RNA–Protein interactions for RNA: ENST00000466290.1

SKIV2L-205, Transcript of Ski2 like RNA helicase, humanhuman

TSL 3

Gene SKIV2L, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-205ENST00000466290 MARCH10Q8NA82 808 aaPredicted RBP13.58□□□□□ -0.24
SKIV2L-205ENST00000466290 DIAPH1O60610 1272 aaKnown RBP13.57□□□□□ -0.24
SKIV2L-205ENST00000466290 IL13P35225 146 aa13.57□□□□□ -0.24
SKIV2L-205ENST00000466290 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
SKIV2L-205ENST00000466290 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
SKIV2L-205ENST00000466290 BAG6P46379 1132 aa13.56□□□□□ -0.24
SKIV2L-205ENST00000466290 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
SKIV2L-205ENST00000466290 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
SKIV2L-205ENST00000466290 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
SKIV2L-205ENST00000466290 MEGF6O75095 1541 aa13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 CNGB1Q14028 1251 aaPredicted RBP13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 FAM182BQ5T319 152 aa13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 DIEXFQ68CQ4 756 aaKnown RBP13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 NUDCQ9Y266 331 aa13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
SKIV2L-205ENST00000466290 RGPD2P0DJD1 1756 aa13.54□□□□□ -0.24
SKIV2L-205ENST00000466290 TRIM37O94972 964 aa13.54□□□□□ -0.24
SKIV2L-205ENST00000466290 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
SKIV2L-205ENST00000466290 DDX54Q8TDD1 881 aaKnown RBP13.54□□□□□ -0.24
SKIV2L-205ENST00000466290 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
SKIV2L-205ENST00000466290 KDRP35968 1356 aa13.54□□□□□ -0.24
SKIV2L-205ENST00000466290 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
SKIV2L-205ENST00000466290 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
SKIV2L-205ENST00000466290 RGPD1P0DJD0 1748 aa13.52□□□□□ -0.25
SKIV2L-205ENST00000466290 COL3A1P02461 1466 aaPredicted RBP13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 MYBBP1AQ9BQG0 1328 aaKnown RBP13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 PLSCR1O15162 318 aa13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 APBA3O96018 575 aa13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 HSP90AB1P08238 724 aaKnown RBP13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
SKIV2L-205ENST00000466290 CYP27B1O15528 508 aa13.49□□□□□ -0.25
SKIV2L-205ENST00000466290 MSH5O43196 834 aa13.49□□□□□ -0.25
SKIV2L-205ENST00000466290 PKD1L3Q7Z443 1732 aa13.48□□□□□ -0.25
SKIV2L-205ENST00000466290 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-205ENST00000466290 HMGB2P26583 209 aaKnown RBP13.48□□□□□ -0.25
SKIV2L-205ENST00000466290 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
SKIV2L-205ENST00000466290 PRKRIP1Q9H875 184 aaPredicted RBP13.48□□□□□ -0.25
SKIV2L-205ENST00000466290 PHKG2P15735 406 aa13.47□□□□□ -0.25
SKIV2L-205ENST00000466290 DEFB132Q7Z7B7 95 aa13.47□□□□□ -0.25
SKIV2L-205ENST00000466290 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
SKIV2L-205ENST00000466290 SBF2Q86WG5 1849 aa13.46□□□□□ -0.25
SKIV2L-205ENST00000466290 FCHSD2O94868 740 aa13.46□□□□□ -0.25
SKIV2L-205ENST00000466290 EN1Q05925 392 aaPredicted RBP13.46□□□□□ -0.25
SKIV2L-205ENST00000466290 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
SKIV2L-205ENST00000466290 PNNQ9H307 717 aaKnown RBP13.46□□□□□ -0.25
SKIV2L-205ENST00000466290 TNS1Q9HBL0 1735 aaKnown RBP13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 KCNQ2O43526 872 aa13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 HMOX1P09601 288 aa13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 ZNF530Q6P9A1 599 aaPredicted RBP13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 ACSBG1Q96GR2 724 aa13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
SKIV2L-205ENST00000466290 SHANK3Q9BYB0 1731 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 ERVV-2B6SEH9 535 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 NEFMP07197 916 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 AKAP4Q5JQC9 854 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 GAS2L2Q8NHY3 880 aa13.44□□□□□ -0.26
SKIV2L-205ENST00000466290 EZH2Q15910 746 aaKnown RBP13.43□□□□□ -0.26
SKIV2L-205ENST00000466290 SYTL4Q96C24 671 aaPredicted RBP13.43□□□□□ -0.26
SKIV2L-205ENST00000466290 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
SKIV2L-205ENST00000466290 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
SKIV2L-205ENST00000466290 ANP32CO43423 234 aa13.42□□□□□ -0.26
SKIV2L-205ENST00000466290 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
SKIV2L-205ENST00000466290 RSPH6AQ9H0K4 717 aa13.42□□□□□ -0.26
SKIV2L-205ENST00000466290 PRKAR2BP31323 418 aa13.41□□□□□ -0.26
SKIV2L-205ENST00000466290 SLC27A3Q5K4L6 730 aa13.41□□□□□ -0.26
SKIV2L-205ENST00000466290 NBPF14Q5TI25 921 aa13.41□□□□□ -0.26
SKIV2L-205ENST00000466290 PTF1AQ7RTS3 328 aa13.41□□□□□ -0.26
SKIV2L-205ENST00000466290 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
SKIV2L-205ENST00000466290 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
SKIV2L-205ENST00000466290 MTHFSDQ2M296 383 aaKnown RBP13.4□□□□□ -0.26
SKIV2L-205ENST00000466290 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
SKIV2L-205ENST00000466290 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
SKIV2L-205ENST00000466290 CABP4P57796 275 aa13.38□□□□□ -0.27
SKIV2L-205ENST00000466290 PIGBQ92521 554 aa13.38□□□□□ -0.27
SKIV2L-205ENST00000466290 DOT1LQ8TEK3 1739 aa13.38□□□□□ -0.27
SKIV2L-205ENST00000466290 BTAF1O14981 1849 aa13.37□□□□□ -0.27
SKIV2L-205ENST00000466290 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
SKIV2L-205ENST00000466290 WDR43Q15061 677 aaKnown RBP eCLIP13.37□□□□□ -0.27
SKIV2L-205ENST00000466290 PROM2Q8N271 834 aa13.37□□□□□ -0.27
SKIV2L-205ENST00000466290 MAP3K5Q99683 1374 aa13.36□□□□□ -0.27
SKIV2L-205ENST00000466290 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
SKIV2L-205ENST00000466290 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
SKIV2L-205ENST00000466290 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
SKIV2L-205ENST00000466290 RREB1Q92766 1687 aa13.35□□□□□ -0.27
SKIV2L-205ENST00000466290 RTF1Q92541 710 aaKnown RBP13.35□□□□□ -0.27
SKIV2L-205ENST00000466290 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
SKIV2L-205ENST00000466290 PLEKHF1Q96S99 279 aa13.35□□□□□ -0.27
SKIV2L-205ENST00000466290 SLC52A2Q9HAB3 445 aa13.35□□□□□ -0.27
SKIV2L-205ENST00000466290 PALLDQ8WX93 1383 aa13.34□□□□□ -0.27
SKIV2L-205ENST00000466290 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
SKIV2L-205ENST00000466290 TOGARAM1Q9Y4F4 1720 aa13.33□□□□□ -0.27
SKIV2L-205ENST00000466290 TEFQ10587 303 aa13.33□□□□□ -0.28
SKIV2L-205ENST00000466290 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms