RNA–Protein interactions for RNA: ENST00000467349.1

MRPL53-203, Transcript of mitochondrial ribosomal protein L53, humanhuman

TSL 2

Gene MRPL53, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53-203ENST00000467349 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
MRPL53-203ENST00000467349 KLRG1Q96E93 195 aa22.36■■□□□ 1.17
MRPL53-203ENST00000467349 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
MRPL53-203ENST00000467349 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
MRPL53-203ENST00000467349 NSD2O96028 1365 aa22.34■■□□□ 1.17
MRPL53-203ENST00000467349 NBPF1Q3BBV0 1214 aa22.33■■□□□ 1.17
MRPL53-203ENST00000467349 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
MRPL53-203ENST00000467349 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
MRPL53-203ENST00000467349 C5P01031 1676 aa22.32■■□□□ 1.16
MRPL53-203ENST00000467349 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
MRPL53-203ENST00000467349 CICQ96RK0 1608 aaPredicted RBP22.31■■□□□ 1.16
MRPL53-203ENST00000467349 NMRK2Q9NPI5 230 aa22.31■■□□□ 1.16
MRPL53-203ENST00000467349 PCNTO95613 3336 aa22.3■■□□□ 1.16
MRPL53-203ENST00000467349 USP54Q70EL1 1684 aa22.28■■□□□ 1.16
MRPL53-203ENST00000467349 TAF1LQ8IZX4 1826 aa22.28■■□□□ 1.16
MRPL53-203ENST00000467349 ZNF692Q9BU19 519 aaPredicted RBP22.27■■□□□ 1.16
MRPL53-203ENST00000467349 SLC34A2O95436 690 aa22.26■■□□□ 1.15
MRPL53-203ENST00000467349 USP47Q96K76 1375 aa22.25■■□□□ 1.15
MRPL53-203ENST00000467349 RBM46Q8TBY0 533 aaKnown RBP22.24■■□□□ 1.15
MRPL53-203ENST00000467349 MON2Q7Z3U7 1717 aa22.23■■□□□ 1.15
MRPL53-203ENST00000467349 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
MRPL53-203ENST00000467349 TOGARAM1Q9Y4F4 1720 aa22.23■■□□□ 1.15
MRPL53-203ENST00000467349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
MRPL53-203ENST00000467349 FLAD1Q8NFF5 587 aa22.22■■□□□ 1.15
MRPL53-203ENST00000467349 C16orf71Q8IYS4 520 aaPredicted RBP22.21■■□□□ 1.15
MRPL53-203ENST00000467349 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
MRPL53-203ENST00000467349 RAB3GAP2Q9H2M9 1393 aa22.21■■□□□ 1.15
MRPL53-203ENST00000467349 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.15
MRPL53-203ENST00000467349 N4BP2Q86UW6 1770 aaPredicted RBP22.2■■□□□ 1.14
MRPL53-203ENST00000467349 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
MRPL53-203ENST00000467349 LTV1Q96GA3 475 aaPredicted RBP22.19■■□□□ 1.14
MRPL53-203ENST00000467349 UBR3Q6ZT12 1888 aa22.19■■□□□ 1.14
MRPL53-203ENST00000467349 RGPD2P0DJD1 1756 aa22.18■■□□□ 1.14
MRPL53-203ENST00000467349 C4BP0C0L5 1744 aa22.18■■□□□ 1.14
MRPL53-203ENST00000467349 USP31Q70CQ4 1352 aa22.18■■□□□ 1.14
MRPL53-203ENST00000467349 AMIGO3Q86WK7 504 aa22.18■■□□□ 1.14
MRPL53-203ENST00000467349 PHF14O94880 888 aa22.17■■□□□ 1.14
MRPL53-203ENST00000467349 HSPA1AP0DMV8 641 aaKnown RBP22.17■■□□□ 1.14
MRPL53-203ENST00000467349 HSPA1BP0DMV9 641 aaKnown RBP22.17■■□□□ 1.14
MRPL53-203ENST00000467349 NME9Q86XW9 330 aa22.17■■□□□ 1.14
MRPL53-203ENST00000467349 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
MRPL53-203ENST00000467349 FSTL1Q12841 308 aa22.16■■□□□ 1.14
MRPL53-203ENST00000467349 BCS1LQ9Y276 419 aa22.15■■□□□ 1.14
MRPL53-203ENST00000467349 PXDNLA1KZ92 1463 aa22.15■■□□□ 1.14
MRPL53-203ENST00000467349 ZCRB1Q8TBF4 217 aaKnown RBP22.14■■□□□ 1.13
MRPL53-203ENST00000467349 AK7Q96M32 723 aa22.14■■□□□ 1.13
MRPL53-203ENST00000467349 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
MRPL53-203ENST00000467349 MEGF6O75095 1541 aa22.13■■□□□ 1.13
MRPL53-203ENST00000467349 ARHGAP27Q6ZUM4 889 aa22.13■■□□□ 1.13
MRPL53-203ENST00000467349 PALLDQ8WX93 1383 aa22.12■■□□□ 1.13
MRPL53-203ENST00000467349 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
MRPL53-203ENST00000467349 KCPQ6ZWJ8 1503 aa22.11■■□□□ 1.13
MRPL53-203ENST00000467349 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.11■■□□□ 1.13
MRPL53-203ENST00000467349 IP6K1Q92551 441 aa22.09■■□□□ 1.13
MRPL53-203ENST00000467349 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.13
MRPL53-203ENST00000467349 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
MRPL53-203ENST00000467349 A0A0G2JLW4 131 aa22.07■■□□□ 1.12
MRPL53-203ENST00000467349 PLEKHG2Q9H7P9 1386 aa22.07■■□□□ 1.12
MRPL53-203ENST00000467349 SBNO2Q9Y2G9 1366 aa22.07■■□□□ 1.12
MRPL53-203ENST00000467349 TNRC6CQ9HCJ0 1690 aaKnown RBP22.07■■□□□ 1.12
MRPL53-203ENST00000467349 RRAGCQ9HB90 399 aa22.06■■□□□ 1.12
MRPL53-203ENST00000467349 ITGB4P16144 1822 aa22.06■■□□□ 1.12
MRPL53-203ENST00000467349 NSD3Q9BZ95 1437 aa22.06■■□□□ 1.12
MRPL53-203ENST00000467349 HMGB2P26583 209 aaKnown RBP22.05■■□□□ 1.12
MRPL53-203ENST00000467349 FCHSD2O94868 740 aa22.04■■□□□ 1.12
MRPL53-203ENST00000467349 MMP10P09238 476 aa22.04■■□□□ 1.12
MRPL53-203ENST00000467349 MPRIPQ6WCQ1 1025 aa22.04■■□□□ 1.12
MRPL53-203ENST00000467349 KDM2BQ8NHM5 1336 aa22.04■■□□□ 1.12
MRPL53-203ENST00000467349 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
MRPL53-203ENST00000467349 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
MRPL53-203ENST00000467349 SSFA2P28290 1259 aa22.03■■□□□ 1.12
MRPL53-203ENST00000467349 SMC1BQ8NDV3 1235 aa22.03■■□□□ 1.12
MRPL53-203ENST00000467349 TGFB2P61812 414 aa22.02■■□□□ 1.12
MRPL53-203ENST00000467349 C10orf71Q711Q0 1435 aa22.02■■□□□ 1.12
MRPL53-203ENST00000467349 DPEP1P16444 411 aa22■■□□□ 1.11
MRPL53-203ENST00000467349 MAP2P11137 1827 aaKnown RBP21.99■■□□□ 1.11
MRPL53-203ENST00000467349 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
MRPL53-203ENST00000467349 SBF1O95248 1867 aa21.98■■□□□ 1.11
MRPL53-203ENST00000467349 HOXC9P31274 260 aa21.98■■□□□ 1.11
MRPL53-203ENST00000467349 LINC00116Q8NCU8 138 aa21.98■■□□□ 1.11
MRPL53-203ENST00000467349 RNF181Q9P0P0 153 aa21.98■■□□□ 1.11
MRPL53-203ENST00000467349 SMARCC1Q92922 1105 aaPredicted RBP21.97■■□□□ 1.11
MRPL53-203ENST00000467349 MAP3K19Q56UN5 1328 aa21.97■■□□□ 1.11
MRPL53-203ENST00000467349 EDC4Q6P2E9 1401 aaKnown RBP21.97■■□□□ 1.11
MRPL53-203ENST00000467349 GNPATO15228 680 aa21.96■■□□□ 1.11
MRPL53-203ENST00000467349 TMC1Q8TDI8 760 aa21.96■■□□□ 1.11
MRPL53-203ENST00000467349 FBLN1P23142 703 aa21.95■■□□□ 1.1
MRPL53-203ENST00000467349 AMPHP49418 695 aa21.95■■□□□ 1.1
MRPL53-203ENST00000467349 RAPGEF4Q8WZA2 1011 aa21.95■■□□□ 1.1
MRPL53-203ENST00000467349 NBPF6Q5VWK0 638 aa21.94■■□□□ 1.1
MRPL53-203ENST00000467349 HDGFL2Q7Z4V5 671 aaPredicted RBP21.94■■□□□ 1.1
MRPL53-203ENST00000467349 NBPF4Q96M43 638 aa21.94■■□□□ 1.1
MRPL53-203ENST00000467349 C4AP0C0L4 1744 aa21.93■■□□□ 1.1
MRPL53-203ENST00000467349 CGNL1Q0VF96 1302 aa21.93■■□□□ 1.1
MRPL53-203ENST00000467349 PCDH11XQ9BZA7 1347 aa21.93■■□□□ 1.1
MRPL53-203ENST00000467349 PCDH11YQ9BZA8 1340 aa21.93■■□□□ 1.1
MRPL53-203ENST00000467349 PCDH10Q9P2E7 1040 aa21.93■■□□□ 1.1
MRPL53-203ENST00000467349 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
MRPL53-203ENST00000467349 LOC102724428A0A0B4J2F2 783 aa21.91■■□□□ 1.1
MRPL53-203ENST00000467349 SIK1P57059 783 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms