RNA–Protein interactions for RNA: ENST00000466223.1

AGRN-204, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 459 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-204ENST00000466223 SPG7Q9UQ90 795 aa21.32■■□□□ 1
AGRN-204ENST00000466223 MEGF6O75095 1541 aa21.32■■□□□ 1
AGRN-204ENST00000466223 OVOS2A0A0G2JMS6 1433 aa21.31■■□□□ 1
AGRN-204ENST00000466223 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
AGRN-204ENST00000466223 COL3A1P02461 1466 aaPredicted RBP21.31■■□□□ 1
AGRN-204ENST00000466223 HMOX1P09601 288 aa21.29■■□□□ 1
AGRN-204ENST00000466223 SF3B2Q13435 895 aaKnown RBP21.29■■□□□ 1
AGRN-204ENST00000466223 PLEKHO1Q53GL0 409 aaPredicted RBP21.29■■□□□ 1
AGRN-204ENST00000466223 CCDC125Q86Z20 511 aa21.29■■□□□ 1
AGRN-204ENST00000466223 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
AGRN-204ENST00000466223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 1
AGRN-204ENST00000466223 RGPD1P0DJD0 1748 aa21.29■■□□□ 1
AGRN-204ENST00000466223 U2AF1L5P0DN76 240 aaPredicted RBP21.28■■□□□ 1
AGRN-204ENST00000466223 U2AF1Q01081 240 aaKnown RBP eCLIP21.28■■□□□ 1
AGRN-204ENST00000466223 PCDH11XQ9BZA7 1347 aa21.28■■□□□ 1
AGRN-204ENST00000466223 PCDH11YQ9BZA8 1340 aa21.28■■□□□ 1
AGRN-204ENST00000466223 KDRP35968 1356 aa21.27■■□□□ 1
AGRN-204ENST00000466223 PLEKHG2Q9H7P9 1386 aa21.27■■□□□ 1
AGRN-204ENST00000466223 AMOTQ4VCS5 1084 aa21.27■■□□□ 1
AGRN-204ENST00000466223 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
AGRN-204ENST00000466223 TRIM37O94972 964 aa21.23■□□□□ 0.99
AGRN-204ENST00000466223 IFNL2Q8IZJ0 200 aa21.23■□□□□ 0.99
AGRN-204ENST00000466223 PNNQ9H307 717 aaKnown RBP21.23■□□□□ 0.99
AGRN-204ENST00000466223 PKD1L3Q7Z443 1732 aa21.23■□□□□ 0.99
AGRN-204ENST00000466223 BCL9O00512 1426 aa21.22■□□□□ 0.99
AGRN-204ENST00000466223 FCHSD2O94868 740 aa21.22■□□□□ 0.99
AGRN-204ENST00000466223 NEFMP07197 916 aa21.22■□□□□ 0.99
AGRN-204ENST00000466223 C1orf141Q5JVX7 400 aa21.21■□□□□ 0.99
AGRN-204ENST00000466223 EP400Q96L91 3159 aa21.21■□□□□ 0.99
AGRN-204ENST00000466223 SHANK3Q9BYB0 1731 aa21.21■□□□□ 0.99
AGRN-204ENST00000466223 CYP27B1O15528 508 aa21.2■□□□□ 0.98
AGRN-204ENST00000466223 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
AGRN-204ENST00000466223 WDR43Q15061 677 aaKnown RBP eCLIP21.2■□□□□ 0.98
AGRN-204ENST00000466223 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
AGRN-204ENST00000466223 PRKAR2BP31323 418 aa21.19■□□□□ 0.98
AGRN-204ENST00000466223 ACSBG1Q96GR2 724 aa21.19■□□□□ 0.98
AGRN-204ENST00000466223 BCL11BQ9C0K0 894 aaPredicted RBP21.19■□□□□ 0.98
AGRN-204ENST00000466223 SBF2Q86WG5 1849 aa21.18■□□□□ 0.98
AGRN-204ENST00000466223 PHKG2P15735 406 aa21.18■□□□□ 0.98
AGRN-204ENST00000466223 BAG6P46379 1132 aa21.18■□□□□ 0.98
AGRN-204ENST00000466223 RSPH6AQ9H0K4 717 aa21.18■□□□□ 0.98
AGRN-204ENST00000466223 APBA3O96018 575 aa21.17■□□□□ 0.98
AGRN-204ENST00000466223 SYTL4Q96C24 671 aaPredicted RBP21.17■□□□□ 0.98
AGRN-204ENST00000466223 NKX1-1Q15270 411 aaPredicted RBP21.16■□□□□ 0.98
AGRN-204ENST00000466223 AKAP4Q5JQC9 854 aa21.15■□□□□ 0.98
AGRN-204ENST00000466223 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
AGRN-204ENST00000466223 KCNQ2O43526 872 aa21.14■□□□□ 0.97
AGRN-204ENST00000466223 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.97
AGRN-204ENST00000466223 MTHFSDQ2M296 383 aaKnown RBP21.14■□□□□ 0.97
AGRN-204ENST00000466223 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
AGRN-204ENST00000466223 MAPK8IP3Q9UPT6 1336 aa21.13■□□□□ 0.97
AGRN-204ENST00000466223 DIEXFQ68CQ4 756 aaKnown RBP21.13■□□□□ 0.97
AGRN-204ENST00000466223 MRS2Q9HD23 443 aa21.13■□□□□ 0.97
AGRN-204ENST00000466223 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
AGRN-204ENST00000466223 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
AGRN-204ENST00000466223 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
AGRN-204ENST00000466223 TNS1Q9HBL0 1735 aaKnown RBP21.11■□□□□ 0.97
AGRN-204ENST00000466223 MPRIPQ6WCQ1 1025 aa21.1■□□□□ 0.97
AGRN-204ENST00000466223 DEFB132Q7Z7B7 95 aa21.1■□□□□ 0.97
AGRN-204ENST00000466223 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
AGRN-204ENST00000466223 ERVV-2B6SEH9 535 aa21.09■□□□□ 0.97
AGRN-204ENST00000466223 EN1Q05925 392 aaPredicted RBP21.09■□□□□ 0.97
AGRN-204ENST00000466223 TMOD3Q9NYL9 352 aa21.09■□□□□ 0.97
AGRN-204ENST00000466223 ADAMTS8Q9UP79 889 aa21.09■□□□□ 0.97
AGRN-204ENST00000466223 PLSCR1O15162 318 aa21.08■□□□□ 0.97
AGRN-204ENST00000466223 PTF1AQ7RTS3 328 aa21.08■□□□□ 0.97
AGRN-204ENST00000466223 CABP4P57796 275 aa21.07■□□□□ 0.96
AGRN-204ENST00000466223 CCDC184Q52MB2 194 aa21.07■□□□□ 0.96
AGRN-204ENST00000466223 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
AGRN-204ENST00000466223 PLEKHF1Q96S99 279 aa21.06■□□□□ 0.96
AGRN-204ENST00000466223 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
AGRN-204ENST00000466223 BTAF1O14981 1849 aa21.06■□□□□ 0.96
AGRN-204ENST00000466223 RUNDC1Q96C34 613 aa21.05■□□□□ 0.96
AGRN-204ENST00000466223 ITGB4P16144 1822 aa21.05■□□□□ 0.96
AGRN-204ENST00000466223 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
AGRN-204ENST00000466223 EZH2Q15910 746 aaKnown RBP21.04■□□□□ 0.96
AGRN-204ENST00000466223 CAMKK2Q96RR4 588 aa21.04■□□□□ 0.96
AGRN-204ENST00000466223 TOGARAM1Q9Y4F4 1720 aa21.04■□□□□ 0.96
AGRN-204ENST00000466223 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
AGRN-204ENST00000466223 CCDC146Q8IYE0 955 aa21.03■□□□□ 0.96
AGRN-204ENST00000466223 PNISRQ8TF01 805 aaKnown RBP21.03■□□□□ 0.96
AGRN-204ENST00000466223 PIGBQ92521 554 aa21.03■□□□□ 0.96
AGRN-204ENST00000466223 SMARCC1Q92922 1105 aaPredicted RBP21.03■□□□□ 0.96
AGRN-204ENST00000466223 LGR6Q9HBX8 967 aa21.03■□□□□ 0.96
AGRN-204ENST00000466223 KDM6AO15550 1401 aaPredicted RBP21.03■□□□□ 0.96
AGRN-204ENST00000466223 SCN11AQ9UI33 1791 aa21.02■□□□□ 0.96
AGRN-204ENST00000466223 HTATSF1O43719 755 aaKnown RBP21.02■□□□□ 0.96
AGRN-204ENST00000466223 NFATC2IPQ8NCF5 419 aa21.02■□□□□ 0.96
AGRN-204ENST00000466223 TEFQ10587 303 aa21.01■□□□□ 0.95
AGRN-204ENST00000466223 SRCAPQ6ZRS2 3230 aa21■□□□□ 0.95
AGRN-204ENST00000466223 VIRMAQ69YN4 1812 aaKnown RBP21■□□□□ 0.95
AGRN-204ENST00000466223 SLC52A2Q9HAB3 445 aa21■□□□□ 0.95
AGRN-204ENST00000466223 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
AGRN-204ENST00000466223 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
AGRN-204ENST00000466223 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
AGRN-204ENST00000466223 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
AGRN-204ENST00000466223 RIPK4P57078 832 aa20.99■□□□□ 0.95
AGRN-204ENST00000466223 TXNRD1Q16881 649 aa20.99■□□□□ 0.95
AGRN-204ENST00000466223 IL17REQ8NFR9 667 aa20.99■□□□□ 0.95
AGRN-204ENST00000466223 TMPOP42166 694 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms