RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 SPG7Q9UQ90 795 aa12.88□□□□□ -0.35
C9orf78-203ENST00000461539 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
C9orf78-203ENST00000461539 LTN1O94822 1766 aa12.87□□□□□ -0.35
C9orf78-203ENST00000461539 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
C9orf78-203ENST00000461539 NFE2L2Q16236 605 aa12.87□□□□□ -0.35
C9orf78-203ENST00000461539 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
C9orf78-203ENST00000461539 ZCRB1Q8TBF4 217 aaKnown RBP12.87□□□□□ -0.35
C9orf78-203ENST00000461539 ATRNO75882 1429 aa12.87□□□□□ -0.35
C9orf78-203ENST00000461539 EXOC5O00471 708 aa12.86□□□□□ -0.35
C9orf78-203ENST00000461539 RIPK4P57078 832 aa12.86□□□□□ -0.35
C9orf78-203ENST00000461539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
C9orf78-203ENST00000461539 MEGF6O75095 1541 aa12.86□□□□□ -0.35
C9orf78-203ENST00000461539 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
C9orf78-203ENST00000461539 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
C9orf78-203ENST00000461539 OVOS2A0A0G2JMS6 1433 aa12.85□□□□□ -0.35
C9orf78-203ENST00000461539 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
C9orf78-203ENST00000461539 DDB1Q16531 1140 aa12.84□□□□□ -0.35
C9orf78-203ENST00000461539 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
C9orf78-203ENST00000461539 RGS17Q9UGC6 210 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-203ENST00000461539 DISP2A7MBM2 1401 aa12.84□□□□□ -0.35
C9orf78-203ENST00000461539 RXRBP28702 533 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 AKAP4Q5JQC9 854 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 IFNL2Q8IZJ0 200 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 NGEFQ8N5V2 710 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 PCDH11XQ9BZA7 1347 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 PCDH11YQ9BZA8 1340 aa12.83□□□□□ -0.36
C9orf78-203ENST00000461539 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 CYP27B1O15528 508 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 PHKG2P15735 406 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 POTEAQ6S8J7 498 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 PLCH1Q4KWH8 1693 aa12.82□□□□□ -0.36
C9orf78-203ENST00000461539 MAP3K5Q99683 1374 aa12.81□□□□□ -0.36
C9orf78-203ENST00000461539 ONECUT3O60422 494 aaPredicted RBP12.81□□□□□ -0.36
C9orf78-203ENST00000461539 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
C9orf78-203ENST00000461539 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
C9orf78-203ENST00000461539 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
C9orf78-203ENST00000461539 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
C9orf78-203ENST00000461539 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
C9orf78-203ENST00000461539 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
C9orf78-203ENST00000461539 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
C9orf78-203ENST00000461539 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
C9orf78-203ENST00000461539 MPRIPQ6WCQ1 1025 aa12.8□□□□□ -0.36
C9orf78-203ENST00000461539 MCM10Q7L590 875 aa12.8□□□□□ -0.36
C9orf78-203ENST00000461539 WWC1Q8IX03 1113 aa12.8□□□□□ -0.36
C9orf78-203ENST00000461539 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
C9orf78-203ENST00000461539 NRAPQ86VF7 1730 aa12.79□□□□□ -0.36
C9orf78-203ENST00000461539 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
C9orf78-203ENST00000461539 ZBED9Q6R2W3 1325 aa12.79□□□□□ -0.36
C9orf78-203ENST00000461539 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
C9orf78-203ENST00000461539 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
C9orf78-203ENST00000461539 RNMTO43148 476 aaKnown RBP12.78□□□□□ -0.36
C9orf78-203ENST00000461539 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
C9orf78-203ENST00000461539 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
C9orf78-203ENST00000461539 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
C9orf78-203ENST00000461539 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
C9orf78-203ENST00000461539 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
C9orf78-203ENST00000461539 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
C9orf78-203ENST00000461539 GOLGA2Q08379 1002 aa12.76□□□□□ -0.37
C9orf78-203ENST00000461539 TEFQ10587 303 aa12.76□□□□□ -0.37
C9orf78-203ENST00000461539 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
C9orf78-203ENST00000461539 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
C9orf78-203ENST00000461539 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
C9orf78-203ENST00000461539 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
C9orf78-203ENST00000461539 GLI3P10071 1580 aa12.76□□□□□ -0.37
C9orf78-203ENST00000461539 CABP4P57796 275 aa12.75□□□□□ -0.37
C9orf78-203ENST00000461539 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
C9orf78-203ENST00000461539 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
C9orf78-203ENST00000461539 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
C9orf78-203ENST00000461539 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
C9orf78-203ENST00000461539 IL16Q14005 1332 aa12.73□□□□□ -0.37
C9orf78-203ENST00000461539 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
C9orf78-203ENST00000461539 E9PSI1 815 aa12.73□□□□□ -0.37
C9orf78-203ENST00000461539 TAF7Q15545 349 aaPredicted RBP12.73□□□□□ -0.37
C9orf78-203ENST00000461539 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
C9orf78-203ENST00000461539 CDCA7LQ96GN5 454 aa12.73□□□□□ -0.37
C9orf78-203ENST00000461539 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
C9orf78-203ENST00000461539 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
C9orf78-203ENST00000461539 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
C9orf78-203ENST00000461539 GNAI1P63096 354 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
C9orf78-203ENST00000461539 IFT57Q9NWB7 429 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 MIS18AQ9NYP9 233 aa12.72□□□□□ -0.37
C9orf78-203ENST00000461539 RGS12O14924 1447 aa12.71□□□□□ -0.37
C9orf78-203ENST00000461539 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.37
C9orf78-203ENST00000461539 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
C9orf78-203ENST00000461539 SLFN5Q08AF3 891 aa12.71□□□□□ -0.37
C9orf78-203ENST00000461539 CFAP44Q96MT7 982 aa12.71□□□□□ -0.37
C9orf78-203ENST00000461539 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
C9orf78-203ENST00000461539 CHL1O00533 1208 aa12.7□□□□□ -0.38
C9orf78-203ENST00000461539 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
C9orf78-203ENST00000461539 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
C9orf78-203ENST00000461539 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
C9orf78-203ENST00000461539 KCNQ2O43526 872 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms