RNA–Protein interactions for RNA: ENST00000463032.5

LYRM4-204, Transcript of LYR motif containing 4, humanhuman

TSL 1 (best)

Gene LYRM4, Length 1,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-204ENST00000463032 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
LYRM4-204ENST00000463032 RGPD1P0DJD0 1748 aa17.92■□□□□ 0.46
LYRM4-204ENST00000463032 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
LYRM4-204ENST00000463032 FCHSD2O94868 740 aa17.91■□□□□ 0.46
LYRM4-204ENST00000463032 KRT27Q7Z3Y8 459 aa17.91■□□□□ 0.46
LYRM4-204ENST00000463032 THSD7AQ9UPZ6 1657 aa17.9■□□□□ 0.46
LYRM4-204ENST00000463032 PLEKHO1Q53GL0 409 aaPredicted RBP17.9■□□□□ 0.46
LYRM4-204ENST00000463032 FAM182BQ5T319 152 aa17.9■□□□□ 0.46
LYRM4-204ENST00000463032 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
LYRM4-204ENST00000463032 ADAMTS8Q9UP79 889 aa17.9■□□□□ 0.46
LYRM4-204ENST00000463032 SPG7Q9UQ90 795 aa17.9■□□□□ 0.46
LYRM4-204ENST00000463032 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
LYRM4-204ENST00000463032 TNS2Q63HR2 1409 aa17.88■□□□□ 0.45
LYRM4-204ENST00000463032 NEFMP07197 916 aa17.88■□□□□ 0.45
LYRM4-204ENST00000463032 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
LYRM4-204ENST00000463032 ILDR2Q71H61 639 aa17.88■□□□□ 0.45
LYRM4-204ENST00000463032 MARCH10Q8NA82 808 aaPredicted RBP17.88■□□□□ 0.45
LYRM4-204ENST00000463032 PNISRQ8TF01 805 aaKnown RBP17.88■□□□□ 0.45
LYRM4-204ENST00000463032 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
LYRM4-204ENST00000463032 WNK3Q9BYP7 1800 aa17.87■□□□□ 0.45
LYRM4-204ENST00000463032 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
LYRM4-204ENST00000463032 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
LYRM4-204ENST00000463032 FAM9BQ8IZU0 186 aa17.87■□□□□ 0.45
LYRM4-204ENST00000463032 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
LYRM4-204ENST00000463032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
LYRM4-204ENST00000463032 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
LYRM4-204ENST00000463032 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
LYRM4-204ENST00000463032 LRRC37A3O60309 1634 aa17.86■□□□□ 0.45
LYRM4-204ENST00000463032 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
LYRM4-204ENST00000463032 MAPK8IP3Q9UPT6 1336 aa17.85■□□□□ 0.45
LYRM4-204ENST00000463032 MTHFSDQ2M296 383 aaKnown RBP17.85■□□□□ 0.45
LYRM4-204ENST00000463032 CYP27B1O15528 508 aa17.84■□□□□ 0.45
LYRM4-204ENST00000463032 C1orf141Q5JVX7 400 aa17.84■□□□□ 0.45
LYRM4-204ENST00000463032 IFNL2Q8IZJ0 200 aa17.83■□□□□ 0.45
LYRM4-204ENST00000463032 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.45
LYRM4-204ENST00000463032 PLEKHG2Q9H7P9 1386 aa17.83■□□□□ 0.44
LYRM4-204ENST00000463032 PHKG2P15735 406 aa17.82■□□□□ 0.44
LYRM4-204ENST00000463032 GAS2L2Q8NHY3 880 aa17.82■□□□□ 0.44
LYRM4-204ENST00000463032 BRWD3Q6RI45 1802 aa17.82■□□□□ 0.44
LYRM4-204ENST00000463032 RUNDC1Q96C34 613 aa17.82■□□□□ 0.44
LYRM4-204ENST00000463032 FAM196AQ6ZSG2 479 aa17.81■□□□□ 0.44
LYRM4-204ENST00000463032 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
LYRM4-204ENST00000463032 ACSBG1Q96GR2 724 aa17.8■□□□□ 0.44
LYRM4-204ENST00000463032 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
LYRM4-204ENST00000463032 PKD1L3Q7Z443 1732 aa17.79■□□□□ 0.44
LYRM4-204ENST00000463032 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
LYRM4-204ENST00000463032 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
LYRM4-204ENST00000463032 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
LYRM4-204ENST00000463032 RRP7AQ9Y3A4 280 aaKnown RBP17.78■□□□□ 0.44
LYRM4-204ENST00000463032 HSP90AB1P08238 724 aaKnown RBP17.77■□□□□ 0.44
LYRM4-204ENST00000463032 NFE2L2Q16236 605 aa17.77■□□□□ 0.44
LYRM4-204ENST00000463032 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
LYRM4-204ENST00000463032 DCAF5Q96JK2 942 aa17.76■□□□□ 0.43
LYRM4-204ENST00000463032 SHANK3Q9BYB0 1731 aa17.76■□□□□ 0.43
LYRM4-204ENST00000463032 APAF1O14727 1248 aa17.75■□□□□ 0.43
LYRM4-204ENST00000463032 TRIM37O94972 964 aa17.75■□□□□ 0.43
LYRM4-204ENST00000463032 RIPK4P57078 832 aa17.75■□□□□ 0.43
LYRM4-204ENST00000463032 NKX1-1Q15270 411 aaPredicted RBP17.75■□□□□ 0.43
LYRM4-204ENST00000463032 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
LYRM4-204ENST00000463032 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
LYRM4-204ENST00000463032 KCNQ2O43526 872 aa17.75■□□□□ 0.43
LYRM4-204ENST00000463032 TMPOP42166 694 aaKnown RBP17.75■□□□□ 0.43
LYRM4-204ENST00000463032 PRIM1P49642 420 aaKnown RBP17.75■□□□□ 0.43
LYRM4-204ENST00000463032 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
LYRM4-204ENST00000463032 RNMTO43148 476 aaKnown RBP17.73■□□□□ 0.43
LYRM4-204ENST00000463032 MCM10Q7L590 875 aa17.73■□□□□ 0.43
LYRM4-204ENST00000463032 DCTN1Q14203 1278 aa17.72■□□□□ 0.43
LYRM4-204ENST00000463032 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
LYRM4-204ENST00000463032 BCL9O00512 1426 aa17.72■□□□□ 0.43
LYRM4-204ENST00000463032 KDM6AO15550 1401 aaPredicted RBP17.72■□□□□ 0.43
LYRM4-204ENST00000463032 EP400Q96L91 3159 aa17.71■□□□□ 0.43
LYRM4-204ENST00000463032 CABP4P57796 275 aa17.71■□□□□ 0.43
LYRM4-204ENST00000463032 IL17REQ8NFR9 667 aa17.71■□□□□ 0.43
LYRM4-204ENST00000463032 SALL2Q9Y467 1007 aaPredicted RBP17.71■□□□□ 0.43
LYRM4-204ENST00000463032 ERVV-2B6SEH9 535 aa17.7■□□□□ 0.42
LYRM4-204ENST00000463032 SF3B2Q13435 895 aaKnown RBP17.7■□□□□ 0.42
LYRM4-204ENST00000463032 BCL11BQ9C0K0 894 aaPredicted RBP17.7■□□□□ 0.42
LYRM4-204ENST00000463032 TMOD3Q9NYL9 352 aa17.7■□□□□ 0.42
LYRM4-204ENST00000463032 HTATSF1O43719 755 aaKnown RBP17.69■□□□□ 0.42
LYRM4-204ENST00000463032 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
LYRM4-204ENST00000463032 TEFQ10587 303 aa17.69■□□□□ 0.42
LYRM4-204ENST00000463032 NFATC2IPQ8NCF5 419 aa17.69■□□□□ 0.42
LYRM4-204ENST00000463032 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
LYRM4-204ENST00000463032 APBA3O96018 575 aa17.68■□□□□ 0.42
LYRM4-204ENST00000463032 PIGBQ92521 554 aa17.68■□□□□ 0.42
LYRM4-204ENST00000463032 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
LYRM4-204ENST00000463032 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
LYRM4-204ENST00000463032 UPF1Q92900 1129 aaKnown RBP eCLIP17.67■□□□□ 0.42
LYRM4-204ENST00000463032 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
LYRM4-204ENST00000463032 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
LYRM4-204ENST00000463032 CCDC125Q86Z20 511 aa17.65■□□□□ 0.42
LYRM4-204ENST00000463032 TOGARAM1Q9Y4F4 1720 aa17.65■□□□□ 0.42
LYRM4-204ENST00000463032 CEMIPQ8WUJ3 1361 aa17.64■□□□□ 0.41
LYRM4-204ENST00000463032 NHSQ6T4R5 1651 aa17.63■□□□□ 0.41
LYRM4-204ENST00000463032 BAG6P46379 1132 aa17.63■□□□□ 0.41
LYRM4-204ENST00000463032 ASAP1Q9ULH1 1129 aa17.63■□□□□ 0.41
LYRM4-204ENST00000463032 BTBD11A6QL63 1104 aa17.62■□□□□ 0.41
LYRM4-204ENST00000463032 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
LYRM4-204ENST00000463032 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
LYRM4-204ENST00000463032 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms