RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 COL23A1Q86Y22 540 aaPredicted RBP16.98■□□□□ 0.31
HCFC1-204ENST00000461098 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
HCFC1-204ENST00000461098 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
HCFC1-204ENST00000461098 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
HCFC1-204ENST00000461098 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
HCFC1-204ENST00000461098 ATP10DQ9P241 1426 aa16.96■□□□□ 0.3
HCFC1-204ENST00000461098 A0A1W2PP64 1363 aa16.95■□□□□ 0.3
HCFC1-204ENST00000461098 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
HCFC1-204ENST00000461098 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
HCFC1-204ENST00000461098 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
HCFC1-204ENST00000461098 MEGF6O75095 1541 aa16.94■□□□□ 0.3
HCFC1-204ENST00000461098 ADCY9O60503 1353 aa16.93■□□□□ 0.3
HCFC1-204ENST00000461098 FBLN1P23142 703 aa16.93■□□□□ 0.3
HCFC1-204ENST00000461098 HDGFL2Q7Z4V5 671 aaPredicted RBP16.93■□□□□ 0.3
HCFC1-204ENST00000461098 MSL1Q68DK7 614 aa16.92■□□□□ 0.3
HCFC1-204ENST00000461098 ZCRB1Q8TBF4 217 aaKnown RBP16.92■□□□□ 0.3
HCFC1-204ENST00000461098 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
HCFC1-204ENST00000461098 HOXC9P31274 260 aa16.91■□□□□ 0.3
HCFC1-204ENST00000461098 MSH5O43196 834 aa16.9■□□□□ 0.3
HCFC1-204ENST00000461098 C5P01031 1676 aa16.9■□□□□ 0.3
HCFC1-204ENST00000461098 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
HCFC1-204ENST00000461098 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
HCFC1-204ENST00000461098 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
HCFC1-204ENST00000461098 TAF1LQ8IZX4 1826 aa16.89■□□□□ 0.29
HCFC1-204ENST00000461098 USP47Q96K76 1375 aa16.89■□□□□ 0.29
HCFC1-204ENST00000461098 HSPA6P17066 643 aa16.88■□□□□ 0.29
HCFC1-204ENST00000461098 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
HCFC1-204ENST00000461098 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
HCFC1-204ENST00000461098 AMIGO3Q86WK7 504 aa16.87■□□□□ 0.29
HCFC1-204ENST00000461098 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
HCFC1-204ENST00000461098 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
HCFC1-204ENST00000461098 CARD11Q9BXL7 1154 aa16.86■□□□□ 0.29
HCFC1-204ENST00000461098 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
HCFC1-204ENST00000461098 AMPHP49418 695 aa16.84■□□□□ 0.29
HCFC1-204ENST00000461098 ZNF526Q8TF50 670 aaPredicted RBP16.84■□□□□ 0.29
HCFC1-204ENST00000461098 COG3Q96JB2 828 aa16.84■□□□□ 0.29
HCFC1-204ENST00000461098 CGNL1Q0VF96 1302 aa16.83■□□□□ 0.28
HCFC1-204ENST00000461098 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.28
HCFC1-204ENST00000461098 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
HCFC1-204ENST00000461098 RTL1A6NKG5 1358 aa16.82■□□□□ 0.28
HCFC1-204ENST00000461098 PALLDQ8WX93 1383 aa16.82■□□□□ 0.28
HCFC1-204ENST00000461098 SMIM5Q71RC9 77 aa16.82■□□□□ 0.28
HCFC1-204ENST00000461098 FLAD1Q8NFF5 587 aa16.82■□□□□ 0.28
HCFC1-204ENST00000461098 TESK2Q96S53 571 aa16.82■□□□□ 0.28
HCFC1-204ENST00000461098 KIF3CO14782 793 aa16.81■□□□□ 0.28
HCFC1-204ENST00000461098 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
HCFC1-204ENST00000461098 UBR3Q6ZT12 1888 aa16.81■□□□□ 0.28
HCFC1-204ENST00000461098 IGSF1Q8N6C5 1336 aa16.8■□□□□ 0.28
HCFC1-204ENST00000461098 ITGB4P16144 1822 aa16.8■□□□□ 0.28
HCFC1-204ENST00000461098 CYP27B1O15528 508 aa16.79■□□□□ 0.28
HCFC1-204ENST00000461098 WWC3Q9ULE0 1092 aa16.79■□□□□ 0.28
HCFC1-204ENST00000461098 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
HCFC1-204ENST00000461098 FYB1O15117 783 aa16.78■□□□□ 0.28
HCFC1-204ENST00000461098 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
HCFC1-204ENST00000461098 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
HCFC1-204ENST00000461098 CICQ96RK0 1608 aaPredicted RBP16.78■□□□□ 0.28
HCFC1-204ENST00000461098 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
HCFC1-204ENST00000461098 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
HCFC1-204ENST00000461098 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
HCFC1-204ENST00000461098 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
HCFC1-204ENST00000461098 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.76■□□□□ 0.27
HCFC1-204ENST00000461098 PHF14O94880 888 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 DNAJC5GQ8N7S2 189 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 PIGBQ92521 554 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 AK7Q96M32 723 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 PKD1L3Q7Z443 1732 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 KIAA1551Q9HCM1 1747 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 INSRP06213 1382 aa16.75■□□□□ 0.27
HCFC1-204ENST00000461098 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
HCFC1-204ENST00000461098 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
HCFC1-204ENST00000461098 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
HCFC1-204ENST00000461098 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
HCFC1-204ENST00000461098 SSFA2P28290 1259 aa16.73■□□□□ 0.27
HCFC1-204ENST00000461098 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
HCFC1-204ENST00000461098 LINC00116Q8NCU8 138 aa16.73■□□□□ 0.27
HCFC1-204ENST00000461098 SMARCC1Q92922 1105 aaPredicted RBP16.73■□□□□ 0.27
HCFC1-204ENST00000461098 PCNTO95613 3336 aa16.73■□□□□ 0.27
HCFC1-204ENST00000461098 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
HCFC1-204ENST00000461098 NCAPD2Q15021 1401 aa16.71■□□□□ 0.27
HCFC1-204ENST00000461098 PXDNLA1KZ92 1463 aa16.71■□□□□ 0.27
HCFC1-204ENST00000461098 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
HCFC1-204ENST00000461098 FLT4P35916 1363 aa16.7■□□□□ 0.26
HCFC1-204ENST00000461098 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
HCFC1-204ENST00000461098 APLP1P51693 650 aa16.7■□□□□ 0.26
HCFC1-204ENST00000461098 SIK1P57059 783 aa16.7■□□□□ 0.26
HCFC1-204ENST00000461098 ITPK1Q13572 414 aa16.7■□□□□ 0.26
HCFC1-204ENST00000461098 KIF24Q5T7B8 1368 aa16.69■□□□□ 0.26
HCFC1-204ENST00000461098 N4BP2Q86UW6 1770 aaPredicted RBP16.69■□□□□ 0.26
HCFC1-204ENST00000461098 ASAP1Q9ULH1 1129 aa16.68■□□□□ 0.26
HCFC1-204ENST00000461098 TOMM70O94826 608 aa16.67■□□□□ 0.26
HCFC1-204ENST00000461098 MMP10P09238 476 aa16.67■□□□□ 0.26
HCFC1-204ENST00000461098 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
HCFC1-204ENST00000461098 GNPATO15228 680 aa16.66■□□□□ 0.26
HCFC1-204ENST00000461098 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
HCFC1-204ENST00000461098 A0A0G2JLW4 131 aa16.65■□□□□ 0.26
HCFC1-204ENST00000461098 TGFB2P61812 414 aa16.65■□□□□ 0.26
HCFC1-204ENST00000461098 NMRK2Q9NPI5 230 aa16.65■□□□□ 0.26
HCFC1-204ENST00000461098 BRCA1P38398 1863 aaKnown RBP16.65■□□□□ 0.26
HCFC1-204ENST00000461098 C10orf71Q711Q0 1435 aa16.64■□□□□ 0.25
HCFC1-204ENST00000461098 SLC24A1O60721 1099 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms