RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-204ENST00000461507 PKD1L3Q7Z443 1732 aa17.57■□□□□ 0.4
FDPS-204ENST00000461507 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
FDPS-204ENST00000461507 NSD2O96028 1365 aa17.55■□□□□ 0.4
FDPS-204ENST00000461507 CGNL1Q0VF96 1302 aa17.55■□□□□ 0.4
FDPS-204ENST00000461507 SLC15A2Q16348 729 aa17.54■□□□□ 0.4
FDPS-204ENST00000461507 NBPF6Q5VWK0 638 aa17.54■□□□□ 0.4
FDPS-204ENST00000461507 NBPF4Q96M43 638 aa17.54■□□□□ 0.4
FDPS-204ENST00000461507 STK32BQ9NY57 414 aa17.54■□□□□ 0.4
FDPS-204ENST00000461507 MAP2P11137 1827 aaKnown RBP17.54■□□□□ 0.4
FDPS-204ENST00000461507 COL24A1Q17RW2 1714 aa17.53■□□□□ 0.4
FDPS-204ENST00000461507 TUBGCP6Q96RT7 1819 aa17.53■□□□□ 0.4
FDPS-204ENST00000461507 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
FDPS-204ENST00000461507 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
FDPS-204ENST00000461507 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
FDPS-204ENST00000461507 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
FDPS-204ENST00000461507 TOGARAM1Q9Y4F4 1720 aa17.51■□□□□ 0.39
FDPS-204ENST00000461507 PTGER2P43116 358 aa17.49■□□□□ 0.39
FDPS-204ENST00000461507 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
FDPS-204ENST00000461507 LRRC4BQ9NT99 713 aa17.49■□□□□ 0.39
FDPS-204ENST00000461507 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
FDPS-204ENST00000461507 USHBP1Q8N6Y0 703 aa17.48■□□□□ 0.39
FDPS-204ENST00000461507 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
FDPS-204ENST00000461507 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
FDPS-204ENST00000461507 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
FDPS-204ENST00000461507 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
FDPS-204ENST00000461507 PPP1R1BQ9UD71 204 aaPredicted RBP17.47■□□□□ 0.39
FDPS-204ENST00000461507 ITGB4P16144 1822 aa17.47■□□□□ 0.39
FDPS-204ENST00000461507 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
FDPS-204ENST00000461507 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
FDPS-204ENST00000461507 PLEKHG2Q9H7P9 1386 aa17.46■□□□□ 0.39
FDPS-204ENST00000461507 ZBTB7AO95365 584 aa17.46■□□□□ 0.39
FDPS-204ENST00000461507 TATP17735 454 aaPredicted RBP17.46■□□□□ 0.39
FDPS-204ENST00000461507 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
FDPS-204ENST00000461507 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
FDPS-204ENST00000461507 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
FDPS-204ENST00000461507 C5P01031 1676 aa17.45■□□□□ 0.38
FDPS-204ENST00000461507 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
FDPS-204ENST00000461507 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
FDPS-204ENST00000461507 POLKQ9UBT6 870 aa17.43■□□□□ 0.38
FDPS-204ENST00000461507 MAP3K5Q99683 1374 aa17.42■□□□□ 0.38
FDPS-204ENST00000461507 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
FDPS-204ENST00000461507 PANK3Q9H999 370 aa17.42■□□□□ 0.38
FDPS-204ENST00000461507 CYP27B1O15528 508 aa17.41■□□□□ 0.38
FDPS-204ENST00000461507 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
FDPS-204ENST00000461507 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
FDPS-204ENST00000461507 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.37
FDPS-204ENST00000461507 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
FDPS-204ENST00000461507 EYA1Q99502 592 aa17.39■□□□□ 0.37
FDPS-204ENST00000461507 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.39■□□□□ 0.376e-9■□□□□ 10.6
FDPS-204ENST00000461507 CNGB1Q14028 1251 aaPredicted RBP17.38■□□□□ 0.37
FDPS-204ENST00000461507 PPM1GO15355 546 aaPredicted RBP17.37■□□□□ 0.37
FDPS-204ENST00000461507 CCNL1Q9UK58 526 aaPredicted RBP17.37■□□□□ 0.37
FDPS-204ENST00000461507 KNSTRNQ9Y448 316 aa17.37■□□□□ 0.37
FDPS-204ENST00000461507 PALLDQ8WX93 1383 aa17.37■□□□□ 0.37
FDPS-204ENST00000461507 TNNT2P45379 298 aaPredicted RBP17.36■□□□□ 0.37
FDPS-204ENST00000461507 EIF4A2Q14240 407 aaKnown RBP17.36■□□□□ 0.37
FDPS-204ENST00000461507 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
FDPS-204ENST00000461507 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
FDPS-204ENST00000461507 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
FDPS-204ENST00000461507 KCNQ4P56696 695 aa17.35■□□□□ 0.37
FDPS-204ENST00000461507 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
FDPS-204ENST00000461507 FHDC1Q9C0D6 1143 aaPredicted RBP17.35■□□□□ 0.37
FDPS-204ENST00000461507 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
FDPS-204ENST00000461507 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
FDPS-204ENST00000461507 ZNF831Q5JPB2 1677 aa17.34■□□□□ 0.37
FDPS-204ENST00000461507 ARXQ96QS3 562 aa17.34■□□□□ 0.37
FDPS-204ENST00000461507 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.36
FDPS-204ENST00000461507 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
FDPS-204ENST00000461507 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
FDPS-204ENST00000461507 DCAF8L1A6NGE4 600 aa17.31■□□□□ 0.36
FDPS-204ENST00000461507 PHKG2P15735 406 aa17.31■□□□□ 0.36
FDPS-204ENST00000461507 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
FDPS-204ENST00000461507 CHD4Q14839 1912 aa17.31■□□□□ 0.36
FDPS-204ENST00000461507 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
FDPS-204ENST00000461507 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
FDPS-204ENST00000461507 PIGBQ92521 554 aa17.3■□□□□ 0.36
FDPS-204ENST00000461507 KDRP35968 1356 aa17.29■□□□□ 0.36
FDPS-204ENST00000461507 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
FDPS-204ENST00000461507 YY1P25490 414 aa17.28■□□□□ 0.36
FDPS-204ENST00000461507 POLD1P28340 1107 aa17.28■□□□□ 0.36
FDPS-204ENST00000461507 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
FDPS-204ENST00000461507 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
FDPS-204ENST00000461507 CICQ96RK0 1608 aaPredicted RBP17.27■□□□□ 0.36
FDPS-204ENST00000461507 COL5A3P25940 1745 aaPredicted RBP17.27■□□□□ 0.35
FDPS-204ENST00000461507 FLAD1Q8NFF5 587 aa17.26■□□□□ 0.35
FDPS-204ENST00000461507 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
FDPS-204ENST00000461507 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
FDPS-204ENST00000461507 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
FDPS-204ENST00000461507 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
FDPS-204ENST00000461507 SIK1P57059 783 aa17.24■□□□□ 0.35
FDPS-204ENST00000461507 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
FDPS-204ENST00000461507 PER1O15534 1290 aaPredicted RBP17.23■□□□□ 0.35
FDPS-204ENST00000461507 HSP90AB1P08238 724 aaKnown RBP17.23■□□□□ 0.35
FDPS-204ENST00000461507 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
FDPS-204ENST00000461507 IL13P35225 146 aa17.22■□□□□ 0.35
FDPS-204ENST00000461507 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
FDPS-204ENST00000461507 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
FDPS-204ENST00000461507 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
FDPS-204ENST00000461507 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
FDPS-204ENST00000461507 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms