RNA–Protein interactions for RNA: ENST00000463426.5

CUL4A-205, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-205ENST00000463426 SULT6B1Q6IMI4 303 aa34.89■■■■□ 3.18
CUL4A-205ENST00000463426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.89■■■■□ 3.18
CUL4A-205ENST00000463426 PDE3BQ13370 1112 aa34.86■■■■□ 3.17
CUL4A-205ENST00000463426 PNNQ9H307 717 aaKnown RBP34.85■■■■□ 3.17
CUL4A-205ENST00000463426 KRT27Q7Z3Y8 459 aa34.84■■■■□ 3.17
CUL4A-205ENST00000463426 U2AF1L5P0DN76 240 aaPredicted RBP34.83■■■■□ 3.17
CUL4A-205ENST00000463426 U2AF1Q01081 240 aaKnown RBP eCLIP34.83■■■■□ 3.175e-9■□□□□ 10.7
CUL4A-205ENST00000463426 AMOTQ4VCS5 1084 aa34.83■■■■□ 3.17
CUL4A-205ENST00000463426 ZCRB1Q8TBF4 217 aaKnown RBP34.83■■■■□ 3.17
CUL4A-205ENST00000463426 SHANK3Q9BYB0 1731 aa34.83■■■■□ 3.17
CUL4A-205ENST00000463426 FCHSD2O94868 740 aa34.82■■■■□ 3.16
CUL4A-205ENST00000463426 SPG7Q9UQ90 795 aa34.82■■■■□ 3.16
CUL4A-205ENST00000463426 WDR43Q15061 677 aaKnown RBP eCLIP34.8■■■■□ 3.16
CUL4A-205ENST00000463426 AEBP1Q8IUX7 1158 aa34.8■■■■□ 3.16
CUL4A-205ENST00000463426 PCDH11XQ9BZA7 1347 aa34.8■■■■□ 3.16
CUL4A-205ENST00000463426 PCDH11YQ9BZA8 1340 aa34.8■■■■□ 3.16
CUL4A-205ENST00000463426 HMOX1P09601 288 aa34.78■■■■□ 3.16
CUL4A-205ENST00000463426 PLEKHO1Q53GL0 409 aaPredicted RBP34.78■■■■□ 3.16
CUL4A-205ENST00000463426 BCL9O00512 1426 aa34.78■■■■□ 3.16
CUL4A-205ENST00000463426 RSPH6AQ9H0K4 717 aa34.76■■■■□ 3.16
CUL4A-205ENST00000463426 MRS2Q9HD23 443 aa34.76■■■■□ 3.16
CUL4A-205ENST00000463426 NEFMP07197 916 aa34.75■■■■□ 3.15
CUL4A-205ENST00000463426 CCER2I3L3R5 266 aa34.74■■■■□ 3.15
CUL4A-205ENST00000463426 FAM196AQ6ZSG2 479 aa34.72■■■■□ 3.15
CUL4A-205ENST00000463426 PRKAR2BP31323 418 aa34.7■■■■□ 3.15
CUL4A-205ENST00000463426 HSP90AB1P08238 724 aaKnown RBP34.68■■■■□ 3.14
CUL4A-205ENST00000463426 SBF2Q86WG5 1849 aa34.68■■■■□ 3.14
CUL4A-205ENST00000463426 IFNL2Q8IZJ0 200 aa34.68■■■■□ 3.14
CUL4A-205ENST00000463426 MARCH10Q8NA82 808 aaPredicted RBP34.68■■■■□ 3.14
CUL4A-205ENST00000463426 GAS2L2Q8NHY3 880 aa34.68■■■■□ 3.14
CUL4A-205ENST00000463426 DDX54Q8TDD1 881 aaKnown RBP34.66■■■■□ 3.14
CUL4A-205ENST00000463426 KAT6BQ8WYB5 2073 aa34.66■■■■□ 3.14
CUL4A-205ENST00000463426 MAPK8IP3Q9UPT6 1336 aa34.64■■■■□ 3.14
CUL4A-205ENST00000463426 C1orf141Q5JVX7 400 aa34.64■■■■□ 3.14
CUL4A-205ENST00000463426 ZNF530Q6P9A1 599 aaPredicted RBP34.64■■■■□ 3.14
CUL4A-205ENST00000463426 PNISRQ8TF01 805 aaKnown RBP34.64■■■■□ 3.14
CUL4A-205ENST00000463426 CYP27B1O15528 508 aa34.63■■■■□ 3.13
CUL4A-205ENST00000463426 NKX1-1Q15270 411 aaPredicted RBP34.63■■■■□ 3.13
CUL4A-205ENST00000463426 PHKG2P15735 406 aa34.62■■■■□ 3.13
CUL4A-205ENST00000463426 CCDC184Q52MB2 194 aa34.62■■■■□ 3.13
CUL4A-205ENST00000463426 AKAP4Q5JQC9 854 aa34.61■■■■□ 3.13
CUL4A-205ENST00000463426 ADAMTS8Q9UP79 889 aa34.61■■■■□ 3.13
CUL4A-205ENST00000463426 NHSQ6T4R5 1651 aa34.6■■■■□ 3.13
CUL4A-205ENST00000463426 PLEKHF1Q96S99 279 aa34.6■■■■□ 3.13
CUL4A-205ENST00000463426 VIRMAQ69YN4 1812 aaKnown RBP34.6■■■■□ 3.13
CUL4A-205ENST00000463426 DOT1LQ8TEK3 1739 aa34.58■■■■□ 3.13
CUL4A-205ENST00000463426 CCDC125Q86Z20 511 aa34.58■■■■□ 3.13
CUL4A-205ENST00000463426 SCN11AQ9UI33 1791 aa34.58■■■■□ 3.13
CUL4A-205ENST00000463426 EP400Q96L91 3159 aa34.57■■■■□ 3.12
CUL4A-205ENST00000463426 MTHFSDQ2M296 383 aaKnown RBP34.57■■■■□ 3.12
CUL4A-205ENST00000463426 RUNDC1Q96C34 613 aa34.57■■■■□ 3.12
CUL4A-205ENST00000463426 DCAF5Q96JK2 942 aa34.56■■■■□ 3.12
CUL4A-205ENST00000463426 ADAMTS7Q9UKP4 1686 aa34.55■■■■□ 3.12
CUL4A-205ENST00000463426 PHACTR3Q96KR7 559 aa34.55■■■■□ 3.12
CUL4A-205ENST00000463426 DLG5Q8TDM6 1919 aa34.55■■■■□ 3.12
CUL4A-205ENST00000463426 MIER1Q8N108 512 aa34.54■■■■□ 3.12
CUL4A-205ENST00000463426 MAP3K5Q99683 1374 aa34.53■■■■□ 3.12
CUL4A-205ENST00000463426 ITGB4P16144 1822 aa34.53■■■■□ 3.12
CUL4A-205ENST00000463426 FAM182BQ5T319 152 aa34.52■■■■□ 3.12
CUL4A-205ENST00000463426 GNAT3A8MTJ3 354 aa34.51■■■■□ 3.12
CUL4A-205ENST00000463426 HTATSF1O43719 755 aaKnown RBP34.51■■■■□ 3.12
CUL4A-205ENST00000463426 TOGARAM1Q9Y4F4 1720 aa34.51■■■■□ 3.12
CUL4A-205ENST00000463426 TNS1Q9HBL0 1735 aaKnown RBP34.5■■■■□ 3.11
CUL4A-205ENST00000463426 NFE2L2Q16236 605 aa34.5■■■■□ 3.11
CUL4A-205ENST00000463426 ERVV-2B6SEH9 535 aa34.49■■■■□ 3.11
CUL4A-205ENST00000463426 BCL11BQ9C0K0 894 aaPredicted RBP34.49■■■■□ 3.11
CUL4A-205ENST00000463426 LMOD3Q0VAK6 560 aa34.46■■■■□ 3.11
CUL4A-205ENST00000463426 SF3B2Q13435 895 aaKnown RBP34.46■■■■□ 3.11
CUL4A-205ENST00000463426 RGPD3A6NKT7 1758 aaPredicted RBP34.46■■■■□ 3.11
CUL4A-205ENST00000463426 RGPD4Q7Z3J3 1758 aa34.46■■■■□ 3.11
CUL4A-205ENST00000463426 KDM6AO15550 1401 aaPredicted RBP34.46■■■■□ 3.11
CUL4A-205ENST00000463426 RTF1Q92541 710 aaKnown RBP34.45■■■■□ 3.11
CUL4A-205ENST00000463426 BTAF1O14981 1849 aa34.45■■■■□ 3.11
CUL4A-205ENST00000463426 MRC1P22897 1456 aa34.44■■■■□ 3.1
CUL4A-205ENST00000463426 CCDC146Q8IYE0 955 aa34.43■■■■□ 3.1
CUL4A-205ENST00000463426 TRIM37O94972 964 aa34.42■■■■□ 3.1
CUL4A-205ENST00000463426 NCBP3Q53F19 620 aaKnown RBP34.42■■■■□ 3.1
CUL4A-205ENST00000463426 TMPOP42166 694 aaKnown RBP34.41■■■■□ 3.1
CUL4A-205ENST00000463426 MPRIPQ6WCQ1 1025 aa34.41■■■■□ 3.1
CUL4A-205ENST00000463426 FAM9BQ8IZU0 186 aa34.41■■■■□ 3.1
CUL4A-205ENST00000463426 RNMTO43148 476 aaKnown RBP34.4■■■■□ 3.1
CUL4A-205ENST00000463426 PRIM1P49642 420 aaKnown RBP34.4■■■■□ 3.1
CUL4A-205ENST00000463426 UPF1Q92900 1129 aaKnown RBP eCLIP34.4■■■■□ 3.1
CUL4A-205ENST00000463426 ACSBG1Q96GR2 724 aa34.4■■■■□ 3.1
CUL4A-205ENST00000463426 CEMIPQ8WUJ3 1361 aa34.39■■■■□ 3.1
CUL4A-205ENST00000463426 NGEFQ8N5V2 710 aa34.39■■■■□ 3.1
CUL4A-205ENST00000463426 TMOD3Q9NYL9 352 aa34.39■■■■□ 3.1
CUL4A-205ENST00000463426 SYTL4Q96C24 671 aaPredicted RBP34.38■■■■□ 3.09
CUL4A-205ENST00000463426 SIPA1L3O60292 1781 aaPredicted RBP34.38■■■■□ 3.09
CUL4A-205ENST00000463426 CABP4P57796 275 aa34.37■■■■□ 3.09
CUL4A-205ENST00000463426 RIPK4P57078 832 aa34.36■■■■□ 3.09
CUL4A-205ENST00000463426 BAG6P46379 1132 aa34.35■■■■□ 3.09
CUL4A-205ENST00000463426 KCNQ2O43526 872 aa34.34■■■■□ 3.09
CUL4A-205ENST00000463426 TEFQ10587 303 aa34.34■■■■□ 3.09
CUL4A-205ENST00000463426 SLC52A2Q9HAB3 445 aa34.34■■■■□ 3.09
CUL4A-205ENST00000463426 APAF1O14727 1248 aa34.33■■■■□ 3.09
CUL4A-205ENST00000463426 PLSCR1O15162 318 aa34.32■■■■□ 3.08
CUL4A-205ENST00000463426 HMGB2P26583 209 aaKnown RBP34.32■■■■□ 3.08
CUL4A-205ENST00000463426 IL17REQ8NFR9 667 aa34.32■■■■□ 3.08
CUL4A-205ENST00000463426 SMARCC1Q92922 1105 aaPredicted RBP34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms