RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 INSRP06213 1382 aa17.82■□□□□ 0.44
SRM-203ENST00000465788 FLT4P35916 1363 aa17.82■□□□□ 0.44
SRM-203ENST00000465788 DOT1LQ8TEK3 1739 aa17.82■□□□□ 0.44
SRM-203ENST00000465788 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
SRM-203ENST00000465788 RRS1Q15050 365 aaKnown RBP17.81■□□□□ 0.44
SRM-203ENST00000465788 SHANK3Q9BYB0 1731 aa17.81■□□□□ 0.44
SRM-203ENST00000465788 TATP17735 454 aaPredicted RBP17.8■□□□□ 0.44
SRM-203ENST00000465788 SYTL4Q96C24 671 aaPredicted RBP17.8■□□□□ 0.44
SRM-203ENST00000465788 MEGF6O75095 1541 aa17.8■□□□□ 0.44
SRM-203ENST00000465788 LY75O60449 1722 aa17.8■□□□□ 0.44
SRM-203ENST00000465788 PRIM1P49642 420 aaKnown RBP17.79■□□□□ 0.44
SRM-203ENST00000465788 SGIP1Q9BQI5 828 aa17.79■□□□□ 0.44
SRM-203ENST00000465788 LRRC4BQ9NT99 713 aa17.79■□□□□ 0.44
SRM-203ENST00000465788 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
SRM-203ENST00000465788 FBLN1P23142 703 aa17.78■□□□□ 0.44
SRM-203ENST00000465788 NBPF6Q5VWK0 638 aa17.78■□□□□ 0.44
SRM-203ENST00000465788 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
SRM-203ENST00000465788 NBPF4Q96M43 638 aa17.78■□□□□ 0.44
SRM-203ENST00000465788 ARXQ96QS3 562 aa17.78■□□□□ 0.44
SRM-203ENST00000465788 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
SRM-203ENST00000465788 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
SRM-203ENST00000465788 ZNF827Q17R98 1081 aa17.77■□□□□ 0.44
SRM-203ENST00000465788 SYT17Q9BSW7 474 aa17.77■□□□□ 0.44
SRM-203ENST00000465788 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.44
SRM-203ENST00000465788 NSD3Q9BZ95 1437 aa17.76■□□□□ 0.43
SRM-203ENST00000465788 POLD1P28340 1107 aa17.76■□□□□ 0.43
SRM-203ENST00000465788 HSP90AB2PQ58FF8 381 aa17.75■□□□□ 0.43
SRM-203ENST00000465788 TFCP2L1Q9NZI6 479 aa17.75■□□□□ 0.43
SRM-203ENST00000465788 NSD2O96028 1365 aa17.75■□□□□ 0.43
SRM-203ENST00000465788 ANKRD26Q9UPS8 1709 aa17.74■□□□□ 0.43
SRM-203ENST00000465788 COL24A1Q17RW2 1714 aa17.73■□□□□ 0.43
SRM-203ENST00000465788 CHD4Q14839 1912 aa17.73■□□□□ 0.43
SRM-203ENST00000465788 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
SRM-203ENST00000465788 CARD14Q9BXL6 1004 aa17.73■□□□□ 0.43
SRM-203ENST00000465788 CCNL1Q9UK58 526 aaPredicted RBP17.73■□□□□ 0.43
SRM-203ENST00000465788 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
SRM-203ENST00000465788 TUBGCP6Q96RT7 1819 aa17.72■□□□□ 0.43
SRM-203ENST00000465788 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
SRM-203ENST00000465788 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
SRM-203ENST00000465788 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
SRM-203ENST00000465788 PLEKHG2Q9H7P9 1386 aa17.7■□□□□ 0.42
SRM-203ENST00000465788 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
SRM-203ENST00000465788 EMILIN1Q9Y6C2 1016 aa17.7■□□□□ 0.42
SRM-203ENST00000465788 WASHC2AQ641Q2 1341 aa17.7■□□□□ 0.42
SRM-203ENST00000465788 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
SRM-203ENST00000465788 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
SRM-203ENST00000465788 PCGF6Q9BYE7 350 aa17.68■□□□□ 0.42
SRM-203ENST00000465788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
SRM-203ENST00000465788 C5P01031 1676 aa17.67■□□□□ 0.42
SRM-203ENST00000465788 PPM1GO15355 546 aaPredicted RBP17.67■□□□□ 0.42
SRM-203ENST00000465788 EIF4G2P78344 907 aaKnown RBP eCLIP17.67■□□□□ 0.42
SRM-203ENST00000465788 ITGB4P16144 1822 aa17.67■□□□□ 0.42
SRM-203ENST00000465788 PALLDQ8WX93 1383 aa17.66■□□□□ 0.42
SRM-203ENST00000465788 TAF1LQ8IZX4 1826 aa17.66■□□□□ 0.42
SRM-203ENST00000465788 CYP27B1O15528 508 aa17.65■□□□□ 0.42
SRM-203ENST00000465788 KCNQ4P56696 695 aa17.65■□□□□ 0.42
SRM-203ENST00000465788 NKX1-1Q15270 411 aaPredicted RBP17.65■□□□□ 0.42
SRM-203ENST00000465788 MPRIPQ6WCQ1 1025 aa17.65■□□□□ 0.42
SRM-203ENST00000465788 MSH5O43196 834 aa17.64■□□□□ 0.41
SRM-203ENST00000465788 GPR162Q16538 588 aa17.63■□□□□ 0.41
SRM-203ENST00000465788 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
SRM-203ENST00000465788 POLKQ9UBT6 870 aa17.63■□□□□ 0.41
SRM-203ENST00000465788 TOGARAM1Q9Y4F4 1720 aa17.63■□□□□ 0.41
SRM-203ENST00000465788 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
SRM-203ENST00000465788 EYA1Q99502 592 aa17.62■□□□□ 0.41
SRM-203ENST00000465788 COL23A1Q86Y22 540 aaPredicted RBP17.61■□□□□ 0.41
SRM-203ENST00000465788 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
SRM-203ENST00000465788 AK7Q96M32 723 aa17.6■□□□□ 0.41
SRM-203ENST00000465788 C4BP0C0L5 1744 aa17.6■□□□□ 0.41
SRM-203ENST00000465788 ZNF784Q8NCA9 323 aaPredicted RBP17.59■□□□□ 0.41
SRM-203ENST00000465788 TMOD3Q9NYL9 352 aa17.59■□□□□ 0.41
SRM-203ENST00000465788 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
SRM-203ENST00000465788 HSPA5P11021 654 aaKnown RBP17.58■□□□□ 0.4
SRM-203ENST00000465788 PIGBQ92521 554 aa17.58■□□□□ 0.4
SRM-203ENST00000465788 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
SRM-203ENST00000465788 PHKG2P15735 406 aa17.57■□□□□ 0.4
SRM-203ENST00000465788 EIF4A2Q14240 407 aaKnown RBP17.57■□□□□ 0.4
SRM-203ENST00000465788 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
SRM-203ENST00000465788 UBR3Q6ZT12 1888 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 SSFA2P28290 1259 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 SIK1P57059 783 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 PANK3Q9H999 370 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
SRM-203ENST00000465788 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
SRM-203ENST00000465788 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
SRM-203ENST00000465788 ERVV-2B6SEH9 535 aa17.54■□□□□ 0.4
SRM-203ENST00000465788 AMOTQ4VCS5 1084 aa17.54■□□□□ 0.4
SRM-203ENST00000465788 PLEKHO1Q53GL0 409 aaPredicted RBP17.54■□□□□ 0.4
SRM-203ENST00000465788 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
SRM-203ENST00000465788 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
SRM-203ENST00000465788 NLGN2Q8NFZ4 835 aa17.53■□□□□ 0.4
SRM-203ENST00000465788 KNSTRNQ9Y448 316 aa17.53■□□□□ 0.4
SRM-203ENST00000465788 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.4
SRM-203ENST00000465788 DCAF5Q96JK2 942 aa17.52■□□□□ 0.4
SRM-203ENST00000465788 UTRNP46939 3433 aa17.52■□□□□ 0.4
SRM-203ENST00000465788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
SRM-203ENST00000465788 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
SRM-203ENST00000465788 ASAP1Q9ULH1 1129 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms