RNA–Protein interactions for RNA: ENST00000460160.5

HOXB3-202, Transcript of homeobox B3, humanhuman

TSL 5 BASIC

Gene HOXB3, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-202ENST00000460160 DDX54Q8TDD1 881 aaKnown RBP32.53■■■□□ 2.8
HOXB3-202ENST00000460160 ACSBG1Q96GR2 724 aa32.53■■■□□ 2.8
HOXB3-202ENST00000460160 WASHC2AQ641Q2 1341 aa32.53■■■□□ 2.8
HOXB3-202ENST00000460160 ZCRB1Q8TBF4 217 aaKnown RBP32.51■■■□□ 2.79
HOXB3-202ENST00000460160 BTAF1O14981 1849 aa32.5■■■□□ 2.79
HOXB3-202ENST00000460160 RAPGEF4Q8WZA2 1011 aa32.49■■■□□ 2.79
HOXB3-202ENST00000460160 KNSTRNQ9Y448 316 aa32.49■■■□□ 2.79
HOXB3-202ENST00000460160 PROM2Q8N271 834 aa32.48■■■□□ 2.79
HOXB3-202ENST00000460160 NCAPD2Q15021 1401 aa32.48■■■□□ 2.79
HOXB3-202ENST00000460160 LRP5O75197 1615 aa32.46■■■□□ 2.79
HOXB3-202ENST00000460160 NBPF14Q5TI25 921 aa32.46■■■□□ 2.79
HOXB3-202ENST00000460160 TATP17735 454 aaPredicted RBP32.45■■■□□ 2.78
HOXB3-202ENST00000460160 DOT1LQ8TEK3 1739 aa32.44■■■□□ 2.78
HOXB3-202ENST00000460160 AMER1Q5JTC6 1135 aaPredicted RBP32.43■■■□□ 2.78
HOXB3-202ENST00000460160 MORC1Q86VD1 984 aa32.43■■■□□ 2.78
HOXB3-202ENST00000460160 TXNRD1Q16881 649 aa32.41■■■□□ 2.78
HOXB3-202ENST00000460160 EYA1Q99502 592 aa32.41■■■□□ 2.78
HOXB3-202ENST00000460160 PKD1L3Q7Z443 1732 aa32.41■■■□□ 2.78
HOXB3-202ENST00000460160 EIF4A2Q14240 407 aaKnown RBP32.4■■■□□ 2.78
HOXB3-202ENST00000460160 ANO8Q9HCE9 1232 aaPredicted RBP32.4■■■□□ 2.78
HOXB3-202ENST00000460160 PER1O15534 1290 aaPredicted RBP32.38■■■□□ 2.77
HOXB3-202ENST00000460160 PCDH11XQ9BZA7 1347 aa32.37■■■□□ 2.77
HOXB3-202ENST00000460160 PCDH11YQ9BZA8 1340 aa32.37■■■□□ 2.77
HOXB3-202ENST00000460160 PRIM1P49642 420 aaKnown RBP32.36■■■□□ 2.77
HOXB3-202ENST00000460160 SYTL4Q96C24 671 aaPredicted RBP32.34■■■□□ 2.77
HOXB3-202ENST00000460160 CYP27B1O15528 508 aa32.32■■■□□ 2.76
HOXB3-202ENST00000460160 IGSF1Q8N6C5 1336 aa32.3■■■□□ 2.76
HOXB3-202ENST00000460160 PAPPAQ13219 1627 aa32.3■■■□□ 2.76
HOXB3-202ENST00000460160 CASZ1Q86V15 1759 aa32.28■■■□□ 2.76
HOXB3-202ENST00000460160 TOGARAM1Q9Y4F4 1720 aa32.28■■■□□ 2.76
HOXB3-202ENST00000460160 LY75O60449 1722 aa32.27■■■□□ 2.76
HOXB3-202ENST00000460160 SPG7Q9UQ90 795 aa32.26■■■□□ 2.76
HOXB3-202ENST00000460160 LRRC4BQ9NT99 713 aa32.26■■■□□ 2.75
HOXB3-202ENST00000460160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.26■■■□□ 2.75
HOXB3-202ENST00000460160 ITGB4P16144 1822 aa32.25■■■□□ 2.75
HOXB3-202ENST00000460160 CC2D1BQ5T0F9 858 aaKnown RBP32.25■■■□□ 2.75
HOXB3-202ENST00000460160 STK32BQ9NY57 414 aa32.25■■■□□ 2.75
HOXB3-202ENST00000460160 SLC15A2Q16348 729 aa32.24■■■□□ 2.75
HOXB3-202ENST00000460160 NPC1L1Q9UHC9 1359 aa32.24■■■□□ 2.75
HOXB3-202ENST00000460160 PLEKHG2Q9H7P9 1386 aa32.23■■■□□ 2.75
HOXB3-202ENST00000460160 PDGFDQ9GZP0 370 aaPredicted RBP32.21■■■□□ 2.75
HOXB3-202ENST00000460160 NKX1-1Q15270 411 aaPredicted RBP32.21■■■□□ 2.75
HOXB3-202ENST00000460160 SLC27A3Q5K4L6 730 aa32.21■■■□□ 2.75
HOXB3-202ENST00000460160 MTHFSP49914 203 aa32.19■■■□□ 2.74
HOXB3-202ENST00000460160 IL13P35225 146 aa32.18■■■□□ 2.74
HOXB3-202ENST00000460160 ZNF827Q17R98 1081 aa32.16■■■□□ 2.74
HOXB3-202ENST00000460160 AEBP1Q8IUX7 1158 aa32.16■■■□□ 2.74
HOXB3-202ENST00000460160 PHKG2P15735 406 aa32.16■■■□□ 2.74
HOXB3-202ENST00000460160 KCNQ4P56696 695 aa32.16■■■□□ 2.74
HOXB3-202ENST00000460160 MPRIPQ6WCQ1 1025 aa32.16■■■□□ 2.74
HOXB3-202ENST00000460160 SPON1Q9HCB6 807 aa32.16■■■□□ 2.74
HOXB3-202ENST00000460160 IFNL2Q8IZJ0 200 aa32.15■■■□□ 2.74
HOXB3-202ENST00000460160 KDRP35968 1356 aa32.13■■■□□ 2.73
HOXB3-202ENST00000460160 CNGB1Q14028 1251 aaPredicted RBP32.13■■■□□ 2.73
HOXB3-202ENST00000460160 AKT1S1Q96B36 256 aa32.12■■■□□ 2.73
HOXB3-202ENST00000460160 SULT6B1Q6IMI4 303 aa32.11■■■□□ 2.73
HOXB3-202ENST00000460160 CCNL1Q9UK58 526 aaPredicted RBP32.11■■■□□ 2.73
HOXB3-202ENST00000460160 TUBGCP6Q96RT7 1819 aa32.11■■■□□ 2.73
HOXB3-202ENST00000460160 QSER1Q2KHR3 1735 aa32.1■■■□□ 2.73
HOXB3-202ENST00000460160 PIGBQ92521 554 aa32.1■■■□□ 2.73
HOXB3-202ENST00000460160 ZBTB7AO95365 584 aa32.09■■■□□ 2.73
HOXB3-202ENST00000460160 PLEKHO1Q53GL0 409 aaPredicted RBP32.09■■■□□ 2.73
HOXB3-202ENST00000460160 PALLDQ8WX93 1383 aa32.09■■■□□ 2.73
HOXB3-202ENST00000460160 AMOTQ4VCS5 1084 aa32.07■■■□□ 2.72
HOXB3-202ENST00000460160 TAF1LQ8IZX4 1826 aa32.07■■■□□ 2.72
HOXB3-202ENST00000460160 C5P01031 1676 aa32.06■■■□□ 2.72
HOXB3-202ENST00000460160 ZNF530Q6P9A1 599 aaPredicted RBP32.05■■■□□ 2.72
HOXB3-202ENST00000460160 COL3A1P02461 1466 aaPredicted RBP32.05■■■□□ 2.72
HOXB3-202ENST00000460160 SMARCC1Q92922 1105 aaPredicted RBP32.04■■■□□ 2.72
HOXB3-202ENST00000460160 TMOD3Q9NYL9 352 aa32.04■■■□□ 2.72
HOXB3-202ENST00000460160 DIAPH1O60610 1272 aaKnown RBP32.03■■■□□ 2.72
HOXB3-202ENST00000460160 ATF5Q9Y2D1 282 aaPredicted RBP32.03■■■□□ 2.72
HOXB3-202ENST00000460160 PTGER2P43116 358 aa32.01■■■□□ 2.72
HOXB3-202ENST00000460160 MTFR1LQ9H019 292 aa32.01■■■□□ 2.72
HOXB3-202ENST00000460160 KDM6AO15550 1401 aaPredicted RBP32.01■■■□□ 2.71
HOXB3-202ENST00000460160 HSP90AB1P08238 724 aaKnown RBP32■■■□□ 2.71
HOXB3-202ENST00000460160 DCAF5Q96JK2 942 aa32■■■□□ 2.71
HOXB3-202ENST00000460160 TFCP2L1Q9NZI6 479 aa32■■■□□ 2.71
HOXB3-202ENST00000460160 PPP1R1BQ9UD71 204 aaPredicted RBP32■■■□□ 2.71
HOXB3-202ENST00000460160 PNPLA7Q6ZV29 1317 aa32■■■□□ 2.71
HOXB3-202ENST00000460160 HMOX1P09601 288 aa31.99■■■□□ 2.71
HOXB3-202ENST00000460160 ERVV-2B6SEH9 535 aa31.98■■■□□ 2.71
HOXB3-202ENST00000460160 ASAP1Q9ULH1 1129 aa31.98■■■□□ 2.71
HOXB3-202ENST00000460160 C1orf141Q5JVX7 400 aa31.96■■■□□ 2.71
HOXB3-202ENST00000460160 SGIP1Q9BQI5 828 aa31.96■■■□□ 2.71
HOXB3-202ENST00000460160 C4BP0C0L5 1744 aa31.94■■■□□ 2.7
HOXB3-202ENST00000460160 ATG3Q9NT62 314 aa31.94■■■□□ 2.7
HOXB3-202ENST00000460160 SCN11AQ9UI33 1791 aa31.94■■■□□ 2.7
HOXB3-202ENST00000460160 LOC102724428A0A0B4J2F2 783 aa31.93■■■□□ 2.7
HOXB3-202ENST00000460160 SIK1P57059 783 aa31.93■■■□□ 2.7
HOXB3-202ENST00000460160 SLC16A10Q8TF71 515 aa31.92■■■□□ 2.7
HOXB3-202ENST00000460160 COL24A1Q17RW2 1714 aa31.92■■■□□ 2.7
HOXB3-202ENST00000460160 HMGB2P26583 209 aaKnown RBP31.9■■■□□ 2.7
HOXB3-202ENST00000460160 VIRMAQ69YN4 1812 aaKnown RBP31.9■■■□□ 2.7
HOXB3-202ENST00000460160 PPP2R1AP30153 589 aa31.9■■■□□ 2.7
HOXB3-202ENST00000460160 CABP4P57796 275 aa31.89■■■□□ 2.7
HOXB3-202ENST00000460160 AKAP4Q5JQC9 854 aa31.89■■■□□ 2.7
HOXB3-202ENST00000460160 UBR3Q6ZT12 1888 aa31.88■■■□□ 2.69
HOXB3-202ENST00000460160 U2SURPO15042 1029 aaKnown RBP31.88■■■□□ 2.69
HOXB3-202ENST00000460160 COL23A1Q86Y22 540 aaPredicted RBP31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms