RNA–Protein interactions for RNA: ENST00000463563.6

U2SURP-203, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 2

Gene U2SURP, Length 4,364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-203ENST00000463563 OCSTAMPQ9BR26 566 aa3.55□□□□□ -1.84
U2SURP-203ENST00000463563 CHPF2Q9P2E5 772 aa3.55□□□□□ -1.84
U2SURP-203ENST00000463563 ATP5J2-PTCD1G3V325 749 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 DNAJB2P25686 324 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 FMR1Q06787 632 aaKnown RBP eCLIP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 LONRF3Q496Y0 759 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 CAPN10Q9HC96 672 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 LGR5O75473 907 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 USP46P62068 366 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 FOXD4Q12950 439 aaPredicted RBP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 ENOX2Q16206 610 aaKnown RBP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 RNF187Q5TA31 235 aaPredicted RBP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 PPP1R18Q6NYC8 613 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 FAM43BQ6ZT52 329 aaPredicted RBP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 TMEM87AQ8NBN3 555 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 NLRP2Q9NX02 1062 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 CLSPNQ9HAW4 1339 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 CCDC194A0A1B0GVG4 234 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 ATN1P54259 1190 aaPredicted RBP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 LMOD3Q0VAK6 560 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 STAG1Q8WVM7 1258 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 PMM1Q92871 262 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 MAGEC2Q9UBF1 373 aaPredicted RBP3.54□□□□□ -1.84
U2SURP-203ENST00000463563 WWC3Q9ULE0 1092 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 ZBBXA8MT70 800 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 RNF135Q8IUD6 432 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 RDH13Q8NBN7 331 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 SETDB2Q96T68 719 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 CEP126Q9P2H0 1117 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 PARP2Q9UGN5 583 aa3.54□□□□□ -1.84
U2SURP-203ENST00000463563 NEFMP07197 916 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 BIRC2Q13490 618 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 DSC3Q14574 896 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 CCAR1Q8IX12 1150 aaKnown RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 PLPP7Q8NBV4 271 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 ZDHHC16Q969W1 377 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 PCDHGA4Q9Y5G9 962 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 MRPL42Q9Y6G3 142 aaKnown RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 TREHO43280 583 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 S100BP04271 92 aaPredicted RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 AAMPQ13685 434 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 BMS1Q14692 1282 aaKnown RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 SIX5Q8N196 739 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 U2SURPO15042 1029 aaKnown RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 RACK1P63244 317 aaKnown RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 ZSCAN29Q8IWY8 852 aaPredicted RBP3.53□□□□□ -1.84
U2SURP-203ENST00000463563 FAN1Q9Y2M0 1017 aa3.53□□□□□ -1.84
U2SURP-203ENST00000463563 FKBP4Q02790 459 aaKnown RBP eCLIP3.52□□□□□ -1.85
U2SURP-203ENST00000463563 GAS2L2Q8NHY3 880 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 EVI5LQ96CN4 794 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 UBA5Q9GZZ9 404 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 GALR2O43603 387 aaPredicted RBP3.52□□□□□ -1.85
U2SURP-203ENST00000463563 TMC4Q7Z404 712 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 MCF2L2Q86YR7 1114 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 SMC5Q8IY18 1101 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 ZCRB1Q8TBF4 217 aaKnown RBP3.52□□□□□ -1.85
U2SURP-203ENST00000463563 METTL5Q9NRN9 209 aaKnown RBP3.52□□□□□ -1.85
U2SURP-203ENST00000463563 C6orf229H3BNL8 230 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 ANP32CO43423 234 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 NPR3P17342 541 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 DAB2P98082 770 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 FILIP1Q7Z7B0 1213 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 PIP4P2Q8N4L2 257 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 RBCK1Q9BYM8 510 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 CCSER2Q9H7U1 834 aa3.52□□□□□ -1.85
U2SURP-203ENST00000463563 NOP58Q9Y2X3 529 aaKnown RBP3.52□□□□□ -1.85
U2SURP-203ENST00000463563 CCER2I3L3R5 266 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 PNMA1Q8ND90 353 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 RNF34Q969K3 372 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 EMILIN1Q9Y6C2 1016 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 FMNL1O95466 1100 aaPredicted RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 MCCD1P59942 119 aaPredicted RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 FKBP5Q13451 457 aaPredicted RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 PRPF38AQ8NAV1 312 aaKnown RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 TATDN2Q93075 761 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 DUSP9Q99956 384 aaKnown RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 MKNK1Q9BUB5 465 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 OSBPL2Q9H1P3 480 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 SMAPO00193 183 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 ZNF394Q53GI3 561 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 BRINP2Q9C0B6 783 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 DNAAF2Q9NVR5 837 aaKnown RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.51□□□□□ -1.85
U2SURP-203ENST00000463563 COL4A3BPQ9Y5P4 624 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 SFI1A8K8P3 1242 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 ZNF454Q8N9F8 522 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 PCDH12Q9NPG4 1184 aa3.51□□□□□ -1.85
U2SURP-203ENST00000463563 PPFIA4O75335 1185 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 CTSHP09668 335 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 FGRP09769 529 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 FUT2Q10981 343 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 GNL2Q13823 731 aaKnown RBP3.5□□□□□ -1.85
U2SURP-203ENST00000463563 PLEKHG6Q3KR16 790 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 TSHZ1Q6ZSZ6 1077 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 TCEAL9Q9UHQ7 104 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 FKBPLQ9UIM3 349 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 PRR12Q9ULL5 1215 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 HSD3B2P26439 372 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 WEE1P30291 646 aa3.5□□□□□ -1.85
U2SURP-203ENST00000463563 FMNL3Q8IVF7 1028 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms