RNA–Protein interactions for RNA: ENST00000462625.1

LIMK2-206, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 1,042 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-206ENST00000462625 RGPD4Q7Z3J3 1758 aa31.5■■■□□ 2.63
LIMK2-206ENST00000462625 NPC1L1Q9UHC9 1359 aa31.49■■■□□ 2.63
LIMK2-206ENST00000462625 EIF4A2Q14240 407 aaKnown RBP31.49■■■□□ 2.63
LIMK2-206ENST00000462625 EYA1Q99502 592 aa31.49■■■□□ 2.63
LIMK2-206ENST00000462625 SHANK3Q9BYB0 1731 aa31.49■■■□□ 2.63
LIMK2-206ENST00000462625 PLSCR1O15162 318 aa31.48■■■□□ 2.63
LIMK2-206ENST00000462625 ACSBG1Q96GR2 724 aa31.47■■■□□ 2.63
LIMK2-206ENST00000462625 RREB1Q92766 1687 aa31.47■■■□□ 2.63
LIMK2-206ENST00000462625 NCAPD2Q15021 1401 aa31.46■■■□□ 2.63
LIMK2-206ENST00000462625 PTF1AQ7RTS3 328 aa31.44■■■□□ 2.62
LIMK2-206ENST00000462625 KCNQ2O43526 872 aa31.43■■■□□ 2.62
LIMK2-206ENST00000462625 PCDH11XQ9BZA7 1347 aa31.43■■■□□ 2.62
LIMK2-206ENST00000462625 PCDH11YQ9BZA8 1340 aa31.43■■■□□ 2.62
LIMK2-206ENST00000462625 CNGB1Q14028 1251 aaPredicted RBP31.41■■■□□ 2.62
LIMK2-206ENST00000462625 SPG7Q9UQ90 795 aa31.41■■■□□ 2.62
LIMK2-206ENST00000462625 NUP188Q5SRE5 1749 aa31.41■■■□□ 2.62
LIMK2-206ENST00000462625 PKD1L3Q7Z443 1732 aa31.41■■■□□ 2.62
LIMK2-206ENST00000462625 BTAF1O14981 1849 aa31.4■■■□□ 2.62
LIMK2-206ENST00000462625 NBPF14Q5TI25 921 aa31.4■■■□□ 2.62
LIMK2-206ENST00000462625 ZEB1P37275 1124 aaPredicted RBP31.39■■■□□ 2.62
LIMK2-206ENST00000462625 MTHFSP49914 203 aa31.39■■■□□ 2.62
LIMK2-206ENST00000462625 DOT1LQ8TEK3 1739 aa31.38■■■□□ 2.61
LIMK2-206ENST00000462625 IGSF1Q8N6C5 1336 aa31.38■■■□□ 2.61
LIMK2-206ENST00000462625 SYTL4Q96C24 671 aaPredicted RBP31.36■■■□□ 2.61
LIMK2-206ENST00000462625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.36■■■□□ 2.61
LIMK2-206ENST00000462625 PLEKHG2Q9H7P9 1386 aa31.35■■■□□ 2.61
LIMK2-206ENST00000462625 PSDA5PKW4 1024 aaPredicted RBP31.33■■■□□ 2.61
LIMK2-206ENST00000462625 PRIM1P49642 420 aaKnown RBP31.33■■■□□ 2.61
LIMK2-206ENST00000462625 R3HDM1Q15032 1099 aaKnown RBP31.32■■■□□ 2.6
LIMK2-206ENST00000462625 IL13P35225 146 aa31.31■■■□□ 2.6
LIMK2-206ENST00000462625 TXNRD1Q16881 649 aa31.31■■■□□ 2.6
LIMK2-206ENST00000462625 CYP27B1O15528 508 aa31.3■■■□□ 2.6
LIMK2-206ENST00000462625 DIAPH1O60610 1272 aaKnown RBP31.27■■■□□ 2.6
LIMK2-206ENST00000462625 PLEKHO1Q53GL0 409 aaPredicted RBP31.27■■■□□ 2.6
LIMK2-206ENST00000462625 IFNL2Q8IZJ0 200 aa31.27■■■□□ 2.6
LIMK2-206ENST00000462625 PROM2Q8N271 834 aa31.27■■■□□ 2.6
LIMK2-206ENST00000462625 AMOTQ4VCS5 1084 aa31.26■■■□□ 2.59
LIMK2-206ENST00000462625 SULT6B1Q6IMI4 303 aa31.26■■■□□ 2.59
LIMK2-206ENST00000462625 ITGB4P16144 1822 aa31.25■■■□□ 2.59
LIMK2-206ENST00000462625 NKX1-1Q15270 411 aaPredicted RBP31.24■■■□□ 2.59
LIMK2-206ENST00000462625 CFAP53Q96M91 514 aa31.23■■■□□ 2.59
LIMK2-206ENST00000462625 KDRP35968 1356 aa31.22■■■□□ 2.59
LIMK2-206ENST00000462625 PHKG2P15735 406 aa31.22■■■□□ 2.59
LIMK2-206ENST00000462625 AEBP1Q8IUX7 1158 aa31.22■■■□□ 2.59
LIMK2-206ENST00000462625 MPRIPQ6WCQ1 1025 aa31.2■■■□□ 2.59
LIMK2-206ENST00000462625 STK32BQ9NY57 414 aa31.2■■■□□ 2.59
LIMK2-206ENST00000462625 TOGARAM1Q9Y4F4 1720 aa31.19■■■□□ 2.58
LIMK2-206ENST00000462625 HSP90AB1P08238 724 aaKnown RBP31.19■■■□□ 2.58
LIMK2-206ENST00000462625 SLC27A3Q5K4L6 730 aa31.19■■■□□ 2.58
LIMK2-206ENST00000462625 LY75O60449 1722 aa31.18■■■□□ 2.58
LIMK2-206ENST00000462625 ZNF530Q6P9A1 599 aaPredicted RBP31.17■■■□□ 2.58
LIMK2-206ENST00000462625 PPP2R1AP30153 589 aa31.16■■■□□ 2.58
LIMK2-206ENST00000462625 C1orf141Q5JVX7 400 aa31.16■■■□□ 2.58
LIMK2-206ENST00000462625 HMOX1P09601 288 aa31.15■■■□□ 2.58
LIMK2-206ENST00000462625 ANO8Q9HCE9 1232 aaPredicted RBP31.15■■■□□ 2.58
LIMK2-206ENST00000462625 COL3A1P02461 1466 aaPredicted RBP31.14■■■□□ 2.58
LIMK2-206ENST00000462625 U2SURPO15042 1029 aaKnown RBP31.14■■■□□ 2.58
LIMK2-206ENST00000462625 HMGB2P26583 209 aaKnown RBP31.13■■■□□ 2.57
LIMK2-206ENST00000462625 DDX10Q13206 875 aaKnown RBP31.13■■■□□ 2.57
LIMK2-206ENST00000462625 SLC15A2Q16348 729 aa31.13■■■□□ 2.57
LIMK2-206ENST00000462625 SMARCC1Q92922 1105 aaPredicted RBP31.13■■■□□ 2.57
LIMK2-206ENST00000462625 DCAF5Q96JK2 942 aa31.13■■■□□ 2.57
LIMK2-206ENST00000462625 TMOD3Q9NYL9 352 aa31.13■■■□□ 2.57
LIMK2-206ENST00000462625 LRP5O75197 1615 aa31.13■■■□□ 2.57
LIMK2-206ENST00000462625 NUDCQ9Y266 331 aa31.12■■■□□ 2.57
LIMK2-206ENST00000462625 SRCAPQ6ZRS2 3230 aa31.11■■■□□ 2.57
LIMK2-206ENST00000462625 LRRC4BQ9NT99 713 aa31.11■■■□□ 2.57
LIMK2-206ENST00000462625 CCNL1Q9UK58 526 aaPredicted RBP31.1■■■□□ 2.57
LIMK2-206ENST00000462625 ERVV-2B6SEH9 535 aa31.09■■■□□ 2.57
LIMK2-206ENST00000462625 PIGBQ92521 554 aa31.09■■■□□ 2.57
LIMK2-206ENST00000462625 PAPPAQ13219 1627 aa31.09■■■□□ 2.57
LIMK2-206ENST00000462625 PALLDQ8WX93 1383 aa31.07■■■□□ 2.56
LIMK2-206ENST00000462625 AKAP4Q5JQC9 854 aa31.05■■■□□ 2.56
LIMK2-206ENST00000462625 SCN11AQ9UI33 1791 aa31.03■■■□□ 2.56
LIMK2-206ENST00000462625 KCNQ4P56696 695 aa31.03■■■□□ 2.56
LIMK2-206ENST00000462625 CABP4P57796 275 aa31.03■■■□□ 2.56
LIMK2-206ENST00000462625 CASZ1Q86V15 1759 aa31.02■■■□□ 2.56
LIMK2-206ENST00000462625 RALBP1Q15311 655 aa31.02■■■□□ 2.56
LIMK2-206ENST00000462625 VIRMAQ69YN4 1812 aaKnown RBP31.02■■■□□ 2.56
LIMK2-206ENST00000462625 C5P01031 1676 aa31.01■■■□□ 2.55
LIMK2-206ENST00000462625 SPON1Q9HCB6 807 aa31.01■■■□□ 2.55
LIMK2-206ENST00000462625 TAF1LQ8IZX4 1826 aa31.01■■■□□ 2.55
LIMK2-206ENST00000462625 KDM6AO15550 1401 aaPredicted RBP31■■■□□ 2.55
LIMK2-206ENST00000462625 AKT1S1Q96B36 256 aa31■■■□□ 2.55
LIMK2-206ENST00000462625 QSER1Q2KHR3 1735 aa31■■■□□ 2.55
LIMK2-206ENST00000462625 ZNF827Q17R98 1081 aa30.99■■■□□ 2.55
LIMK2-206ENST00000462625 TFCP2L1Q9NZI6 479 aa30.99■■■□□ 2.55
LIMK2-206ENST00000462625 U2AF1L5P0DN76 240 aaPredicted RBP30.98■■■□□ 2.55
LIMK2-206ENST00000462625 U2AF1Q01081 240 aaKnown RBP eCLIP30.98■■■□□ 2.55
LIMK2-206ENST00000462625 MTHFSDQ2M296 383 aaKnown RBP30.98■■■□□ 2.55
LIMK2-206ENST00000462625 ASAP1Q9ULH1 1129 aa30.98■■■□□ 2.55
LIMK2-206ENST00000462625 GAS2L2Q8NHY3 880 aa30.96■■■□□ 2.55
LIMK2-206ENST00000462625 ATG3Q9NT62 314 aa30.96■■■□□ 2.55
LIMK2-206ENST00000462625 LOC102724428A0A0B4J2F2 783 aa30.95■■■□□ 2.55
LIMK2-206ENST00000462625 SIK1P57059 783 aa30.95■■■□□ 2.55
LIMK2-206ENST00000462625 TUBGCP6Q96RT7 1819 aa30.94■■■□□ 2.54
LIMK2-206ENST00000462625 FCHSD2O94868 740 aa30.93■■■□□ 2.54
LIMK2-206ENST00000462625 PRKAR2BP31323 418 aa30.93■■■□□ 2.54
LIMK2-206ENST00000462625 NFATC2IPQ8NCF5 419 aa30.93■■■□□ 2.54
LIMK2-206ENST00000462625 PDGFDQ9GZP0 370 aaPredicted RBP30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms