RNA–Protein interactions for RNA: ENST00000462322.2

SMKR1-201, Transcript of small lysine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMKR1, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-201ENST00000462322 KAT6BQ8WYB5 2073 aa32.71■■■□□ 2.83
SMKR1-201ENST00000462322 PER1O15534 1290 aaPredicted RBP32.71■■■□□ 2.83
SMKR1-201ENST00000462322 RREB1Q92766 1687 aa32.71■■■□□ 2.83
SMKR1-201ENST00000462322 EYA1Q99502 592 aa32.7■■■□□ 2.83
SMKR1-201ENST00000462322 NHSQ6T4R5 1651 aa32.69■■■□□ 2.82
SMKR1-201ENST00000462322 EIF4A2Q14240 407 aaKnown RBP32.69■■■□□ 2.82
SMKR1-201ENST00000462322 R3HDM1Q15032 1099 aaKnown RBP32.69■■■□□ 2.82
SMKR1-201ENST00000462322 NBPF14Q5TI25 921 aa32.67■■■□□ 2.82
SMKR1-201ENST00000462322 RGPD3A6NKT7 1758 aaPredicted RBP32.67■■■□□ 2.82
SMKR1-201ENST00000462322 RGPD4Q7Z3J3 1758 aa32.67■■■□□ 2.82
SMKR1-201ENST00000462322 NUP188Q5SRE5 1749 aa32.66■■■□□ 2.82
SMKR1-201ENST00000462322 CC2D1BQ5T0F9 858 aaKnown RBP32.65■■■□□ 2.82
SMKR1-201ENST00000462322 NCAPD2Q15021 1401 aa32.65■■■□□ 2.82
SMKR1-201ENST00000462322 SHANK3Q9BYB0 1731 aa32.65■■■□□ 2.82
SMKR1-201ENST00000462322 PCDH11XQ9BZA7 1347 aa32.62■■■□□ 2.81
SMKR1-201ENST00000462322 PCDH11YQ9BZA8 1340 aa32.62■■■□□ 2.81
SMKR1-201ENST00000462322 PROM2Q8N271 834 aa32.61■■■□□ 2.81
SMKR1-201ENST00000462322 SYTL4Q96C24 671 aaPredicted RBP32.61■■■□□ 2.81
SMKR1-201ENST00000462322 TXNRD1Q16881 649 aa32.6■■■□□ 2.81
SMKR1-201ENST00000462322 SRCAPQ6ZRS2 3230 aa32.6■■■□□ 2.81
SMKR1-201ENST00000462322 PRIM1P49642 420 aaKnown RBP32.59■■■□□ 2.81
SMKR1-201ENST00000462322 CNGB1Q14028 1251 aaPredicted RBP32.59■■■□□ 2.81
SMKR1-201ENST00000462322 BTAF1O14981 1849 aa32.58■■■□□ 2.81
SMKR1-201ENST00000462322 SPG7Q9UQ90 795 aa32.57■■■□□ 2.8
SMKR1-201ENST00000462322 IGSF1Q8N6C5 1336 aa32.56■■■□□ 2.8
SMKR1-201ENST00000462322 DOT1LQ8TEK3 1739 aa32.56■■■□□ 2.8
SMKR1-201ENST00000462322 NPC1L1Q9UHC9 1359 aa32.56■■■□□ 2.8
SMKR1-201ENST00000462322 CYP27B1O15528 508 aa32.55■■■□□ 2.8
SMKR1-201ENST00000462322 MTHFSP49914 203 aa32.54■■■□□ 2.8
SMKR1-201ENST00000462322 PKD1L3Q7Z443 1732 aa32.53■■■□□ 2.8
SMKR1-201ENST00000462322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.52■■■□□ 2.8
SMKR1-201ENST00000462322 ANO8Q9HCE9 1232 aaPredicted RBP32.51■■■□□ 2.79
SMKR1-201ENST00000462322 IL13P35225 146 aa32.48■■■□□ 2.79
SMKR1-201ENST00000462322 STK32BQ9NY57 414 aa32.46■■■□□ 2.79
SMKR1-201ENST00000462322 AEBP1Q8IUX7 1158 aa32.45■■■□□ 2.79
SMKR1-201ENST00000462322 PLEKHG2Q9H7P9 1386 aa32.45■■■□□ 2.78
SMKR1-201ENST00000462322 NKX1-1Q15270 411 aaPredicted RBP32.44■■■□□ 2.78
SMKR1-201ENST00000462322 SULT6B1Q6IMI4 303 aa32.44■■■□□ 2.78
SMKR1-201ENST00000462322 IFNL2Q8IZJ0 200 aa32.44■■■□□ 2.78
SMKR1-201ENST00000462322 LRP5O75197 1615 aa32.43■■■□□ 2.78
SMKR1-201ENST00000462322 PHKG2P15735 406 aa32.42■■■□□ 2.78
SMKR1-201ENST00000462322 PLEKHO1Q53GL0 409 aaPredicted RBP32.42■■■□□ 2.78
SMKR1-201ENST00000462322 SLC27A3Q5K4L6 730 aa32.42■■■□□ 2.78
SMKR1-201ENST00000462322 MPRIPQ6WCQ1 1025 aa32.42■■■□□ 2.78
SMKR1-201ENST00000462322 LRRC4BQ9NT99 713 aa32.42■■■□□ 2.78
SMKR1-201ENST00000462322 SLC15A2Q16348 729 aa32.41■■■□□ 2.78
SMKR1-201ENST00000462322 DIAPH1O60610 1272 aaKnown RBP32.39■■■□□ 2.78
SMKR1-201ENST00000462322 AMOTQ4VCS5 1084 aa32.38■■■□□ 2.77
SMKR1-201ENST00000462322 TOGARAM1Q9Y4F4 1720 aa32.37■■■□□ 2.77
SMKR1-201ENST00000462322 KDRP35968 1356 aa32.37■■■□□ 2.77
SMKR1-201ENST00000462322 KCNQ4P56696 695 aa32.36■■■□□ 2.77
SMKR1-201ENST00000462322 ZNF530Q6P9A1 599 aaPredicted RBP32.36■■■□□ 2.77
SMKR1-201ENST00000462322 CCNL1Q9UK58 526 aaPredicted RBP32.35■■■□□ 2.77
SMKR1-201ENST00000462322 PAPPAQ13219 1627 aa32.34■■■□□ 2.77
SMKR1-201ENST00000462322 PIGBQ92521 554 aa32.34■■■□□ 2.77
SMKR1-201ENST00000462322 ITGB4P16144 1822 aa32.34■■■□□ 2.77
SMKR1-201ENST00000462322 LY75O60449 1722 aa32.34■■■□□ 2.77
SMKR1-201ENST00000462322 HSP90AB1P08238 724 aaKnown RBP32.32■■■□□ 2.76
SMKR1-201ENST00000462322 HMOX1P09601 288 aa32.32■■■□□ 2.76
SMKR1-201ENST00000462322 PDGFDQ9GZP0 370 aaPredicted RBP32.32■■■□□ 2.76
SMKR1-201ENST00000462322 TMOD3Q9NYL9 352 aa32.32■■■□□ 2.76
SMKR1-201ENST00000462322 ZNF827Q17R98 1081 aa32.31■■■□□ 2.76
SMKR1-201ENST00000462322 SPON1Q9HCB6 807 aa32.31■■■□□ 2.76
SMKR1-201ENST00000462322 PALLDQ8WX93 1383 aa32.31■■■□□ 2.76
SMKR1-201ENST00000462322 C1orf141Q5JVX7 400 aa32.3■■■□□ 2.76
SMKR1-201ENST00000462322 SMARCC1Q92922 1105 aaPredicted RBP32.3■■■□□ 2.76
SMKR1-201ENST00000462322 DCAF5Q96JK2 942 aa32.29■■■□□ 2.76
SMKR1-201ENST00000462322 COL3A1P02461 1466 aaPredicted RBP32.29■■■□□ 2.76
SMKR1-201ENST00000462322 CASZ1Q86V15 1759 aa32.28■■■□□ 2.76
SMKR1-201ENST00000462322 AKT1S1Q96B36 256 aa32.28■■■□□ 2.76
SMKR1-201ENST00000462322 CFAP53Q96M91 514 aa32.28■■■□□ 2.76
SMKR1-201ENST00000462322 U2SURPO15042 1029 aaKnown RBP32.27■■■□□ 2.76
SMKR1-201ENST00000462322 PPP2R1AP30153 589 aa32.27■■■□□ 2.76
SMKR1-201ENST00000462322 ERVV-2B6SEH9 535 aa32.25■■■□□ 2.75
SMKR1-201ENST00000462322 ZBTB7AO95365 584 aa32.25■■■□□ 2.75
SMKR1-201ENST00000462322 TFCP2L1Q9NZI6 479 aa32.23■■■□□ 2.75
SMKR1-201ENST00000462322 ASAP1Q9ULH1 1129 aa32.22■■■□□ 2.75
SMKR1-201ENST00000462322 KDM6AO15550 1401 aaPredicted RBP32.22■■■□□ 2.75
SMKR1-201ENST00000462322 HMGB2P26583 209 aaKnown RBP32.2■■■□□ 2.75
SMKR1-201ENST00000462322 ZEB1P37275 1124 aaPredicted RBP32.2■■■□□ 2.75
SMKR1-201ENST00000462322 CABP4P57796 275 aa32.2■■■□□ 2.75
SMKR1-201ENST00000462322 PPP1R1BQ9UD71 204 aaPredicted RBP32.2■■■□□ 2.75
SMKR1-201ENST00000462322 ATF5Q9Y2D1 282 aaPredicted RBP32.2■■■□□ 2.75
SMKR1-201ENST00000462322 AKAP4Q5JQC9 854 aa32.19■■■□□ 2.74
SMKR1-201ENST00000462322 DDX10Q13206 875 aaKnown RBP32.18■■■□□ 2.74
SMKR1-201ENST00000462322 ATG3Q9NT62 314 aa32.18■■■□□ 2.74
SMKR1-201ENST00000462322 MTFR1LQ9H019 292 aa32.17■■■□□ 2.74
SMKR1-201ENST00000462322 NUDCQ9Y266 331 aa32.17■■■□□ 2.74
SMKR1-201ENST00000462322 LOC102724428A0A0B4J2F2 783 aa32.16■■■□□ 2.74
SMKR1-201ENST00000462322 SIK1P57059 783 aa32.16■■■□□ 2.74
SMKR1-201ENST00000462322 MTHFSDQ2M296 383 aaKnown RBP32.16■■■□□ 2.74
SMKR1-201ENST00000462322 PNPLA7Q6ZV29 1317 aa32.16■■■□□ 2.74
SMKR1-201ENST00000462322 C5P01031 1676 aa32.15■■■□□ 2.74
SMKR1-201ENST00000462322 QSER1Q2KHR3 1735 aa32.13■■■□□ 2.73
SMKR1-201ENST00000462322 NFATC2IPQ8NCF5 419 aa32.12■■■□□ 2.73
SMKR1-201ENST00000462322 TAF1LQ8IZX4 1826 aa32.12■■■□□ 2.73
SMKR1-201ENST00000462322 TUBGCP6Q96RT7 1819 aa32.12■■■□□ 2.73
SMKR1-201ENST00000462322 PTGER2P43116 358 aa32.11■■■□□ 2.73
SMKR1-201ENST00000462322 U2AF1L5P0DN76 240 aaPredicted RBP32.1■■■□□ 2.73
SMKR1-201ENST00000462322 ATP6V1AP38606 617 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms