RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PLEKHG2Q9H7P9 1386 aa19.87■□□□□ 0.77
C9orf3-211ENST00000463372 ARHGAP27Q6ZUM4 889 aa19.87■□□□□ 0.77
C9orf3-211ENST00000463372 PRDM10Q9NQV6 1147 aa19.87■□□□□ 0.77
C9orf3-211ENST00000463372 C10orf71Q711Q0 1435 aa19.86■□□□□ 0.77
C9orf3-211ENST00000463372 PKD1L3Q7Z443 1732 aa19.85■□□□□ 0.77
C9orf3-211ENST00000463372 KCNH5Q8NCM2 988 aa19.85■□□□□ 0.77
C9orf3-211ENST00000463372 RRAGCQ9HB90 399 aa19.85■□□□□ 0.77
C9orf3-211ENST00000463372 NLRP2Q9NX02 1062 aa19.84■□□□□ 0.77
C9orf3-211ENST00000463372 BCS1LQ9Y276 419 aa19.84■□□□□ 0.77
C9orf3-211ENST00000463372 KCPQ6ZWJ8 1503 aa19.84■□□□□ 0.77
C9orf3-211ENST00000463372 C5P01031 1676 aa19.84■□□□□ 0.77
C9orf3-211ENST00000463372 SOX12O15370 315 aa19.83■□□□□ 0.77
C9orf3-211ENST00000463372 DOT1LQ8TEK3 1739 aa19.82■□□□□ 0.76
C9orf3-211ENST00000463372 USP54Q70EL1 1684 aa19.82■□□□□ 0.76
C9orf3-211ENST00000463372 C9orf131Q5VYM1 1079 aa19.82■□□□□ 0.76
C9orf3-211ENST00000463372 N4BP2Q86UW6 1770 aaPredicted RBP19.82■□□□□ 0.76
C9orf3-211ENST00000463372 FOXN1O15353 648 aa19.81■□□□□ 0.76
C9orf3-211ENST00000463372 HMGB2P26583 209 aaKnown RBP19.81■□□□□ 0.76
C9orf3-211ENST00000463372 PRIM1P49642 420 aaKnown RBP19.81■□□□□ 0.76
C9orf3-211ENST00000463372 DDX54Q8TDD1 881 aaKnown RBP19.81■□□□□ 0.76
C9orf3-211ENST00000463372 ABHD8Q96I13 439 aa19.81■□□□□ 0.76
C9orf3-211ENST00000463372 ANKRD36BQ8N2N9 1353 aa19.79■□□□□ 0.76
C9orf3-211ENST00000463372 PXDNLA1KZ92 1463 aa19.79■□□□□ 0.76
C9orf3-211ENST00000463372 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
C9orf3-211ENST00000463372 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
C9orf3-211ENST00000463372 PDE4DIPQ5VU43 2346 aa19.78■□□□□ 0.76
C9orf3-211ENST00000463372 CTCFP49711 727 aaPredicted RBP19.77■□□□□ 0.76
C9orf3-211ENST00000463372 AIDAQ96BJ3 306 aa19.77■□□□□ 0.76
C9orf3-211ENST00000463372 USP47Q96K76 1375 aa19.77■□□□□ 0.76
C9orf3-211ENST00000463372 KIF13BQ9NQT8 1826 aa19.76■□□□□ 0.75
C9orf3-211ENST00000463372 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
C9orf3-211ENST00000463372 MPHOSPH9Q99550 1183 aa19.76■□□□□ 0.75
C9orf3-211ENST00000463372 RGS19P49795 217 aa19.74■□□□□ 0.75
C9orf3-211ENST00000463372 ARFGEF1Q9Y6D6 1849 aa19.74■□□□□ 0.75
C9orf3-211ENST00000463372 ERBB3P21860 1342 aa19.74■□□□□ 0.75
C9orf3-211ENST00000463372 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
C9orf3-211ENST00000463372 NSD2O96028 1365 aa19.73■□□□□ 0.75
C9orf3-211ENST00000463372 FCHSD2O94868 740 aa19.73■□□□□ 0.75
C9orf3-211ENST00000463372 TGFB2P61812 414 aa19.72■□□□□ 0.75
C9orf3-211ENST00000463372 MKRN1Q9UHC7 482 aaKnown RBP19.72■□□□□ 0.75
C9orf3-211ENST00000463372 BRCA1P38398 1863 aaKnown RBP19.71■□□□□ 0.75
C9orf3-211ENST00000463372 UBR3Q6ZT12 1888 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 A0A0G2JLW4 131 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 CCDC85CA6NKD9 419 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 RNF181Q9P0P0 153 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 KDM2AQ9Y2K7 1162 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 SBF1O95248 1867 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 NFAT5O94916 1531 aa19.71■□□□□ 0.75
C9orf3-211ENST00000463372 PHF14O94880 888 aa19.7■□□□□ 0.74
C9orf3-211ENST00000463372 AK7Q96M32 723 aa19.7■□□□□ 0.74
C9orf3-211ENST00000463372 C4BP0C0L5 1744 aa19.69■□□□□ 0.74
C9orf3-211ENST00000463372 CABP1Q9NZU7 370 aa19.69■□□□□ 0.74
C9orf3-211ENST00000463372 LBX1P52954 281 aa19.68■□□□□ 0.74
C9orf3-211ENST00000463372 CABP2Q9NPB3 220 aa19.68■□□□□ 0.74
C9orf3-211ENST00000463372 NSD3Q9BZ95 1437 aa19.68■□□□□ 0.74
C9orf3-211ENST00000463372 LTN1O94822 1766 aa19.67■□□□□ 0.74
C9orf3-211ENST00000463372 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
C9orf3-211ENST00000463372 TOGARAM1Q9Y4F4 1720 aa19.67■□□□□ 0.74
C9orf3-211ENST00000463372 SMIM5Q71RC9 77 aa19.66■□□□□ 0.74
C9orf3-211ENST00000463372 CREBZFQ9NS37 354 aa19.66■□□□□ 0.74
C9orf3-211ENST00000463372 TNRC18O15417 2968 aaPredicted RBP19.65■□□□□ 0.74
C9orf3-211ENST00000463372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.65■□□□□ 0.74
C9orf3-211ENST00000463372 ANKRD24Q8TF21 1146 aa19.65■□□□□ 0.74
C9orf3-211ENST00000463372 DCAF11Q8TEB1 546 aa19.64■□□□□ 0.73
C9orf3-211ENST00000463372 TTC21BQ7Z4L5 1316 aa19.63■□□□□ 0.73
C9orf3-211ENST00000463372 MMP10P09238 476 aa19.63■□□□□ 0.73
C9orf3-211ENST00000463372 DPEP1P16444 411 aa19.63■□□□□ 0.73
C9orf3-211ENST00000463372 AMIGO3Q86WK7 504 aa19.62■□□□□ 0.73
C9orf3-211ENST00000463372 TTC21AQ8NDW8 1320 aa19.6■□□□□ 0.73
C9orf3-211ENST00000463372 SSFA2P28290 1259 aa19.6■□□□□ 0.73
C9orf3-211ENST00000463372 CNTNAP1P78357 1384 aa19.59■□□□□ 0.73
C9orf3-211ENST00000463372 PALLDQ8WX93 1383 aa19.59■□□□□ 0.73
C9orf3-211ENST00000463372 ZC3H4Q9UPT8 1303 aaKnown RBP19.59■□□□□ 0.73
C9orf3-211ENST00000463372 PPARGC1BQ86YN6 1023 aaKnown RBP19.59■□□□□ 0.73
C9orf3-211ENST00000463372 FAM208AQ9UK61 1670 aaKnown RBP19.59■□□□□ 0.73
C9orf3-211ENST00000463372 VIRMAQ69YN4 1812 aaKnown RBP19.58■□□□□ 0.73
C9orf3-211ENST00000463372 STAC3Q96MF2 364 aa19.58■□□□□ 0.72
C9orf3-211ENST00000463372 CFAP44Q96MT7 982 aa19.58■□□□□ 0.72
C9orf3-211ENST00000463372 ZNF692Q9BU19 519 aaPredicted RBP19.58■□□□□ 0.72
C9orf3-211ENST00000463372 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
C9orf3-211ENST00000463372 CCDC87Q9NVE4 849 aa19.57■□□□□ 0.72
C9orf3-211ENST00000463372 WBP1LQ9NX94 342 aa19.57■□□□□ 0.72
C9orf3-211ENST00000463372 PIM2Q9P1W9 311 aa19.57■□□□□ 0.72
C9orf3-211ENST00000463372 GLTPD2A6NH11 291 aa19.56■□□□□ 0.72
C9orf3-211ENST00000463372 DCAF5Q96JK2 942 aa19.56■□□□□ 0.72
C9orf3-211ENST00000463372 HSPA8P11142 646 aaKnown RBP19.55■□□□□ 0.72
C9orf3-211ENST00000463372 DALRD3Q5D0E6 543 aaKnown RBP19.55■□□□□ 0.72
C9orf3-211ENST00000463372 CCDC88AQ3V6T2 1871 aa19.54■□□□□ 0.72
C9orf3-211ENST00000463372 VEGFBP49765 207 aa19.53■□□□□ 0.72
C9orf3-211ENST00000463372 KCNA3P22001 575 aa19.51■□□□□ 0.71
C9orf3-211ENST00000463372 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
C9orf3-211ENST00000463372 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
C9orf3-211ENST00000463372 CENPJQ9HC77 1338 aaPredicted RBP19.51■□□□□ 0.71
C9orf3-211ENST00000463372 NLGN1Q8N2Q7 840 aa19.5■□□□□ 0.71
C9orf3-211ENST00000463372 LTV1Q96GA3 475 aaPredicted RBP19.5■□□□□ 0.71
C9orf3-211ENST00000463372 TIAM2Q8IVF5 1701 aa19.49■□□□□ 0.71
C9orf3-211ENST00000463372 GNPATO15228 680 aa19.49■□□□□ 0.71
C9orf3-211ENST00000463372 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
C9orf3-211ENST00000463372 MPRIPQ6WCQ1 1025 aa19.49■□□□□ 0.71
C9orf3-211ENST00000463372 ITGB4P16144 1822 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms