RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 IL13P35225 146 aa35.29■■■■□ 3.24
SURF1-203ENST00000463965 SPG7Q9UQ90 795 aa35.28■■■■□ 3.24
SURF1-203ENST00000463965 DIAPH1O60610 1272 aaKnown RBP35.27■■■■□ 3.24
SURF1-203ENST00000463965 CFAP53Q96M91 514 aa35.27■■■■□ 3.24
SURF1-203ENST00000463965 PCDH11XQ9BZA7 1347 aa35.27■■■■□ 3.24
SURF1-203ENST00000463965 PCDH11YQ9BZA8 1340 aa35.27■■■■□ 3.24
SURF1-203ENST00000463965 EN1Q05925 392 aaPredicted RBP35.26■■■■□ 3.24
SURF1-203ENST00000463965 TNS1Q9HBL0 1735 aaKnown RBP35.24■■■■□ 3.23
SURF1-203ENST00000463965 PPP2R1AP30153 589 aa35.24■■■■□ 3.23
SURF1-203ENST00000463965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.24■■■■□ 3.23
SURF1-203ENST00000463965 ACSBG1Q96GR2 724 aa35.23■■■■□ 3.23
SURF1-203ENST00000463965 SULT6B1Q6IMI4 303 aa35.22■■■■□ 3.23
SURF1-203ENST00000463965 SBF2Q86WG5 1849 aa35.22■■■■□ 3.23
SURF1-203ENST00000463965 PLEKHG2Q9H7P9 1386 aa35.21■■■■□ 3.23
SURF1-203ENST00000463965 ZNF316A6NFI3 1004 aaPredicted RBP35.2■■■■□ 3.23
SURF1-203ENST00000463965 KAT6BQ8WYB5 2073 aa35.2■■■■□ 3.22
SURF1-203ENST00000463965 PARD3Q8TEW0 1356 aa35.19■■■■□ 3.22
SURF1-203ENST00000463965 KCNQ2O43526 872 aa35.17■■■■□ 3.22
SURF1-203ENST00000463965 EZH2Q15910 746 aaKnown RBP35.17■■■■□ 3.22
SURF1-203ENST00000463965 PLEKHO1Q53GL0 409 aaPredicted RBP35.17■■■■□ 3.22
SURF1-203ENST00000463965 AEBP1Q8IUX7 1158 aa35.17■■■■□ 3.22
SURF1-203ENST00000463965 CAMKK2Q96RR4 588 aa35.17■■■■□ 3.22
SURF1-203ENST00000463965 RALBP1Q15311 655 aa35.16■■■■□ 3.22
SURF1-203ENST00000463965 PTF1AQ7RTS3 328 aa35.16■■■■□ 3.22
SURF1-203ENST00000463965 PLSCR1O15162 318 aa35.15■■■■□ 3.22
SURF1-203ENST00000463965 CYP27B1O15528 508 aa35.15■■■■□ 3.22
SURF1-203ENST00000463965 AMOTQ4VCS5 1084 aa35.15■■■■□ 3.22
SURF1-203ENST00000463965 SHANK3Q9BYB0 1731 aa35.15■■■■□ 3.22
SURF1-203ENST00000463965 SYTL4Q96C24 671 aaPredicted RBP35.14■■■■□ 3.22
SURF1-203ENST00000463965 NUDCQ9Y266 331 aa35.14■■■■□ 3.22
SURF1-203ENST00000463965 KDRP35968 1356 aa35.13■■■■□ 3.21
SURF1-203ENST00000463965 PKD1L3Q7Z443 1732 aa35.13■■■■□ 3.21
SURF1-203ENST00000463965 U2SURPO15042 1029 aaKnown RBP35.13■■■■□ 3.21
SURF1-203ENST00000463965 IFNL2Q8IZJ0 200 aa35.13■■■■□ 3.21
SURF1-203ENST00000463965 NHSQ6T4R5 1651 aa35.11■■■■□ 3.21
SURF1-203ENST00000463965 PRIM1P49642 420 aaKnown RBP35.11■■■■□ 3.21
SURF1-203ENST00000463965 COL3A1P02461 1466 aaPredicted RBP35.1■■■■□ 3.21
SURF1-203ENST00000463965 HMOX1P09601 288 aa35.1■■■■□ 3.21
SURF1-203ENST00000463965 PHKG2P15735 406 aa35.07■■■■□ 3.2
SURF1-203ENST00000463965 NKX1-1Q15270 411 aaPredicted RBP35.07■■■■□ 3.2
SURF1-203ENST00000463965 HSP90AB1P08238 724 aaKnown RBP35.06■■■■□ 3.2
SURF1-203ENST00000463965 ZNF530Q6P9A1 599 aaPredicted RBP35.06■■■■□ 3.2
SURF1-203ENST00000463965 C1orf141Q5JVX7 400 aa35.04■■■■□ 3.2
SURF1-203ENST00000463965 DOT1LQ8TEK3 1739 aa35.02■■■■□ 3.2
SURF1-203ENST00000463965 RGPD3A6NKT7 1758 aaPredicted RBP35■■■■□ 3.19
SURF1-203ENST00000463965 RGPD4Q7Z3J3 1758 aa35■■■■□ 3.19
SURF1-203ENST00000463965 NBPF14Q5TI25 921 aa35■■■■□ 3.19
SURF1-203ENST00000463965 U2AF1L5P0DN76 240 aaPredicted RBP34.99■■■■□ 3.19
SURF1-203ENST00000463965 U2AF1Q01081 240 aaKnown RBP eCLIP34.99■■■■□ 3.19
SURF1-203ENST00000463965 BTAF1O14981 1849 aa34.99■■■■□ 3.19
SURF1-203ENST00000463965 TXNRD1Q16881 649 aa34.98■■■■□ 3.19
SURF1-203ENST00000463965 MPRIPQ6WCQ1 1025 aa34.98■■■■□ 3.19
SURF1-203ENST00000463965 MYBBP1AQ9BQG0 1328 aaKnown RBP34.98■■■■□ 3.19
SURF1-203ENST00000463965 DCAF5Q96JK2 942 aa34.97■■■■□ 3.19
SURF1-203ENST00000463965 PROM2Q8N271 834 aa34.95■■■■□ 3.19
SURF1-203ENST00000463965 TMOD3Q9NYL9 352 aa34.94■■■■□ 3.18
SURF1-203ENST00000463965 RREB1Q92766 1687 aa34.94■■■■□ 3.18
SURF1-203ENST00000463965 AKAP4Q5JQC9 854 aa34.93■■■■□ 3.18
SURF1-203ENST00000463965 PRKRIP1Q9H875 184 aaPredicted RBP34.93■■■■□ 3.18
SURF1-203ENST00000463965 ERVV-2B6SEH9 535 aa34.92■■■■□ 3.18
SURF1-203ENST00000463965 FCHSD2O94868 740 aa34.9■■■■□ 3.18
SURF1-203ENST00000463965 SLC27A3Q5K4L6 730 aa34.9■■■■□ 3.18
SURF1-203ENST00000463965 PRKAR2BP31323 418 aa34.89■■■■□ 3.18
SURF1-203ENST00000463965 MTHFSDQ2M296 383 aaKnown RBP34.89■■■■□ 3.18
SURF1-203ENST00000463965 GAS2L2Q8NHY3 880 aa34.89■■■■□ 3.18
SURF1-203ENST00000463965 PIGBQ92521 554 aa34.89■■■■□ 3.18
SURF1-203ENST00000463965 SMARCC1Q92922 1105 aaPredicted RBP34.89■■■■□ 3.18
SURF1-203ENST00000463965 RSPH6AQ9H0K4 717 aa34.89■■■■□ 3.18
SURF1-203ENST00000463965 NUP188Q5SRE5 1749 aa34.88■■■■□ 3.17
SURF1-203ENST00000463965 R3HDM1Q15032 1099 aaKnown RBP34.87■■■■□ 3.17
SURF1-203ENST00000463965 TOGARAM1Q9Y4F4 1720 aa34.86■■■■□ 3.17
SURF1-203ENST00000463965 PSDA5PKW4 1024 aaPredicted RBP34.86■■■■□ 3.17
SURF1-203ENST00000463965 CABP4P57796 275 aa34.86■■■■□ 3.17
SURF1-203ENST00000463965 NEFMP07197 916 aa34.85■■■■□ 3.17
SURF1-203ENST00000463965 ITGB4P16144 1822 aa34.84■■■■□ 3.17
SURF1-203ENST00000463965 HMGB2P26583 209 aaKnown RBP34.84■■■■□ 3.17
SURF1-203ENST00000463965 PNNQ9H307 717 aaKnown RBP34.83■■■■□ 3.17
SURF1-203ENST00000463965 STK32BQ9NY57 414 aa34.83■■■■□ 3.17
SURF1-203ENST00000463965 KDM6AO15550 1401 aaPredicted RBP34.82■■■■□ 3.17
SURF1-203ENST00000463965 CCNL1Q9UK58 526 aaPredicted RBP34.82■■■■□ 3.16
SURF1-203ENST00000463965 PALLDQ8WX93 1383 aa34.82■■■■□ 3.16
SURF1-203ENST00000463965 PHACTR3Q96KR7 559 aa34.79■■■■□ 3.16
SURF1-203ENST00000463965 LRRC4BQ9NT99 713 aa34.79■■■■□ 3.16
SURF1-203ENST00000463965 GNAT3A8MTJ3 354 aa34.78■■■■□ 3.16
SURF1-203ENST00000463965 RNMTO43148 476 aaKnown RBP34.77■■■■□ 3.16
SURF1-203ENST00000463965 ANO8Q9HCE9 1232 aaPredicted RBP34.77■■■■□ 3.16
SURF1-203ENST00000463965 ANP32CO43423 234 aa34.76■■■■□ 3.16
SURF1-203ENST00000463965 NFATC2IPQ8NCF5 419 aa34.76■■■■□ 3.16
SURF1-203ENST00000463965 ASAP1Q9ULH1 1129 aa34.76■■■■□ 3.16
SURF1-203ENST00000463965 MAP3K5Q99683 1374 aa34.75■■■■□ 3.15
SURF1-203ENST00000463965 SLC15A2Q16348 729 aa34.75■■■■□ 3.15
SURF1-203ENST00000463965 LGR6Q9HBX8 967 aa34.75■■■■□ 3.15
SURF1-203ENST00000463965 LY75O60449 1722 aa34.75■■■■□ 3.15
SURF1-203ENST00000463965 ATG3Q9NT62 314 aa34.74■■■■□ 3.15
SURF1-203ENST00000463965 KCNQ4P56696 695 aa34.73■■■■□ 3.15
SURF1-203ENST00000463965 WDR43Q15061 677 aaKnown RBP eCLIP34.73■■■■□ 3.15
SURF1-203ENST00000463965 SLC52A2Q9HAB3 445 aa34.72■■■■□ 3.15
SURF1-203ENST00000463965 SCN11AQ9UI33 1791 aa34.7■■■■□ 3.15
SURF1-203ENST00000463965 LOC102724428A0A0B4J2F2 783 aa34.7■■■■□ 3.15
SURF1-203ENST00000463965 SIK1P57059 783 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms