RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 RGPD3A6NKT7 1758 aaPredicted RBP12.86□□□□□ -0.35
SDCCAG3-208ENST00000466579 RGPD4Q7Z3J3 1758 aa12.86□□□□□ -0.35
SDCCAG3-208ENST00000466579 NHSQ6T4R5 1651 aa12.86□□□□□ -0.35
SDCCAG3-208ENST00000466579 KDRP35968 1356 aa12.85□□□□□ -0.35
SDCCAG3-208ENST00000466579 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
SDCCAG3-208ENST00000466579 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
SDCCAG3-208ENST00000466579 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
SDCCAG3-208ENST00000466579 TRIM37O94972 964 aa12.84□□□□□ -0.35
SDCCAG3-208ENST00000466579 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
SDCCAG3-208ENST00000466579 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
SDCCAG3-208ENST00000466579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
SDCCAG3-208ENST00000466579 BAG6P46379 1132 aa12.83□□□□□ -0.36
SDCCAG3-208ENST00000466579 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
SDCCAG3-208ENST00000466579 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
SDCCAG3-208ENST00000466579 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
SDCCAG3-208ENST00000466579 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
SDCCAG3-208ENST00000466579 RREB1Q92766 1687 aa12.82□□□□□ -0.36
SDCCAG3-208ENST00000466579 CAMKK2Q96RR4 588 aa12.81□□□□□ -0.36
SDCCAG3-208ENST00000466579 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
SDCCAG3-208ENST00000466579 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
SDCCAG3-208ENST00000466579 DOT1LQ8TEK3 1739 aa12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 PLSCR1O15162 318 aa12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 CACNB1Q02641 598 aaPredicted RBP12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 NKX1-1Q15270 411 aaPredicted RBP12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 DDX54Q8TDD1 881 aaKnown RBP12.8□□□□□ -0.36
SDCCAG3-208ENST00000466579 BTAF1O14981 1849 aa12.79□□□□□ -0.36
SDCCAG3-208ENST00000466579 CYP27B1O15528 508 aa12.79□□□□□ -0.36
SDCCAG3-208ENST00000466579 APBA3O96018 575 aa12.79□□□□□ -0.36
SDCCAG3-208ENST00000466579 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
SDCCAG3-208ENST00000466579 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
SDCCAG3-208ENST00000466579 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 KCNQ2O43526 872 aa12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 RALBP1Q15311 655 aa12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 NUP188Q5SRE5 1749 aa12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 TOGARAM1Q9Y4F4 1720 aa12.78□□□□□ -0.36
SDCCAG3-208ENST00000466579 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
SDCCAG3-208ENST00000466579 ITGB4P16144 1822 aa12.76□□□□□ -0.37
SDCCAG3-208ENST00000466579 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
SDCCAG3-208ENST00000466579 PHKG2P15735 406 aa12.76□□□□□ -0.37
SDCCAG3-208ENST00000466579 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
SDCCAG3-208ENST00000466579 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
SDCCAG3-208ENST00000466579 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
SDCCAG3-208ENST00000466579 PLEKHO1Q53GL0 409 aaPredicted RBP12.75□□□□□ -0.37
SDCCAG3-208ENST00000466579 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
SDCCAG3-208ENST00000466579 ACSBG1Q96GR2 724 aa12.75□□□□□ -0.37
SDCCAG3-208ENST00000466579 LY75O60449 1722 aa12.74□□□□□ -0.37
SDCCAG3-208ENST00000466579 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
SDCCAG3-208ENST00000466579 PROM2Q8N271 834 aa12.74□□□□□ -0.37
SDCCAG3-208ENST00000466579 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
SDCCAG3-208ENST00000466579 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-208ENST00000466579 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
SDCCAG3-208ENST00000466579 HMOX1P09601 288 aa12.72□□□□□ -0.37
SDCCAG3-208ENST00000466579 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
SDCCAG3-208ENST00000466579 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
SDCCAG3-208ENST00000466579 PAPPAQ13219 1627 aa12.72□□□□□ -0.37
SDCCAG3-208ENST00000466579 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
SDCCAG3-208ENST00000466579 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.37
SDCCAG3-208ENST00000466579 ZNF530Q6P9A1 599 aaPredicted RBP12.71□□□□□ -0.37
SDCCAG3-208ENST00000466579 DCAF5Q96JK2 942 aa12.71□□□□□ -0.37
SDCCAG3-208ENST00000466579 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
SDCCAG3-208ENST00000466579 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
SDCCAG3-208ENST00000466579 U2SURPO15042 1029 aaKnown RBP12.7□□□□□ -0.38
SDCCAG3-208ENST00000466579 FCHSD2O94868 740 aa12.7□□□□□ -0.38
SDCCAG3-208ENST00000466579 TXNRD1Q16881 649 aa12.7□□□□□ -0.38
SDCCAG3-208ENST00000466579 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
SDCCAG3-208ENST00000466579 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
SDCCAG3-208ENST00000466579 MTHFSDQ2M296 383 aaKnown RBP12.69□□□□□ -0.38
SDCCAG3-208ENST00000466579 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
SDCCAG3-208ENST00000466579 MRC1P22897 1456 aa12.69□□□□□ -0.38
SDCCAG3-208ENST00000466579 C1orf141Q5JVX7 400 aa12.68□□□□□ -0.38
SDCCAG3-208ENST00000466579 PIGBQ92521 554 aa12.68□□□□□ -0.38
SDCCAG3-208ENST00000466579 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
SDCCAG3-208ENST00000466579 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
SDCCAG3-208ENST00000466579 U2AF1L5P0DN76 240 aaPredicted RBP12.67□□□□□ -0.38
SDCCAG3-208ENST00000466579 U2AF1Q01081 240 aaKnown RBP eCLIP12.67□□□□□ -0.38
SDCCAG3-208ENST00000466579 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
SDCCAG3-208ENST00000466579 QSER1Q2KHR3 1735 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 NBPF14Q5TI25 921 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 SMARCC1Q92922 1105 aaPredicted RBP12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
SDCCAG3-208ENST00000466579 PLEKHF1Q96S99 279 aa12.65□□□□□ -0.38
SDCCAG3-208ENST00000466579 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
SDCCAG3-208ENST00000466579 SIPA1L3O60292 1781 aaPredicted RBP12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 RNMTO43148 476 aaKnown RBP12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 ATG3Q9NT62 314 aa12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 CEMIPQ8WUJ3 1361 aa12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
SDCCAG3-208ENST00000466579 C5P01031 1676 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms