RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 MEGF6O75095 1541 aa20.09■□□□□ 0.81
GYPC-205ENST00000464053 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
GYPC-205ENST00000464053 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
GYPC-205ENST00000464053 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
GYPC-205ENST00000464053 ZNF853P0CG23 659 aa20.08■□□□□ 0.8
GYPC-205ENST00000464053 EVA1CP58658 441 aa20.08■□□□□ 0.8
GYPC-205ENST00000464053 IRX6P78412 446 aaPredicted RBP20.08■□□□□ 0.8
GYPC-205ENST00000464053 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.8
GYPC-205ENST00000464053 MAP3K5Q99683 1374 aa20.08■□□□□ 0.8
GYPC-205ENST00000464053 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
GYPC-205ENST00000464053 RTF1Q92541 710 aaKnown RBP20.07■□□□□ 0.8
GYPC-205ENST00000464053 IFT57Q9NWB7 429 aa20.07■□□□□ 0.8
GYPC-205ENST00000464053 CRB1P82279 1406 aa20.07■□□□□ 0.8
GYPC-205ENST00000464053 FKBP8Q14318 412 aa20.06■□□□□ 0.8
GYPC-205ENST00000464053 AMOTQ4VCS5 1084 aa20.06■□□□□ 0.8
GYPC-205ENST00000464053 PLCH1Q4KWH8 1693 aa20.06■□□□□ 0.8
GYPC-205ENST00000464053 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
GYPC-205ENST00000464053 GNAI1P63096 354 aa20.06■□□□□ 0.8
GYPC-205ENST00000464053 EXOSC9Q06265 439 aaKnown RBP20.06■□□□□ 0.8
GYPC-205ENST00000464053 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
GYPC-205ENST00000464053 CFAP44Q96MT7 982 aa20.06■□□□□ 0.8
GYPC-205ENST00000464053 JCADQ9P266 1359 aa20.06■□□□□ 0.8
GYPC-205ENST00000464053 TATP17735 454 aaPredicted RBP20.05■□□□□ 0.8
GYPC-205ENST00000464053 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
GYPC-205ENST00000464053 CARD10Q9BWT7 1032 aa20.05■□□□□ 0.8
GYPC-205ENST00000464053 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
GYPC-205ENST00000464053 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
GYPC-205ENST00000464053 NEFLP07196 543 aa20.04■□□□□ 0.8
GYPC-205ENST00000464053 HSPA1LP34931 641 aa20.04■□□□□ 0.8
GYPC-205ENST00000464053 RRP1P56182 461 aaKnown RBP20.03■□□□□ 0.8
GYPC-205ENST00000464053 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
GYPC-205ENST00000464053 LGR6Q9HBX8 967 aa20.02■□□□□ 0.8
GYPC-205ENST00000464053 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
GYPC-205ENST00000464053 CHL1O00533 1208 aa20.02■□□□□ 0.79
GYPC-205ENST00000464053 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
GYPC-205ENST00000464053 USP35Q9P2H5 1018 aa20.01■□□□□ 0.79
GYPC-205ENST00000464053 NRAPQ86VF7 1730 aa20■□□□□ 0.79
GYPC-205ENST00000464053 PARP4Q9UKK3 1724 aaKnown RBP20■□□□□ 0.79
GYPC-205ENST00000464053 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
GYPC-205ENST00000464053 PLIN1O60240 522 aa20■□□□□ 0.79
GYPC-205ENST00000464053 BCAR3O75815 825 aa20■□□□□ 0.79
GYPC-205ENST00000464053 C1orf141Q5JVX7 400 aa20■□□□□ 0.79
GYPC-205ENST00000464053 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
GYPC-205ENST00000464053 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
GYPC-205ENST00000464053 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
GYPC-205ENST00000464053 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.79
GYPC-205ENST00000464053 SPG7Q9UQ90 795 aa19.99■□□□□ 0.79
GYPC-205ENST00000464053 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
GYPC-205ENST00000464053 PLEKHG2Q9H7P9 1386 aa19.98■□□□□ 0.79
GYPC-205ENST00000464053 IL2RBP14784 551 aa19.97■□□□□ 0.79
GYPC-205ENST00000464053 TSPYL6Q8N831 410 aa19.97■□□□□ 0.79
GYPC-205ENST00000464053 LRP6O75581 1613 aa19.97■□□□□ 0.79
GYPC-205ENST00000464053 RNMTO43148 476 aaKnown RBP19.97■□□□□ 0.79
GYPC-205ENST00000464053 PHKG2P15735 406 aa19.97■□□□□ 0.79
GYPC-205ENST00000464053 SLIT2O94813 1529 aa19.96■□□□□ 0.79
GYPC-205ENST00000464053 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
GYPC-205ENST00000464053 CYP27B1O15528 508 aa19.96■□□□□ 0.79
GYPC-205ENST00000464053 CT47B1P0C2W7 299 aaPredicted RBP19.96■□□□□ 0.79
GYPC-205ENST00000464053 C8orf58Q8NAV2 365 aa19.96■□□□□ 0.79
GYPC-205ENST00000464053 ADAMTS7Q9UKP4 1686 aa19.96■□□□□ 0.79
GYPC-205ENST00000464053 SPATA31A6Q5VVP1 1343 aa19.95■□□□□ 0.78
GYPC-205ENST00000464053 TSPYL4Q9UJ04 414 aa19.95■□□□□ 0.78
GYPC-205ENST00000464053 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
GYPC-205ENST00000464053 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
GYPC-205ENST00000464053 KRT24Q2M2I5 525 aa19.95■□□□□ 0.78
GYPC-205ENST00000464053 BCL2L13Q9BXK5 485 aa19.95■□□□□ 0.78
GYPC-205ENST00000464053 SHANK3Q9BYB0 1731 aa19.94■□□□□ 0.78
GYPC-205ENST00000464053 IFNL2Q8IZJ0 200 aa19.94■□□□□ 0.78
GYPC-205ENST00000464053 ZCRB1Q8TBF4 217 aaKnown RBP19.94■□□□□ 0.78
GYPC-205ENST00000464053 C8orf37Q96NL8 207 aa19.94■□□□□ 0.78
GYPC-205ENST00000464053 SCN11AQ9UI33 1791 aa19.94■□□□□ 0.78
GYPC-205ENST00000464053 KDM6AO15550 1401 aaPredicted RBP19.93■□□□□ 0.78
GYPC-205ENST00000464053 VAMP4O75379 141 aa19.93■□□□□ 0.78
GYPC-205ENST00000464053 TWISTNBQ3B726 338 aaPredicted RBP19.92■□□□□ 0.78
GYPC-205ENST00000464053 DISP2A7MBM2 1401 aa19.92■□□□□ 0.78
GYPC-205ENST00000464053 SIPA1L3O60292 1781 aaPredicted RBP19.91■□□□□ 0.78
GYPC-205ENST00000464053 C20orf194Q5TEA3 1177 aa19.91■□□□□ 0.78
GYPC-205ENST00000464053 SSH1Q8WYL5 1049 aa19.91■□□□□ 0.78
GYPC-205ENST00000464053 NGLY1Q96IV0 654 aa19.91■□□□□ 0.78
GYPC-205ENST00000464053 WNK3Q9BYP7 1800 aa19.91■□□□□ 0.78
GYPC-205ENST00000464053 SPATA31A1Q5TZJ5 1347 aa19.91■□□□□ 0.78
GYPC-205ENST00000464053 TEFQ10587 303 aa19.9■□□□□ 0.78
GYPC-205ENST00000464053 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
GYPC-205ENST00000464053 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
GYPC-205ENST00000464053 BABAM1Q9NWV8 329 aa19.9■□□□□ 0.78
GYPC-205ENST00000464053 KDM3BQ7LBC6 1761 aa19.89■□□□□ 0.78
GYPC-205ENST00000464053 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.78
GYPC-205ENST00000464053 UNC5CLQ8IV45 518 aa19.88■□□□□ 0.77
GYPC-205ENST00000464053 SMC4Q9NTJ3 1288 aa19.88■□□□□ 0.77
GYPC-205ENST00000464053 SPATA31A5Q5VU36 1347 aa19.88■□□□□ 0.77
GYPC-205ENST00000464053 SPATA31A7Q8IWB4 1347 aa19.88■□□□□ 0.77
GYPC-205ENST00000464053 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.88■□□□□ 0.77
GYPC-205ENST00000464053 DDX54Q8TDD1 881 aaKnown RBP19.88■□□□□ 0.77
GYPC-205ENST00000464053 FRAT1Q92837 279 aaPredicted RBP19.88■□□□□ 0.77
GYPC-205ENST00000464053 DCAF5Q96JK2 942 aa19.88■□□□□ 0.77
GYPC-205ENST00000464053 BTBD11A6QL63 1104 aa19.87■□□□□ 0.77
GYPC-205ENST00000464053 KCNQ3O43525 872 aa19.87■□□□□ 0.77
GYPC-205ENST00000464053 FNBP4Q8N3X1 1017 aaPredicted RBP19.87■□□□□ 0.77
GYPC-205ENST00000464053 TCERG1O14776 1098 aaKnown RBP19.86■□□□□ 0.77
GYPC-205ENST00000464053 HSP90AB1P08238 724 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms