RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
SRRM1-204ENST00000461768 MARCH10Q8NA82 808 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-204ENST00000461768 FAM182BQ5T319 152 aa11.33□□□□□ -0.6
SRRM1-204ENST00000461768 SULT6B1Q6IMI4 303 aa11.33□□□□□ -0.6
SRRM1-204ENST00000461768 ZCRB1Q8TBF4 217 aaKnown RBP11.33□□□□□ -0.6
SRRM1-204ENST00000461768 BCL9O00512 1426 aa11.33□□□□□ -0.6
SRRM1-204ENST00000461768 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
SRRM1-204ENST00000461768 ANP32CO43423 234 aa11.32□□□□□ -0.6
SRRM1-204ENST00000461768 FAM196AQ6ZSG2 479 aa11.32□□□□□ -0.6
SRRM1-204ENST00000461768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.68e-8■■■□□ 14.7
SRRM1-204ENST00000461768 NUDCQ9Y266 331 aa11.32□□□□□ -0.6
SRRM1-204ENST00000461768 SOCS7O14512 581 aa11.31□□□□□ -0.6
SRRM1-204ENST00000461768 HMOX1P09601 288 aa11.31□□□□□ -0.6
SRRM1-204ENST00000461768 PCDH11XQ9BZA7 1347 aa11.31□□□□□ -0.6
SRRM1-204ENST00000461768 PCDH11YQ9BZA8 1340 aa11.31□□□□□ -0.6
SRRM1-204ENST00000461768 DDX54Q8TDD1 881 aaKnown RBP11.3□□□□□ -0.6
SRRM1-204ENST00000461768 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
SRRM1-204ENST00000461768 SPG7Q9UQ90 795 aa11.3□□□□□ -0.6
SRRM1-204ENST00000461768 SBF2Q86WG5 1849 aa11.3□□□□□ -0.6
SRRM1-204ENST00000461768 CYP27B1O15528 508 aa11.29□□□□□ -0.6
SRRM1-204ENST00000461768 U2AF1L5P0DN76 240 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-204ENST00000461768 U2AF1Q01081 240 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRRM1-204ENST00000461768 AMOTQ4VCS5 1084 aa11.29□□□□□ -0.6
SRRM1-204ENST00000461768 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
SRRM1-204ENST00000461768 PLEKHO1Q53GL0 409 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-204ENST00000461768 TNS1Q9HBL0 1735 aaKnown RBP11.28□□□□□ -0.6
SRRM1-204ENST00000461768 NHSQ6T4R5 1651 aa11.27□□□□□ -0.6
SRRM1-204ENST00000461768 FCHSD2O94868 740 aa11.27□□□□□ -0.61
SRRM1-204ENST00000461768 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
SRRM1-204ENST00000461768 CCDC125Q86Z20 511 aa11.27□□□□□ -0.61
SRRM1-204ENST00000461768 DOT1LQ8TEK3 1739 aa11.26□□□□□ -0.61
SRRM1-204ENST00000461768 TRIM37O94972 964 aa11.26□□□□□ -0.61
SRRM1-204ENST00000461768 PHKG2P15735 406 aa11.26□□□□□ -0.61
SRRM1-204ENST00000461768 PRKAR2BP31323 418 aa11.26□□□□□ -0.61
SRRM1-204ENST00000461768 ZNF530Q6P9A1 599 aaPredicted RBP11.26□□□□□ -0.61
SRRM1-204ENST00000461768 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
SRRM1-204ENST00000461768 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
SRRM1-204ENST00000461768 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
SRRM1-204ENST00000461768 CCDC184Q52MB2 194 aa11.25□□□□□ -0.61
SRRM1-204ENST00000461768 PHACTR3Q96KR7 559 aa11.25□□□□□ -0.61
SRRM1-204ENST00000461768 BCL11BQ9C0K0 894 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-204ENST00000461768 KCNQ2O43526 872 aa11.24□□□□□ -0.61
SRRM1-204ENST00000461768 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
SRRM1-204ENST00000461768 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
SRRM1-204ENST00000461768 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
SRRM1-204ENST00000461768 HSP90AB1P08238 724 aaKnown RBP11.23□□□□□ -0.61
SRRM1-204ENST00000461768 SF3B2Q13435 895 aaKnown RBP11.23□□□□□ -0.61
SRRM1-204ENST00000461768 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.619e-8■■□□□ 12.8
SRRM1-204ENST00000461768 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
SRRM1-204ENST00000461768 C1orf141Q5JVX7 400 aa11.23□□□□□ -0.61
SRRM1-204ENST00000461768 DIEXFQ68CQ4 756 aaKnown RBP11.23□□□□□ -0.61
SRRM1-204ENST00000461768 GAS2L2Q8NHY3 880 aa11.23□□□□□ -0.61
SRRM1-204ENST00000461768 MRS2Q9HD23 443 aa11.23□□□□□ -0.61
SRRM1-204ENST00000461768 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
SRRM1-204ENST00000461768 ADAMTS7Q9UKP4 1686 aa11.23□□□□□ -0.61
SRRM1-204ENST00000461768 BTAF1O14981 1849 aa11.23□□□□□ -0.61
SRRM1-204ENST00000461768 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
SRRM1-204ENST00000461768 ITGB4P16144 1822 aa11.22□□□□□ -0.61
SRRM1-204ENST00000461768 PRIM1P49642 420 aaKnown RBP11.22□□□□□ -0.61
SRRM1-204ENST00000461768 RGPD4Q7Z3J3 1758 aa11.22□□□□□ -0.61
SRRM1-204ENST00000461768 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
SRRM1-204ENST00000461768 PNNQ9H307 717 aaKnown RBP11.22□□□□□ -0.61
SRRM1-204ENST00000461768 SCN11AQ9UI33 1791 aa11.22□□□□□ -0.61
SRRM1-204ENST00000461768 ADAMTS8Q9UP79 889 aa11.22□□□□□ -0.61
SRRM1-204ENST00000461768 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.61
SRRM1-204ENST00000461768 MAP3K5Q99683 1374 aa11.21□□□□□ -0.61
SRRM1-204ENST00000461768 APBA3O96018 575 aa11.21□□□□□ -0.61
SRRM1-204ENST00000461768 MPRIPQ6WCQ1 1025 aa11.21□□□□□ -0.61
SRRM1-204ENST00000461768 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.61
SRRM1-204ENST00000461768 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.62
SRRM1-204ENST00000461768 MAPK8IP3Q9UPT6 1336 aa11.2□□□□□ -0.62
SRRM1-204ENST00000461768 ERVV-2B6SEH9 535 aa11.2□□□□□ -0.62
SRRM1-204ENST00000461768 BAG6P46379 1132 aa11.2□□□□□ -0.62
SRRM1-204ENST00000461768 DEFB132Q7Z7B7 95 aa11.2□□□□□ -0.62
SRRM1-204ENST00000461768 SYTL4Q96C24 671 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-204ENST00000461768 MRC1P22897 1456 aa11.19□□□□□ -0.62
SRRM1-204ENST00000461768 GNAT3A8MTJ3 354 aa11.19□□□□□ -0.62
SRRM1-204ENST00000461768 PLSCR1O15162 318 aa11.19□□□□□ -0.62
SRRM1-204ENST00000461768 NEFMP07197 916 aa11.19□□□□□ -0.62
SRRM1-204ENST00000461768 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
SRRM1-204ENST00000461768 RREB1Q92766 1687 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 DLG5Q8TDM6 1919 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
SRRM1-204ENST00000461768 EN1Q05925 392 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-204ENST00000461768 NFE2L2Q16236 605 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 CCDC146Q8IYE0 955 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 PIGBQ92521 554 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 RUNDC1Q96C34 613 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 LGR6Q9HBX8 967 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 TMOD3Q9NYL9 352 aa11.18□□□□□ -0.62
SRRM1-204ENST00000461768 CEMIPQ8WUJ3 1361 aa11.17□□□□□ -0.62
SRRM1-204ENST00000461768 CCER2I3L3R5 266 aa11.17□□□□□ -0.62
SRRM1-204ENST00000461768 HTATSF1O43719 755 aaKnown RBP11.17□□□□□ -0.62
SRRM1-204ENST00000461768 CABP4P57796 275 aa11.17□□□□□ -0.62
SRRM1-204ENST00000461768 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
SRRM1-204ENST00000461768 LY75O60449 1722 aa11.17□□□□□ -0.62
SRRM1-204ENST00000461768 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
SRRM1-204ENST00000461768 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
SRRM1-204ENST00000461768 NFATC2IPQ8NCF5 419 aa11.16□□□□□ -0.62
SRRM1-204ENST00000461768 SLC52A2Q9HAB3 445 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms