RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 ADAMTS8Q9UP79 889 aa19.55■□□□□ 0.72
HLA-F-223ENST00000465459 MEGF6O75095 1541 aa19.55■□□□□ 0.72
HLA-F-223ENST00000465459 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
HLA-F-223ENST00000465459 THSD7AQ9UPZ6 1657 aa19.54■□□□□ 0.72
HLA-F-223ENST00000465459 PARP4Q9UKK3 1724 aaKnown RBP19.54■□□□□ 0.72
HLA-F-223ENST00000465459 EXOC5O00471 708 aa19.53■□□□□ 0.72
HLA-F-223ENST00000465459 NEFMP07197 916 aa19.53■□□□□ 0.72
HLA-F-223ENST00000465459 PRKAR2BP31323 418 aa19.53■□□□□ 0.72
HLA-F-223ENST00000465459 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
HLA-F-223ENST00000465459 SEPT12Q8IYM1 358 aa19.53■□□□□ 0.72
HLA-F-223ENST00000465459 SPG7Q9UQ90 795 aa19.53■□□□□ 0.72
HLA-F-223ENST00000465459 DDB1Q16531 1140 aa19.52■□□□□ 0.72
HLA-F-223ENST00000465459 ZCRB1Q8TBF4 217 aaKnown RBP19.52■□□□□ 0.72
HLA-F-223ENST00000465459 PLEKHF1Q96S99 279 aa19.51■□□□□ 0.71
HLA-F-223ENST00000465459 TNS2Q63HR2 1409 aa19.51■□□□□ 0.71
HLA-F-223ENST00000465459 A0A0G2JS52 829 aa19.5■□□□□ 0.71
HLA-F-223ENST00000465459 MYT1Q01538 1121 aa19.5■□□□□ 0.71
HLA-F-223ENST00000465459 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
HLA-F-223ENST00000465459 PCDH11XQ9BZA7 1347 aa19.49■□□□□ 0.71
HLA-F-223ENST00000465459 PCDH11YQ9BZA8 1340 aa19.49■□□□□ 0.71
HLA-F-223ENST00000465459 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
HLA-F-223ENST00000465459 PKD1L3Q7Z443 1732 aa19.48■□□□□ 0.71
HLA-F-223ENST00000465459 PDE3BQ13370 1112 aa19.48■□□□□ 0.71
HLA-F-223ENST00000465459 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
HLA-F-223ENST00000465459 GAS2L2Q8NHY3 880 aa19.48■□□□□ 0.71
HLA-F-223ENST00000465459 LRRC37A3O60309 1634 aa19.47■□□□□ 0.71
HLA-F-223ENST00000465459 PHACTR3Q96KR7 559 aa19.47■□□□□ 0.71
HLA-F-223ENST00000465459 RGS12O14924 1447 aa19.47■□□□□ 0.71
HLA-F-223ENST00000465459 MTHFSDQ2M296 383 aaKnown RBP19.45■□□□□ 0.7
HLA-F-223ENST00000465459 IFNL2Q8IZJ0 200 aa19.45■□□□□ 0.7
HLA-F-223ENST00000465459 HSP90AB1P08238 724 aaKnown RBP19.44■□□□□ 0.7
HLA-F-223ENST00000465459 AKAP4Q5JQC9 854 aa19.44■□□□□ 0.7
HLA-F-223ENST00000465459 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
HLA-F-223ENST00000465459 ZNF530Q6P9A1 599 aaPredicted RBP19.44■□□□□ 0.7
HLA-F-223ENST00000465459 KRT27Q7Z3Y8 459 aa19.44■□□□□ 0.7
HLA-F-223ENST00000465459 CYP27B1O15528 508 aa19.43■□□□□ 0.7
HLA-F-223ENST00000465459 PHKG2P15735 406 aa19.43■□□□□ 0.7
HLA-F-223ENST00000465459 NKX1-1Q15270 411 aaPredicted RBP19.43■□□□□ 0.7
HLA-F-223ENST00000465459 NFE2L2Q16236 605 aa19.43■□□□□ 0.7
HLA-F-223ENST00000465459 CCDC146Q8IYE0 955 aa19.43■□□□□ 0.7
HLA-F-223ENST00000465459 MARCH10Q8NA82 808 aaPredicted RBP19.43■□□□□ 0.7
HLA-F-223ENST00000465459 DDX54Q8TDD1 881 aaKnown RBP19.43■□□□□ 0.7
HLA-F-223ENST00000465459 BCL9O00512 1426 aa19.42■□□□□ 0.7
HLA-F-223ENST00000465459 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
HLA-F-223ENST00000465459 HTATSF1O43719 755 aaKnown RBP19.41■□□□□ 0.7
HLA-F-223ENST00000465459 NGEFQ8N5V2 710 aa19.41■□□□□ 0.7
HLA-F-223ENST00000465459 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
HLA-F-223ENST00000465459 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
HLA-F-223ENST00000465459 TMPOP42166 694 aaKnown RBP19.4■□□□□ 0.7
HLA-F-223ENST00000465459 BRWD3Q6RI45 1802 aa19.39■□□□□ 0.7
HLA-F-223ENST00000465459 DCAF5Q96JK2 942 aa19.39■□□□□ 0.69
HLA-F-223ENST00000465459 MAP3K5Q99683 1374 aa19.39■□□□□ 0.69
HLA-F-223ENST00000465459 APAF1O14727 1248 aa19.38■□□□□ 0.69
HLA-F-223ENST00000465459 LMOD3Q0VAK6 560 aa19.38■□□□□ 0.69
HLA-F-223ENST00000465459 FAM196AQ6ZSG2 479 aa19.38■□□□□ 0.69
HLA-F-223ENST00000465459 RIPK4P57078 832 aa19.37■□□□□ 0.69
HLA-F-223ENST00000465459 RTF1Q92541 710 aaKnown RBP19.36■□□□□ 0.69
HLA-F-223ENST00000465459 ERVV-2B6SEH9 535 aa19.35■□□□□ 0.69
HLA-F-223ENST00000465459 CCDC27Q2M243 656 aa19.34■□□□□ 0.69
HLA-F-223ENST00000465459 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.68
HLA-F-223ENST00000465459 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
HLA-F-223ENST00000465459 ADAMTS7Q9UKP4 1686 aa19.33■□□□□ 0.68
HLA-F-223ENST00000465459 KDM6AO15550 1401 aaPredicted RBP19.33■□□□□ 0.68
HLA-F-223ENST00000465459 CEMIPQ8WUJ3 1361 aa19.32■□□□□ 0.68
HLA-F-223ENST00000465459 NEUROD2Q15784 382 aa19.32■□□□□ 0.68
HLA-F-223ENST00000465459 IL17REQ8NFR9 667 aa19.32■□□□□ 0.68
HLA-F-223ENST00000465459 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
HLA-F-223ENST00000465459 TRIM35Q9UPQ4 493 aa19.31■□□□□ 0.68
HLA-F-223ENST00000465459 DLG5Q8TDM6 1919 aa19.31■□□□□ 0.68
HLA-F-223ENST00000465459 FAM182BQ5T319 152 aa19.3■□□□□ 0.68
HLA-F-223ENST00000465459 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
HLA-F-223ENST00000465459 SCN11AQ9UI33 1791 aa19.29■□□□□ 0.68
HLA-F-223ENST00000465459 CALD1Q05682 793 aaKnown RBP19.29■□□□□ 0.68
HLA-F-223ENST00000465459 MRC1P22897 1456 aa19.28■□□□□ 0.68
HLA-F-223ENST00000465459 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
HLA-F-223ENST00000465459 CABP4P57796 275 aa19.28■□□□□ 0.68
HLA-F-223ENST00000465459 TEFQ10587 303 aa19.28■□□□□ 0.68
HLA-F-223ENST00000465459 MCM10Q7L590 875 aa19.28■□□□□ 0.68
HLA-F-223ENST00000465459 BCL11BQ9C0K0 894 aaPredicted RBP19.28■□□□□ 0.68
HLA-F-223ENST00000465459 SLC52A2Q9HAB3 445 aa19.28■□□□□ 0.68
HLA-F-223ENST00000465459 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
HLA-F-223ENST00000465459 TMOD3Q9NYL9 352 aa19.27■□□□□ 0.68
HLA-F-223ENST00000465459 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
HLA-F-223ENST00000465459 ACSBG1Q96GR2 724 aa19.26■□□□□ 0.67
HLA-F-223ENST00000465459 DOT1LQ8TEK3 1739 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 TOGARAM1Q9Y4F4 1720 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 KAT6BQ8WYB5 2073 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 NHSQ6T4R5 1651 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 WDR63Q8IWG1 891 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 BABAM1Q9NWV8 329 aa19.25■□□□□ 0.67
HLA-F-223ENST00000465459 KCNQ2O43526 872 aa19.24■□□□□ 0.67
HLA-F-223ENST00000465459 TAF7Q15545 349 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-223ENST00000465459 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
HLA-F-223ENST00000465459 PIGBQ92521 554 aa19.24■□□□□ 0.67
HLA-F-223ENST00000465459 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
HLA-F-223ENST00000465459 IL16Q14005 1332 aa19.24■□□□□ 0.67
HLA-F-223ENST00000465459 TRIM37O94972 964 aa19.23■□□□□ 0.67
HLA-F-223ENST00000465459 HNRNPUQ00839 825 aaKnown RBP eCLIP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms