RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 IP6K1Q92551 441 aa19.57■□□□□ 0.72
PABPC4-208ENST00000461578 FAM208AQ9UK61 1670 aaKnown RBP19.56■□□□□ 0.72
PABPC4-208ENST00000461578 LY75O60449 1722 aa19.56■□□□□ 0.72
PABPC4-208ENST00000461578 A0A1W2PP64 1363 aa19.56■□□□□ 0.72
PABPC4-208ENST00000461578 ANKRD36BQ8N2N9 1353 aa19.56■□□□□ 0.72
PABPC4-208ENST00000461578 CCNL1Q9UK58 526 aaPredicted RBP19.55■□□□□ 0.72
PABPC4-208ENST00000461578 NSD2O96028 1365 aa19.55■□□□□ 0.72
PABPC4-208ENST00000461578 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
PABPC4-208ENST00000461578 MSL1Q68DK7 614 aa19.54■□□□□ 0.72
PABPC4-208ENST00000461578 CARD11Q9BXL7 1154 aa19.54■□□□□ 0.72
PABPC4-208ENST00000461578 TERF2IPQ9NYB0 399 aa19.54■□□□□ 0.72
PABPC4-208ENST00000461578 RGPD2P0DJD1 1756 aa19.53■□□□□ 0.72
PABPC4-208ENST00000461578 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
PABPC4-208ENST00000461578 FBLN1P23142 703 aa19.52■□□□□ 0.72
PABPC4-208ENST00000461578 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
PABPC4-208ENST00000461578 ZCRB1Q8TBF4 217 aaKnown RBP19.52■□□□□ 0.72
PABPC4-208ENST00000461578 MEGF6O75095 1541 aa19.51■□□□□ 0.71
PABPC4-208ENST00000461578 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
PABPC4-208ENST00000461578 HOXC9P31274 260 aa19.5■□□□□ 0.71
PABPC4-208ENST00000461578 AMPHP49418 695 aa19.5■□□□□ 0.71
PABPC4-208ENST00000461578 USP47Q96K76 1375 aa19.49■□□□□ 0.71
PABPC4-208ENST00000461578 ATP10DQ9P241 1426 aa19.49■□□□□ 0.71
PABPC4-208ENST00000461578 COG3Q96JB2 828 aa19.48■□□□□ 0.71
PABPC4-208ENST00000461578 CEP350Q5VT06 3117 aa19.47■□□□□ 0.71
PABPC4-208ENST00000461578 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
PABPC4-208ENST00000461578 ZNF526Q8TF50 670 aaPredicted RBP19.45■□□□□ 0.7
PABPC4-208ENST00000461578 C5P01031 1676 aa19.45■□□□□ 0.7
PABPC4-208ENST00000461578 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
PABPC4-208ENST00000461578 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
PABPC4-208ENST00000461578 GPBP1L1Q9HC44 474 aaPredicted RBP19.44■□□□□ 0.7
PABPC4-208ENST00000461578 RRS1Q15050 365 aaKnown RBP19.43■□□□□ 0.7
PABPC4-208ENST00000461578 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
PABPC4-208ENST00000461578 RAPGEF4Q8WZA2 1011 aa19.41■□□□□ 0.7
PABPC4-208ENST00000461578 CD2APQ9Y5K6 639 aa19.41■□□□□ 0.7
PABPC4-208ENST00000461578 TAF1LQ8IZX4 1826 aa19.4■□□□□ 0.7
PABPC4-208ENST00000461578 PUS7Q96PZ0 661 aaKnown RBP19.4■□□□□ 0.7
PABPC4-208ENST00000461578 PALLDQ8WX93 1383 aa19.4■□□□□ 0.7
PABPC4-208ENST00000461578 TATP17735 454 aaPredicted RBP19.39■□□□□ 0.69
PABPC4-208ENST00000461578 MPRIPQ6WCQ1 1025 aa19.39■□□□□ 0.69
PABPC4-208ENST00000461578 RTL1A6NKG5 1358 aa19.39■□□□□ 0.69
PABPC4-208ENST00000461578 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
PABPC4-208ENST00000461578 SMG6Q86US8 1419 aaKnown RBP19.38■□□□□ 0.69
PABPC4-208ENST00000461578 ADCY9O60503 1353 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 PHF14O94880 888 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 AMIGO3Q86WK7 504 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 C4BP0C0L5 1744 aa19.37■□□□□ 0.69
PABPC4-208ENST00000461578 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
PABPC4-208ENST00000461578 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
PABPC4-208ENST00000461578 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
PABPC4-208ENST00000461578 HSPA6P17066 643 aa19.36■□□□□ 0.69
PABPC4-208ENST00000461578 AK7Q96M32 723 aa19.36■□□□□ 0.69
PABPC4-208ENST00000461578 ST20-MTHFSA0A0A6YYL1 179 aa19.35■□□□□ 0.69
PABPC4-208ENST00000461578 TESK2Q96S53 571 aa19.35■□□□□ 0.69
PABPC4-208ENST00000461578 TOGARAM1Q9Y4F4 1720 aa19.34■□□□□ 0.69
PABPC4-208ENST00000461578 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
PABPC4-208ENST00000461578 ITGB4P16144 1822 aa19.33■□□□□ 0.69
PABPC4-208ENST00000461578 HSP90AB2PQ58FF8 381 aa19.33■□□□□ 0.68
PABPC4-208ENST00000461578 FYB1O15117 783 aa19.32■□□□□ 0.68
PABPC4-208ENST00000461578 CYP27B1O15528 508 aa19.32■□□□□ 0.68
PABPC4-208ENST00000461578 UBR3Q6ZT12 1888 aa19.32■□□□□ 0.68
PABPC4-208ENST00000461578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.31■□□□□ 0.68
PABPC4-208ENST00000461578 HMGB2P26583 209 aaKnown RBP19.31■□□□□ 0.68
PABPC4-208ENST00000461578 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
PABPC4-208ENST00000461578 INSRP06213 1382 aa19.3■□□□□ 0.68
PABPC4-208ENST00000461578 PIGBQ92521 554 aa19.29■□□□□ 0.68
PABPC4-208ENST00000461578 FLT4P35916 1363 aa19.28■□□□□ 0.68
PABPC4-208ENST00000461578 NSD3Q9BZ95 1437 aa19.27■□□□□ 0.68
PABPC4-208ENST00000461578 KIF3CO14782 793 aa19.27■□□□□ 0.68
PABPC4-208ENST00000461578 LINC00116Q8NCU8 138 aa19.27■□□□□ 0.68
PABPC4-208ENST00000461578 KIF20BQ96Q89 1820 aa19.27■□□□□ 0.68
PABPC4-208ENST00000461578 PKD1L3Q7Z443 1732 aa19.26■□□□□ 0.67
PABPC4-208ENST00000461578 LOC102724428A0A0B4J2F2 783 aa19.25■□□□□ 0.67
PABPC4-208ENST00000461578 SSFA2P28290 1259 aa19.25■□□□□ 0.67
PABPC4-208ENST00000461578 SIK1P57059 783 aa19.25■□□□□ 0.67
PABPC4-208ENST00000461578 MAP2P11137 1827 aaKnown RBP19.25■□□□□ 0.67
PABPC4-208ENST00000461578 GNPATO15228 680 aa19.24■□□□□ 0.67
PABPC4-208ENST00000461578 EMILIN1Q9Y6C2 1016 aa19.24■□□□□ 0.67
PABPC4-208ENST00000461578 PPM1GO15355 546 aaPredicted RBP19.23■□□□□ 0.67
PABPC4-208ENST00000461578 SLC24A1O60721 1099 aa19.22■□□□□ 0.67
PABPC4-208ENST00000461578 MMP10P09238 476 aa19.22■□□□□ 0.67
PABPC4-208ENST00000461578 TMF1P82094 1093 aa19.22■□□□□ 0.67
PABPC4-208ENST00000461578 ITPK1Q13572 414 aa19.22■□□□□ 0.67
PABPC4-208ENST00000461578 TMOD3Q9NYL9 352 aa19.22■□□□□ 0.67
PABPC4-208ENST00000461578 ASAP1Q9ULH1 1129 aa19.22■□□□□ 0.67
PABPC4-208ENST00000461578 ATP6V1AP38606 617 aa19.21■□□□□ 0.67
PABPC4-208ENST00000461578 SPG7Q9UQ90 795 aa19.21■□□□□ 0.67
PABPC4-208ENST00000461578 N4BP2Q86UW6 1770 aaPredicted RBP19.21■□□□□ 0.67
PABPC4-208ENST00000461578 CICQ96RK0 1608 aaPredicted RBP19.21■□□□□ 0.67
PABPC4-208ENST00000461578 KIF24Q5T7B8 1368 aa19.2■□□□□ 0.66
PABPC4-208ENST00000461578 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
PABPC4-208ENST00000461578 BCS1LQ9Y276 419 aa19.2■□□□□ 0.66
PABPC4-208ENST00000461578 PXDNLA1KZ92 1463 aa19.2■□□□□ 0.66
PABPC4-208ENST00000461578 APLP1P51693 650 aa19.19■□□□□ 0.66
PABPC4-208ENST00000461578 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
PABPC4-208ENST00000461578 A0A0G2JLW4 131 aa19.17■□□□□ 0.66
PABPC4-208ENST00000461578 NCAPD2Q15021 1401 aa19.17■□□□□ 0.66
PABPC4-208ENST00000461578 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms