RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 SSH1Q8WYL5 1049 aa27.19■■□□□ 1.94
PPP1R3F-203ENST00000466508 CRB1P82279 1406 aa27.19■■□□□ 1.94
PPP1R3F-203ENST00000466508 RTF1Q92541 710 aaKnown RBP27.19■■□□□ 1.94
PPP1R3F-203ENST00000466508 SOS2Q07890 1332 aaPredicted RBP27.18■■□□□ 1.94
PPP1R3F-203ENST00000466508 HTATSF1O43719 755 aaKnown RBP27.18■■□□□ 1.94
PPP1R3F-203ENST00000466508 ALDH1L2Q3SY69 923 aa27.18■■□□□ 1.94
PPP1R3F-203ENST00000466508 COL18A1P39060 1754 aa27.18■■□□□ 1.94
PPP1R3F-203ENST00000466508 ABCC6O95255 1503 aa27.18■■□□□ 1.94
PPP1R3F-203ENST00000466508 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
PPP1R3F-203ENST00000466508 ANKRD24Q8TF21 1146 aa27.17■■□□□ 1.94
PPP1R3F-203ENST00000466508 NHSL1Q5SYE7 1610 aa27.17■■□□□ 1.94
PPP1R3F-203ENST00000466508 AXIN2Q9Y2T1 843 aa27.17■■□□□ 1.94
PPP1R3F-203ENST00000466508 CHL1O00533 1208 aa27.16■■□□□ 1.94
PPP1R3F-203ENST00000466508 PANK1Q8TE04 598 aa27.16■■□□□ 1.94
PPP1R3F-203ENST00000466508 LRRC59Q96AG4 307 aaKnown RBP27.16■■□□□ 1.94
PPP1R3F-203ENST00000466508 ZKSCAN2Q63HK3 967 aa27.15■■□□□ 1.94
PPP1R3F-203ENST00000466508 MAP3K5Q99683 1374 aa27.15■■□□□ 1.94
PPP1R3F-203ENST00000466508 LMO7Q8WWI1 1683 aa27.14■■□□□ 1.94
PPP1R3F-203ENST00000466508 GNAT3A8MTJ3 354 aa27.14■■□□□ 1.94
PPP1R3F-203ENST00000466508 VAMP4O75379 141 aa27.14■■□□□ 1.94
PPP1R3F-203ENST00000466508 ERBB3P21860 1342 aa27.14■■□□□ 1.93
PPP1R3F-203ENST00000466508 KIF16BQ96L93 1317 aa27.14■■□□□ 1.93
PPP1R3F-203ENST00000466508 CABLES1Q8TDN4 633 aa27.13■■□□□ 1.93
PPP1R3F-203ENST00000466508 TSPYL6Q8N831 410 aa27.13■■□□□ 1.93
PPP1R3F-203ENST00000466508 COG6Q9Y2V7 657 aa27.12■■□□□ 1.93
PPP1R3F-203ENST00000466508 CPDO75976 1380 aa27.11■■□□□ 1.93
PPP1R3F-203ENST00000466508 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
PPP1R3F-203ENST00000466508 MS4A1P11836 297 aa27.11■■□□□ 1.93
PPP1R3F-203ENST00000466508 BRPF1P55201 1214 aaPredicted RBP27.11■■□□□ 1.93
PPP1R3F-203ENST00000466508 TWISTNBQ3B726 338 aaPredicted RBP27.11■■□□□ 1.93
PPP1R3F-203ENST00000466508 RLBP1P12271 317 aa27.1■■□□□ 1.93
PPP1R3F-203ENST00000466508 C8orf58Q8NAV2 365 aa27.1■■□□□ 1.93
PPP1R3F-203ENST00000466508 TNNQ9UQP3 1299 aa27.1■■□□□ 1.93
PPP1R3F-203ENST00000466508 KIAA0232Q92628 1395 aa27.09■■□□□ 1.93
PPP1R3F-203ENST00000466508 TSHZ2Q9NRE2 1034 aa27.09■■□□□ 1.93
PPP1R3F-203ENST00000466508 ABCA3Q99758 1704 aa27.09■■□□□ 1.93
PPP1R3F-203ENST00000466508 PHLPP1O60346 1717 aa27.08■■□□□ 1.93
PPP1R3F-203ENST00000466508 TRIM27P14373 513 aa27.08■■□□□ 1.93
PPP1R3F-203ENST00000466508 ATF7IPQ6VMQ6 1270 aa27.08■■□□□ 1.93
PPP1R3F-203ENST00000466508 FTSJ3Q8IY81 847 aaKnown RBP27.07■■□□□ 1.92
PPP1R3F-203ENST00000466508 DZIP1LQ8IYY4 767 aaKnown RBP27.07■■□□□ 1.92
PPP1R3F-203ENST00000466508 CLUAP1Q96AJ1 413 aa27.07■■□□□ 1.92
PPP1R3F-203ENST00000466508 NOB1Q9ULX3 412 aaKnown RBP27.07■■□□□ 1.92
PPP1R3F-203ENST00000466508 ELL2O00472 640 aaPredicted RBP27.06■■□□□ 1.92
PPP1R3F-203ENST00000466508 IPO8O15397 1037 aaKnown RBP27.06■■□□□ 1.92
PPP1R3F-203ENST00000466508 AAMPQ13685 434 aa27.06■■□□□ 1.92
PPP1R3F-203ENST00000466508 HAP1P54257 671 aaPredicted RBP27.06■■□□□ 1.92
PPP1R3F-203ENST00000466508 AMOTQ4VCS5 1084 aa27.04■■□□□ 1.92
PPP1R3F-203ENST00000466508 TSPYL4Q9UJ04 414 aa27.04■■□□□ 1.92
PPP1R3F-203ENST00000466508 VIRMAQ69YN4 1812 aaKnown RBP27.04■■□□□ 1.92
PPP1R3F-203ENST00000466508 KDM2BQ8NHM5 1336 aa27.04■■□□□ 1.92
PPP1R3F-203ENST00000466508 PLEKHO1Q53GL0 409 aaPredicted RBP27.04■■□□□ 1.92
PPP1R3F-203ENST00000466508 IL17REQ8NFR9 667 aa27.04■■□□□ 1.92
PPP1R3F-203ENST00000466508 MVPQ14764 893 aaKnown RBP27.03■■□□□ 1.92
PPP1R3F-203ENST00000466508 MRPL50Q8N5N7 158 aaKnown RBP27.03■■□□□ 1.92
PPP1R3F-203ENST00000466508 CEMIPQ8WUJ3 1361 aa27.03■■□□□ 1.92
PPP1R3F-203ENST00000466508 AHDC1Q5TGY3 1603 aaPredicted RBP27.02■■□□□ 1.92
PPP1R3F-203ENST00000466508 CHRNA2Q15822 529 aa27.02■■□□□ 1.92
PPP1R3F-203ENST00000466508 CENPQQ7L2Z9 268 aaPredicted RBP27.01■■□□□ 1.91
PPP1R3F-203ENST00000466508 KRT24Q2M2I5 525 aa27■■□□□ 1.91
PPP1R3F-203ENST00000466508 BABAM1Q9NWV8 329 aa27■■□□□ 1.91
PPP1R3F-203ENST00000466508 MIS18AQ9NYP9 233 aa27■■□□□ 1.91
PPP1R3F-203ENST00000466508 COL16A1Q07092 1604 aaPredicted RBP27■■□□□ 1.91
PPP1R3F-203ENST00000466508 AKAP4Q5JQC9 854 aa27■■□□□ 1.91
PPP1R3F-203ENST00000466508 ZNF530Q6P9A1 599 aaPredicted RBP27■■□□□ 1.91
PPP1R3F-203ENST00000466508 ARHGAP45Q92619 1136 aa27■■□□□ 1.91
PPP1R3F-203ENST00000466508 NLRP2Q9NX02 1062 aa26.98■■□□□ 1.91
PPP1R3F-203ENST00000466508 JCADQ9P266 1359 aa26.97■■□□□ 1.91
PPP1R3F-203ENST00000466508 TAF7Q15545 349 aaPredicted RBP26.97■■□□□ 1.91
PPP1R3F-203ENST00000466508 PLEKHG2Q9H7P9 1386 aa26.96■■□□□ 1.91
PPP1R3F-203ENST00000466508 OVOS2A0A0G2JMS6 1433 aa26.96■■□□□ 1.91
PPP1R3F-203ENST00000466508 CSB-PGBD3P0DP91 1061 aa26.96■■□□□ 1.91
PPP1R3F-203ENST00000466508 PRDM11Q9NQV5 511 aa26.96■■□□□ 1.91
PPP1R3F-203ENST00000466508 C1orf141Q5JVX7 400 aa26.95■■□□□ 1.9
PPP1R3F-203ENST00000466508 DDX19BQ9UMR2 479 aa26.95■■□□□ 1.9
PPP1R3F-203ENST00000466508 TCERG1O14776 1098 aaKnown RBP26.94■■□□□ 1.9
PPP1R3F-203ENST00000466508 RAPGEF4Q8WZA2 1011 aa26.94■■□□□ 1.9
PPP1R3F-203ENST00000466508 KDM3BQ7LBC6 1761 aa26.94■■□□□ 1.9
PPP1R3F-203ENST00000466508 ITPRIPQ8IWB1 547 aa26.93■■□□□ 1.9
PPP1R3F-203ENST00000466508 TMEM57Q8N5G2 664 aa26.93■■□□□ 1.9
PPP1R3F-203ENST00000466508 ADAMTS7Q9UKP4 1686 aa26.93■■□□□ 1.9
PPP1R3F-203ENST00000466508 LGR6Q9HBX8 967 aa26.92■■□□□ 1.9
PPP1R3F-203ENST00000466508 MEGF6O75095 1541 aa26.92■■□□□ 1.9
PPP1R3F-203ENST00000466508 SOS1Q07889 1333 aaPredicted RBP26.91■■□□□ 1.9
PPP1R3F-203ENST00000466508 CACNA1FO60840 1977 aa26.91■■□□□ 1.9
PPP1R3F-203ENST00000466508 PKD1L3Q7Z443 1732 aa26.9■■□□□ 1.9
PPP1R3F-203ENST00000466508 COL5A2P05997 1499 aaPredicted RBP26.9■■□□□ 1.9
PPP1R3F-203ENST00000466508 SIPA1L3O60292 1781 aaPredicted RBP26.89■■□□□ 1.9
PPP1R3F-203ENST00000466508 TATP17735 454 aaPredicted RBP26.89■■□□□ 1.9
PPP1R3F-203ENST00000466508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.89■■□□□ 1.9
PPP1R3F-203ENST00000466508 ABCC4O15439 1325 aa26.89■■□□□ 1.9
PPP1R3F-203ENST00000466508 MPRIPQ6WCQ1 1025 aa26.89■■□□□ 1.89
PPP1R3F-203ENST00000466508 API5Q9BZZ5 524 aaKnown RBP26.89■■□□□ 1.89
PPP1R3F-203ENST00000466508 PCDHB15Q9Y5E8 787 aa26.88■■□□□ 1.89
PPP1R3F-203ENST00000466508 WDR17Q8IZU2 1322 aa26.88■■□□□ 1.89
PPP1R3F-203ENST00000466508 RNMTO43148 476 aaKnown RBP26.87■■□□□ 1.89
PPP1R3F-203ENST00000466508 TEFQ10587 303 aa26.87■■□□□ 1.89
PPP1R3F-203ENST00000466508 SCN11AQ9UI33 1791 aa26.87■■□□□ 1.89
PPP1R3F-203ENST00000466508 IGHDP01880 384 aa26.87■■□□□ 1.89
PPP1R3F-203ENST00000466508 PARP4Q9UKK3 1724 aaKnown RBP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms