.21■■□□□ 1.79
USP11-205ENST00000467378 CGNL1Q0VF96 1302 aa26.2■■□□□ 1.79
USP11-205ENST00000467378 NLGN2Q8NFZ4 835 aa26.19■■□□□ 1.78
USP11-205ENST00000467378 NLRP2Q9NX02 1062 aa26.19■■□□□ 1.78
USP11-205ENST00000467378 LTN1O94822 1766 aa26.18■■□□□ 1.78
USP11-205ENST00000467378 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
USP11-205ENST00000467378 IL2RBP14784 551 aa26.17■■□□□ 1.78
USP11-205ENST00000467378 KNSTRNQ9Y448 316 aa26.17■■□□□ 1.78
USP11-205ENST00000467378 PNPLA7Q6ZV29 1317 aa26.15■■□□□ 1.78
USP11-205ENST00000467378 GRIN3BO60391 1043 aa26.14■■□□□ 1.78
USP11-205ENST00000467378 AMER1Q5JTC6 1135 aaPredicted RBP26.14■■□□□ 1.78
USP11-205ENST00000467378 TFCP2L1Q9NZI6 479 aa26.14■■□□□ 1.78
USP11-205ENST00000467378 SLC27A3Q5K4L6 730 aa26.13■■□□□ 1.77
USP11-205ENST00000467378 ERBB3P21860 1342 aa26.13■■□□□ 1.77
USP11-205ENST00000467378 NSD2O96028 1365 aa26.12■■□□□ 1.77
USP11-205ENST00000467378 CEP350Q5VT06 3117 aa26.12■■□□□ 1.77
USP11-205ENST00000467378 MAP2P11137 1827 aaKnown RBP26.11■■□□□ 1.77
USP11-205ENST00000467378 ZNF316A6NFI3 1004 aaPredicted RBP26.11■■□□□ 1.77
USP11-205ENST00000467378 YBX3P16989 372 aaKnown RBP eCLIP26.11■■□□□ 1.77
USP11-205ENST00000467378 FBLN1P23142 703 aa26.11■■□□□ 1.77
USP11-205ENST00000467378 ATP10DQ9P241 1426 aa26.1■■□□□ 1.77
USP11-205ENST00000467378 KCNQ4P56696 695 aa26.08■■□□□ 1.77
USP11-205ENST00000467378 LY75O60449 1722 aa26.08■■□□□ 1.76
USP11-205ENST00000467378 DDX10Q13206 875 aaKnown RBP26.07■■□□□ 1.76
USP11-205ENST00000467378 DDX54Q8TDD1 881 aaKnown RBP26.07■■□□□ 1.76
USP11-205ENST00000467378 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
USP11-205ENST00000467378 DOT1LQ8TEK3 1739 aa26.06■■□□□ 1.76
USP11-205ENST00000467378 MSH5O43196 834 aa26.06■■□□□ 1.76
USP11-205ENST00000467378 ANKRD24Q8TF21 1146 aa26.06■■□□□ 1.76
USP11-205ENST00000467378 GOLGB1Q14789 3259 aaKnown RBP26.05■■□□□ 1.76
USP11-205ENST00000467378 SYTL4Q96C24 671 aaPredicted RBP26.05■■□□□ 1.76
USP11-205ENST00000467378 GPBP1L1Q9HC44 474 aaPredicted RBP26.05■■□□□ 1.76
USP11-205ENST00000467378 MAP3K19Q56UN5 1328 aa26.05■■□□□ 1.76
USP11-205ENST00000467378 RRS1Q15050 365 aaKnown RBP26.03■■□□□ 1.76
USP11-205ENST00000467378 CC2D1BQ5T0F9 858 aaKnown RBP26.03■■□□□ 1.76
USP11-205ENST00000467378 MORC1Q86VD1 984 aa26.03■■□□□ 1.76
USP11-205ENST00000467378 HSPA6P17066 643 aa26.02■■□□□ 1.76
USP11-205ENST00000467378 IP6K1Q92551 441 aa26.01■■□□□ 1.75
USP11-205ENST00000467378 TNNT2P45379 298 aaPredicted RBP26■■□□□ 1.75
USP11-205ENST00000467378 ZNF526Q8TF50 670 aaPredicted RBP26■■□□□ 1.75
USP11-205ENST00000467378 FAM208AQ9UK61 1670 aaKnown RBP25.99■■□□□ 1.75
USP11-205ENST00000467378 PRIM1P49642 420 aaKnown RBP25.99■■□□□ 1.75
USP11-205ENST00000467378 HOXC9P31274 260 aa25.98■■□□□ 1.75
USP11-205ENST00000467378 AMPHP49418 695 aa25.98■■□□□ 1.75
USP11-205ENST00000467378 MSL1Q68DK7 614 aa25.98■■□□□ 1.75
USP11-205ENST00000467378 POLKQ9UBT6 870 aa25.98■■□□□ 1.75
USP11-205ENST00000467378 EMILIN1Q9Y6C2 1016 aa25.98■■□□□ 1.75
USP11-205ENST00000467378 COL23A1Q86Y22 540 aaPredicted RBP25.97■■□□□ 1.75
USP11-205ENST00000467378 CCNL1Q9UK58 526 aaPredicted RBP25.97■■□□□ 1.75
USP11-205ENST00000467378 RTL1A6NKG5 1358 aa25.96■■□□□ 1.75
USP11-205ENST00000467378 KIF24Q5T7B8 1368 aa25.96■■□□□ 1.75
USP11-205ENST00000467378 CNGB1Q14028 1251 aaPredicted RBP25.95■■□□□ 1.74
USP11-205ENST00000467378 LTV1Q96GA3 475 aaPredicted RBP25.94■■□□□ 1.74
USP11-205ENST00000467378 RGPD2P0DJD1 1756 aa25.93■■□□□ 1.74
USP11-205ENST00000467378 FLT4P35916 1363 aa25.93■■□□□ 1.74
USP11-205ENST00000467378 C5P01031 1676 aa25.92■■□□□ 1.74
USP11-205ENST00000467378 ADCY9O60503 1353 aa25.92■■□□□ 1.74
USP11-205ENST00000467378 SMG6Q86US8 1419 aaKnown RBP25.91■■□□□ 1.74
USP11-205ENST00000467378 HSP90AB2PQ58FF8 381 aa25.91■■□□□ 1.74
USP11-205ENST00000467378 CD2APQ9Y5K6 639 aa25.91■■□□□ 1.74
USP11-205ENST00000467378 INSRP06213 1382 aa25.91■■□□□ 1.74
USP11-205ENST00000467378 PPM1GO15355 546 aaPredicted RBP25.9■■□□□ 1.74
USP11-205ENST00000467378 TAF1LQ8IZX4 1826 aa25.88■■□□□ 1.73
USP11-205ENST00000467378 ZCRB1Q8TBF4 217 aaKnown RBP25.86■■□□□ 1.73
USP11-205ENST00000467378 MTHFSP49914 203 aa25.84■■□□□ 1.73
USP11-205ENST00000467378 WWC3Q9ULE0 1092 aa25.84■■□□□ 1.73
USP11-205ENST00000467378 PPP2R1AP30153 589 aa25.81■■□□□ 1.72
USP11-205ENST00000467378 FLAD1Q8NFF5 587 aa25.81■■□□□ 1.72
USP11-205ENST00000467378 MEGF6O75095 1541 aa25.8■■□□□ 1.72
USP11-205ENST00000467378 IGSF1Q8N6C5 1336 aa25.8■■□□□ 1.72
USP11-205ENST00000467378 KIF3CO14782 793 aa25.79■■□□□ 1.72
USP11-205ENST00000467378 NBPF6Q5VWK0 638 aa25.79■■□□□ 1.72
USP11-205ENST00000467378 NBPF4Q96M43 638 aa25.79■■□□□ 1.72
USP11-205ENST00000467378 EIF4A2Q14240 407 aaKnown RBP25.78■■□□□ 1.72
USP11-205ENST00000467378 RALBP1Q15311 655 aa25.78■■□□□ 1.72
USP11-205ENST00000467378 APLP1P51693 650 aa25.77■■□□□ 1.72
USP11-205ENST00000467378 HMGB2P26583 209 aaKnown RBP25.76■■□□□ 1.71
USP11-205ENST00000467378 C4BP0C0L5 1744 aa25.76■■□□□ 1.71
USP11-205ENST00000467378 UBR3Q6ZT12 1888 aa25.75■■□□□ 1.71
USP11-205ENST00000467378 EYA1Q99502 592 aa25.74■■□□□ 1.71
USP11-205ENST00000467378 COL3A1P02461 1466 aaPredicted RBP25.73■■□□□ 1.71
USP11-205ENST00000467378 ITGB4P16144 1822 aa25.73■■□□□ 1.71
USP11-205ENST00000467378 IL13P35225 146 aa25.73■■□□□ 1.71
USP11-205ENST00000467378 TOGARAM1Q9Y4F4 1720 aa25.73■■□□□ 1.71
USP11-205ENST00000467378 NCAPD2Q15021 1401 aa25.72■■□□□ 1.71
USP11-205ENST00000467378 PALLDQ8WX93 1383 aa25.72■■□□□ 1.71
USP11-205ENST00000467378 USHBP1Q8N6Y0 703 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms