RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 NPHP3Q7Z494 1330 aa10.88□□□□□ -0.67
RPA3-205ENST00000462723 CDK12Q9NYV4 1490 aaPredicted RBP10.88□□□□□ -0.67
RPA3-205ENST00000462723 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
RPA3-205ENST00000462723 PPM1GO15355 546 aaPredicted RBP10.88□□□□□ -0.67
RPA3-205ENST00000462723 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
RPA3-205ENST00000462723 TRPM3Q9HCF6 1732 aaPredicted RBP10.88□□□□□ -0.67
RPA3-205ENST00000462723 NUDCQ9Y266 331 aa10.88□□□□□ -0.67
RPA3-205ENST00000462723 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
RPA3-205ENST00000462723 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
RPA3-205ENST00000462723 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
RPA3-205ENST00000462723 MARF1Q9Y4F3 1742 aaKnown RBP10.87□□□□□ -0.67
RPA3-205ENST00000462723 DIAPH1O60610 1272 aaKnown RBP10.87□□□□□ -0.67
RPA3-205ENST00000462723 XPCQ01831 940 aaPredicted RBP10.87□□□□□ -0.67
RPA3-205ENST00000462723 RIMBP2O15034 1052 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 FBLN1P23142 703 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 PTGER2P43116 358 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 NUTM2GQ5VZR2 741 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 BRINP3Q76B58 766 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 EMILIN1Q9Y6C2 1016 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 SBNO1A3KN83 1393 aa10.86□□□□□ -0.67
RPA3-205ENST00000462723 SOX12O15370 315 aa10.85□□□□□ -0.67
RPA3-205ENST00000462723 RRS1Q15050 365 aaKnown RBP10.85□□□□□ -0.67
RPA3-205ENST00000462723 LMOD2Q6P5Q4 547 aa10.85□□□□□ -0.67
RPA3-205ENST00000462723 KCNH5Q8NCM2 988 aa10.85□□□□□ -0.67
RPA3-205ENST00000462723 ALS2Q96Q42 1657 aa10.85□□□□□ -0.67
RPA3-205ENST00000462723 U2SURPO15042 1029 aaKnown RBP10.84□□□□□ -0.67
RPA3-205ENST00000462723 U2AF1L5P0DN76 240 aaPredicted RBP10.84□□□□□ -0.67
RPA3-205ENST00000462723 U2AF1Q01081 240 aaKnown RBP eCLIP10.84□□□□□ -0.67
RPA3-205ENST00000462723 KIF24Q5T7B8 1368 aa10.84□□□□□ -0.67
RPA3-205ENST00000462723 PXDNQ92626 1479 aa10.84□□□□□ -0.67
RPA3-205ENST00000462723 FLT4P35916 1363 aa10.83□□□□□ -0.68
RPA3-205ENST00000462723 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
RPA3-205ENST00000462723 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
RPA3-205ENST00000462723 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
RPA3-205ENST00000462723 TNS3Q68CZ2 1445 aa10.83□□□□□ -0.68
RPA3-205ENST00000462723 MAP3K19Q56UN5 1328 aa10.83□□□□□ -0.68
RPA3-205ENST00000462723 ARHGEF10O15013 1369 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 PEAK1Q9H792 1746 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 AMPHP49418 695 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
RPA3-205ENST00000462723 CCDC146Q8IYE0 955 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 DDX17Q92841 729 aaKnown RBP10.82□□□□□ -0.68
RPA3-205ENST00000462723 RUNDC1Q96C34 613 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 SLIT3O75094 1523 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 LTN1O94822 1766 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 USP19O94966 1318 aa10.82□□□□□ -0.68
RPA3-205ENST00000462723 RTL1A6NKG5 1358 aa10.81□□□□□ -0.68
RPA3-205ENST00000462723 NHSL1Q5SYE7 1610 aa10.81□□□□□ -0.68
RPA3-205ENST00000462723 NFAT5O94916 1531 aa10.81□□□□□ -0.68
RPA3-205ENST00000462723 IL13P35225 146 aa10.81□□□□□ -0.68
RPA3-205ENST00000462723 NGEFQ8N5V2 710 aa10.81□□□□□ -0.68
RPA3-205ENST00000462723 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
RPA3-205ENST00000462723 SPATA31A3Q5VYP0 1347 aa10.81□□□□□ -0.68
RPA3-205ENST00000462723 GCP02774 474 aa10.8□□□□□ -0.68
RPA3-205ENST00000462723 PHRF1Q9P1Y6 1649 aaKnown RBP10.8□□□□□ -0.68
RPA3-205ENST00000462723 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 SENP3-EIF4A1A0A087X0R7 540 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 APAF1O14727 1248 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 FCHSD2O94868 740 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 NEFMP07197 916 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 PDE3BQ13370 1112 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 EIF4A2Q14240 407 aaKnown RBP10.79□□□□□ -0.68
RPA3-205ENST00000462723 HSP90AB2PQ58FF8 381 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
RPA3-205ENST00000462723 MAPK8IP3Q9UPT6 1336 aa10.79□□□□□ -0.68
RPA3-205ENST00000462723 MED1Q15648 1581 aaPredicted RBP10.78□□□□□ -0.68
RPA3-205ENST00000462723 HOXC9P31274 260 aa10.78□□□□□ -0.68
RPA3-205ENST00000462723 IQSEC2Q5JU85 1478 aa10.77□□□□□ -0.69
RPA3-205ENST00000462723 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
RPA3-205ENST00000462723 TOM1O60784 492 aa10.77□□□□□ -0.69
RPA3-205ENST00000462723 ARHGEF25Q86VW2 580 aa10.77□□□□□ -0.69
RPA3-205ENST00000462723 TCP11L2Q8N4U5 519 aa10.77□□□□□ -0.69
RPA3-205ENST00000462723 IP6K1Q92551 441 aa10.77□□□□□ -0.69
RPA3-205ENST00000462723 AHDC1Q5TGY3 1603 aaPredicted RBP10.76□□□□□ -0.69
RPA3-205ENST00000462723 RGPD1P0DJD0 1748 aa10.76□□□□□ -0.69
RPA3-205ENST00000462723 CRYBG1Q9Y4K1 1723 aa10.76□□□□□ -0.69
RPA3-205ENST00000462723 PRKAR2BP31323 418 aa10.76□□□□□ -0.69
RPA3-205ENST00000462723 RSPH6AQ9H0K4 717 aa10.76□□□□□ -0.69
RPA3-205ENST00000462723 HMOX1P09601 288 aa10.75□□□□□ -0.69
RPA3-205ENST00000462723 GPR153Q6NV75 609 aa10.75□□□□□ -0.69
RPA3-205ENST00000462723 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
RPA3-205ENST00000462723 PLEKHF1Q96S99 279 aa10.75□□□□□ -0.69
RPA3-205ENST00000462723 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
RPA3-205ENST00000462723 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
RPA3-205ENST00000462723 SULT6B1Q6IMI4 303 aa10.74□□□□□ -0.69
RPA3-205ENST00000462723 LRRC59Q96AG4 307 aaKnown RBP10.74□□□□□ -0.69
RPA3-205ENST00000462723 ABCC6O95255 1503 aa10.74□□□□□ -0.69
RPA3-205ENST00000462723 UBAP1LF5GYI3 381 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 CCDC27Q2M243 656 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 CABLES1Q8TDN4 633 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 LTV1Q96GA3 475 aaPredicted RBP10.73□□□□□ -0.69
RPA3-205ENST00000462723 RRP7AQ9Y3A4 280 aaKnown RBP10.73□□□□□ -0.69
RPA3-205ENST00000462723 IGSF1Q8N6C5 1336 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 ZNF521Q96K83 1311 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 CPDO75976 1380 aa10.73□□□□□ -0.69
RPA3-205ENST00000462723 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
RPA3-205ENST00000462723 ABCA3Q99758 1704 aa10.72□□□□□ -0.69
RPA3-205ENST00000462723 TMPOP42166 694 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms