RNA–Protein interactions for RNA: ENST00000460227.4

MECP2-206, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-206ENST00000460227 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
MECP2-206ENST00000460227 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
MECP2-206ENST00000460227 PDE3BQ13370 1112 aa17.19■□□□□ 0.34
MECP2-206ENST00000460227 ZCRB1Q8TBF4 217 aaKnown RBP17.19■□□□□ 0.34
MECP2-206ENST00000460227 KDRP35968 1356 aa17.18■□□□□ 0.34
MECP2-206ENST00000460227 HMOX1P09601 288 aa17.18■□□□□ 0.34
MECP2-206ENST00000460227 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
MECP2-206ENST00000460227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
MECP2-206ENST00000460227 FCHSD2O94868 740 aa17.17■□□□□ 0.34
MECP2-206ENST00000460227 U2AF1L5P0DN76 240 aaPredicted RBP17.17■□□□□ 0.34
MECP2-206ENST00000460227 U2AF1Q01081 240 aaKnown RBP eCLIP17.17■□□□□ 0.34
MECP2-206ENST00000460227 MARCH10Q8NA82 808 aaPredicted RBP17.17■□□□□ 0.34
MECP2-206ENST00000460227 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
MECP2-206ENST00000460227 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
MECP2-206ENST00000460227 SPG7Q9UQ90 795 aa17.15■□□□□ 0.34
MECP2-206ENST00000460227 MEGF6O75095 1541 aa17.15■□□□□ 0.34
MECP2-206ENST00000460227 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
MECP2-206ENST00000460227 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
MECP2-206ENST00000460227 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
MECP2-206ENST00000460227 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
MECP2-206ENST00000460227 PLEKHG2Q9H7P9 1386 aa17.14■□□□□ 0.33
MECP2-206ENST00000460227 THSD7AQ9UPZ6 1657 aa17.13■□□□□ 0.33
MECP2-206ENST00000460227 FAM196AQ6ZSG2 479 aa17.13■□□□□ 0.33
MECP2-206ENST00000460227 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
MECP2-206ENST00000460227 CYP27B1O15528 508 aa17.12■□□□□ 0.33
MECP2-206ENST00000460227 PNISRQ8TF01 805 aaKnown RBP17.12■□□□□ 0.33
MECP2-206ENST00000460227 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
MECP2-206ENST00000460227 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
MECP2-206ENST00000460227 PHACTR3Q96KR7 559 aa17.11■□□□□ 0.33
MECP2-206ENST00000460227 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
MECP2-206ENST00000460227 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
MECP2-206ENST00000460227 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
MECP2-206ENST00000460227 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
MECP2-206ENST00000460227 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
MECP2-206ENST00000460227 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
MECP2-206ENST00000460227 PHKG2P15735 406 aa17.09■□□□□ 0.33
MECP2-206ENST00000460227 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
MECP2-206ENST00000460227 MIER1Q8N108 512 aa17.09■□□□□ 0.33
MECP2-206ENST00000460227 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
MECP2-206ENST00000460227 RGPD2P0DJD1 1756 aa17.09■□□□□ 0.33
MECP2-206ENST00000460227 BCL9O00512 1426 aa17.08■□□□□ 0.32
MECP2-206ENST00000460227 PCDH11XQ9BZA7 1347 aa17.08■□□□□ 0.32
MECP2-206ENST00000460227 PCDH11YQ9BZA8 1340 aa17.08■□□□□ 0.32
MECP2-206ENST00000460227 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
MECP2-206ENST00000460227 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.32
MECP2-206ENST00000460227 ZNF530Q6P9A1 599 aaPredicted RBP17.07■□□□□ 0.32
MECP2-206ENST00000460227 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
MECP2-206ENST00000460227 PARP4Q9UKK3 1724 aaKnown RBP17.06■□□□□ 0.32
MECP2-206ENST00000460227 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
MECP2-206ENST00000460227 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
MECP2-206ENST00000460227 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
MECP2-206ENST00000460227 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
MECP2-206ENST00000460227 EP400Q96L91 3159 aa17.04■□□□□ 0.32
MECP2-206ENST00000460227 KCNQ2O43526 872 aa17.03■□□□□ 0.32
MECP2-206ENST00000460227 TRIM37O94972 964 aa17.03■□□□□ 0.32
MECP2-206ENST00000460227 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
MECP2-206ENST00000460227 RUNDC1Q96C34 613 aa17.03■□□□□ 0.32
MECP2-206ENST00000460227 DCAF5Q96JK2 942 aa17.03■□□□□ 0.32
MECP2-206ENST00000460227 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
MECP2-206ENST00000460227 LRRC37A3O60309 1634 aa17.03■□□□□ 0.32
MECP2-206ENST00000460227 NEFMP07197 916 aa17.02■□□□□ 0.32
MECP2-206ENST00000460227 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.32
MECP2-206ENST00000460227 PTF1AQ7RTS3 328 aa17.02■□□□□ 0.32
MECP2-206ENST00000460227 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
MECP2-206ENST00000460227 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
MECP2-206ENST00000460227 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
MECP2-206ENST00000460227 CCDC146Q8IYE0 955 aa17.01■□□□□ 0.31
MECP2-206ENST00000460227 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
MECP2-206ENST00000460227 ERVV-2B6SEH9 535 aa17■□□□□ 0.31
MECP2-206ENST00000460227 NFE2L2Q16236 605 aa17■□□□□ 0.31
MECP2-206ENST00000460227 IL17REQ8NFR9 667 aa17■□□□□ 0.31
MECP2-206ENST00000460227 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
MECP2-206ENST00000460227 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
MECP2-206ENST00000460227 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
MECP2-206ENST00000460227 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
MECP2-206ENST00000460227 TMPOP42166 694 aaKnown RBP16.98■□□□□ 0.31
MECP2-206ENST00000460227 FAM9BQ8IZU0 186 aa16.98■□□□□ 0.31
MECP2-206ENST00000460227 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
MECP2-206ENST00000460227 PIGBQ92521 554 aa16.97■□□□□ 0.31
MECP2-206ENST00000460227 PLSCR1O15162 318 aa16.96■□□□□ 0.31
MECP2-206ENST00000460227 APBA3O96018 575 aa16.96■□□□□ 0.31
MECP2-206ENST00000460227 RIPK4P57078 832 aa16.96■□□□□ 0.31
MECP2-206ENST00000460227 SYTL4Q96C24 671 aaPredicted RBP16.96■□□□□ 0.31
MECP2-206ENST00000460227 PKD1L3Q7Z443 1732 aa16.96■□□□□ 0.3
MECP2-206ENST00000460227 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
MECP2-206ENST00000460227 APAF1O14727 1248 aa16.95■□□□□ 0.3
MECP2-206ENST00000460227 CABP4P57796 275 aa16.95■□□□□ 0.3
MECP2-206ENST00000460227 SF3B2Q13435 895 aaKnown RBP16.95■□□□□ 0.3
MECP2-206ENST00000460227 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
MECP2-206ENST00000460227 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
MECP2-206ENST00000460227 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
MECP2-206ENST00000460227 SLC52A2Q9HAB3 445 aa16.94■□□□□ 0.3
MECP2-206ENST00000460227 DCTN1Q14203 1278 aa16.93■□□□□ 0.3
MECP2-206ENST00000460227 MCM10Q7L590 875 aa16.93■□□□□ 0.3
MECP2-206ENST00000460227 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
MECP2-206ENST00000460227 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
MECP2-206ENST00000460227 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
MECP2-206ENST00000460227 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
MECP2-206ENST00000460227 CEMIPQ8WUJ3 1361 aa16.92■□□□□ 0.3
MECP2-206ENST00000460227 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms