RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 USP31Q70CQ4 1352 aa13.31□□□□□ -0.28
ABCF3-205ENST00000466416 PRELPP51888 382 aa13.3□□□□□ -0.28
ABCF3-205ENST00000466416 KTN1Q86UP2 1357 aaKnown RBP13.3□□□□□ -0.28
ABCF3-205ENST00000466416 CAPN15O75808 1086 aa13.29□□□□□ -0.28
ABCF3-205ENST00000466416 IGSF1Q8N6C5 1336 aa13.29□□□□□ -0.28
ABCF3-205ENST00000466416 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
ABCF3-205ENST00000466416 TNS4Q8IZW8 715 aa13.28□□□□□ -0.28
ABCF3-205ENST00000466416 JMYQ8N9B5 988 aa13.28□□□□□ -0.28
ABCF3-205ENST00000466416 KLRG1Q96E93 195 aa13.28□□□□□ -0.28
ABCF3-205ENST00000466416 NSD2O96028 1365 aa13.28□□□□□ -0.28
ABCF3-205ENST00000466416 USP47Q96K76 1375 aa13.28□□□□□ -0.28
ABCF3-205ENST00000466416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.29
ABCF3-205ENST00000466416 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
ABCF3-205ENST00000466416 LY75O60449 1722 aa13.26□□□□□ -0.29
ABCF3-205ENST00000466416 IP6K1Q92551 441 aa13.26□□□□□ -0.29
ABCF3-205ENST00000466416 RBM46Q8TBY0 533 aaKnown RBP13.25□□□□□ -0.29
ABCF3-205ENST00000466416 NME9Q86XW9 330 aa13.24□□□□□ -0.29
ABCF3-205ENST00000466416 FSTL1Q12841 308 aa13.23□□□□□ -0.29
ABCF3-205ENST00000466416 WWC3Q9ULE0 1092 aa13.23□□□□□ -0.29
ABCF3-205ENST00000466416 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-205ENST00000466416 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-205ENST00000466416 AK7Q96M32 723 aa13.21□□□□□ -0.29
ABCF3-205ENST00000466416 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
ABCF3-205ENST00000466416 CGNL1Q0VF96 1302 aa13.2□□□□□ -0.3
ABCF3-205ENST00000466416 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
ABCF3-205ENST00000466416 TGFB2P61812 414 aa13.19□□□□□ -0.3
ABCF3-205ENST00000466416 HTRA3P83110 453 aa13.19□□□□□ -0.3
ABCF3-205ENST00000466416 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
ABCF3-205ENST00000466416 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
ABCF3-205ENST00000466416 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
ABCF3-205ENST00000466416 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
ABCF3-205ENST00000466416 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
ABCF3-205ENST00000466416 CICQ96RK0 1608 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-205ENST00000466416 LTN1O94822 1766 aa13.18□□□□□ -0.3
ABCF3-205ENST00000466416 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.18□□□□□ -0.3
ABCF3-205ENST00000466416 SSFA2P28290 1259 aa13.18□□□□□ -0.3
ABCF3-205ENST00000466416 ARHGAP27Q6ZUM4 889 aa13.18□□□□□ -0.3
ABCF3-205ENST00000466416 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
ABCF3-205ENST00000466416 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
ABCF3-205ENST00000466416 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
ABCF3-205ENST00000466416 PHF14O94880 888 aa13.16□□□□□ -0.3
ABCF3-205ENST00000466416 HOXC9P31274 260 aa13.16□□□□□ -0.3
ABCF3-205ENST00000466416 AMPHP49418 695 aa13.16□□□□□ -0.3
ABCF3-205ENST00000466416 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
ABCF3-205ENST00000466416 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
ABCF3-205ENST00000466416 C5P01031 1676 aa13.15□□□□□ -0.3
ABCF3-205ENST00000466416 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.3
ABCF3-205ENST00000466416 EDC4Q6P2E9 1401 aaKnown RBP13.15□□□□□ -0.3
ABCF3-205ENST00000466416 MPRIPQ6WCQ1 1025 aa13.15□□□□□ -0.3
ABCF3-205ENST00000466416 TMC1Q8TDI8 760 aa13.15□□□□□ -0.3
ABCF3-205ENST00000466416 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
ABCF3-205ENST00000466416 TERF2IPQ9NYB0 399 aa13.15□□□□□ -0.3
ABCF3-205ENST00000466416 KDM2BQ8NHM5 1336 aa13.14□□□□□ -0.31
ABCF3-205ENST00000466416 MEGF6O75095 1541 aa13.14□□□□□ -0.31
ABCF3-205ENST00000466416 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
ABCF3-205ENST00000466416 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 CD163L1Q9NR16 1453 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 SLC34A2O95436 690 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 MMP10P09238 476 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-205ENST00000466416 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 C9orf131Q5VYM1 1079 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
ABCF3-205ENST00000466416 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 FCHSD2O94868 740 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 COG3Q96JB2 828 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
ABCF3-205ENST00000466416 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
ABCF3-205ENST00000466416 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
ABCF3-205ENST00000466416 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
ABCF3-205ENST00000466416 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
ABCF3-205ENST00000466416 NLGN1Q8N2Q7 840 aa13.11□□□□□ -0.31
ABCF3-205ENST00000466416 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
ABCF3-205ENST00000466416 C10orf71Q711Q0 1435 aa13.11□□□□□ -0.31
ABCF3-205ENST00000466416 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
ABCF3-205ENST00000466416 SIK1P57059 783 aa13.1□□□□□ -0.31
ABCF3-205ENST00000466416 CCDC87Q9NVE4 849 aa13.1□□□□□ -0.31
ABCF3-205ENST00000466416 GNPATO15228 680 aa13.09□□□□□ -0.31
ABCF3-205ENST00000466416 DPEP1P16444 411 aa13.09□□□□□ -0.31
ABCF3-205ENST00000466416 TMF1P82094 1093 aa13.09□□□□□ -0.31
ABCF3-205ENST00000466416 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
ABCF3-205ENST00000466416 PIGBQ92521 554 aa13.09□□□□□ -0.31
ABCF3-205ENST00000466416 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
ABCF3-205ENST00000466416 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.32
ABCF3-205ENST00000466416 CYP27B1O15528 508 aa13.08□□□□□ -0.32
ABCF3-205ENST00000466416 USHBP1Q8N6Y0 703 aa13.08□□□□□ -0.32
ABCF3-205ENST00000466416 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 FBLN1P23142 703 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 PIM2Q9P1W9 311 aa13.07□□□□□ -0.32
ABCF3-205ENST00000466416 PCNTO95613 3336 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms