RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 USHBP1Q8N6Y0 703 aa22.68■■□□□ 1.22
SHANK2-213ENST00000460048 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
SHANK2-213ENST00000460048 DOT1LQ8TEK3 1739 aa22.67■■□□□ 1.22
SHANK2-213ENST00000460048 ZCRB1Q8TBF4 217 aaKnown RBP22.66■■□□□ 1.22
SHANK2-213ENST00000460048 ACSBG1Q96GR2 724 aa22.66■■□□□ 1.22
SHANK2-213ENST00000460048 PPM1GO15355 546 aaPredicted RBP22.65■■□□□ 1.22
SHANK2-213ENST00000460048 PROM2Q8N271 834 aa22.65■■□□□ 1.22
SHANK2-213ENST00000460048 DDX54Q8TDD1 881 aaKnown RBP22.65■■□□□ 1.22
SHANK2-213ENST00000460048 PKD1L3Q7Z443 1732 aa22.65■■□□□ 1.22
SHANK2-213ENST00000460048 NBPF14Q5TI25 921 aa22.64■■□□□ 1.21
SHANK2-213ENST00000460048 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
SHANK2-213ENST00000460048 RAPGEF4Q8WZA2 1011 aa22.63■■□□□ 1.21
SHANK2-213ENST00000460048 KNSTRNQ9Y448 316 aa22.62■■□□□ 1.21
SHANK2-213ENST00000460048 TATP17735 454 aaPredicted RBP22.61■■□□□ 1.21
SHANK2-213ENST00000460048 TXNRD1Q16881 649 aa22.6■■□□□ 1.21
SHANK2-213ENST00000460048 AMER1Q5JTC6 1135 aaPredicted RBP22.59■■□□□ 1.21
SHANK2-213ENST00000460048 EYA1Q99502 592 aa22.59■■□□□ 1.21
SHANK2-213ENST00000460048 PER1O15534 1290 aaPredicted RBP22.58■■□□□ 1.21
SHANK2-213ENST00000460048 MORC1Q86VD1 984 aa22.58■■□□□ 1.21
SHANK2-213ENST00000460048 LY75O60449 1722 aa22.57■■□□□ 1.2
SHANK2-213ENST00000460048 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
SHANK2-213ENST00000460048 ANO8Q9HCE9 1232 aaPredicted RBP22.57■■□□□ 1.2
SHANK2-213ENST00000460048 PAPPAQ13219 1627 aa22.57■■□□□ 1.2
SHANK2-213ENST00000460048 CASZ1Q86V15 1759 aa22.56■■□□□ 1.2
SHANK2-213ENST00000460048 ITGB4P16144 1822 aa22.56■■□□□ 1.2
SHANK2-213ENST00000460048 PCDH11XQ9BZA7 1347 aa22.56■■□□□ 1.2
SHANK2-213ENST00000460048 PCDH11YQ9BZA8 1340 aa22.56■■□□□ 1.2
SHANK2-213ENST00000460048 TOGARAM1Q9Y4F4 1720 aa22.54■■□□□ 1.2
SHANK2-213ENST00000460048 PRIM1P49642 420 aaKnown RBP22.54■■□□□ 1.2
SHANK2-213ENST00000460048 CYP27B1O15528 508 aa22.52■■□□□ 1.2
SHANK2-213ENST00000460048 IGSF1Q8N6C5 1336 aa22.52■■□□□ 1.2
SHANK2-213ENST00000460048 SYTL4Q96C24 671 aaPredicted RBP22.51■■□□□ 1.19
SHANK2-213ENST00000460048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.5■■□□□ 1.193e-9■□□□□ 9.5
SHANK2-213ENST00000460048 PLEKHG2Q9H7P9 1386 aa22.5■■□□□ 1.19
SHANK2-213ENST00000460048 LRRC4BQ9NT99 713 aa22.49■■□□□ 1.19
SHANK2-213ENST00000460048 QSER1Q2KHR3 1735 aa22.48■■□□□ 1.19
SHANK2-213ENST00000460048 SLC15A2Q16348 729 aa22.48■■□□□ 1.19
SHANK2-213ENST00000460048 STK32BQ9NY57 414 aa22.48■■□□□ 1.19
SHANK2-213ENST00000460048 SPG7Q9UQ90 795 aa22.48■■□□□ 1.19
SHANK2-213ENST00000460048 NPC1L1Q9UHC9 1359 aa22.48■■□□□ 1.19
SHANK2-213ENST00000460048 NKX1-1Q15270 411 aaPredicted RBP22.47■■□□□ 1.19
SHANK2-213ENST00000460048 SLC27A3Q5K4L6 730 aa22.46■■□□□ 1.19
SHANK2-213ENST00000460048 TUBGCP6Q96RT7 1819 aa22.45■■□□□ 1.19
SHANK2-213ENST00000460048 CC2D1BQ5T0F9 858 aaKnown RBP22.45■■□□□ 1.18
SHANK2-213ENST00000460048 PDGFDQ9GZP0 370 aaPredicted RBP22.44■■□□□ 1.18
SHANK2-213ENST00000460048 TAF1LQ8IZX4 1826 aa22.43■■□□□ 1.18
SHANK2-213ENST00000460048 IL13P35225 146 aa22.43■■□□□ 1.18
SHANK2-213ENST00000460048 PHKG2P15735 406 aa22.42■■□□□ 1.18
SHANK2-213ENST00000460048 MTHFSP49914 203 aa22.42■■□□□ 1.18
SHANK2-213ENST00000460048 SPON1Q9HCB6 807 aa22.42■■□□□ 1.18
SHANK2-213ENST00000460048 ZNF827Q17R98 1081 aa22.41■■□□□ 1.18
SHANK2-213ENST00000460048 IFNL2Q8IZJ0 200 aa22.41■■□□□ 1.18
SHANK2-213ENST00000460048 AKT1S1Q96B36 256 aa22.41■■□□□ 1.18
SHANK2-213ENST00000460048 KDRP35968 1356 aa22.4■■□□□ 1.18
SHANK2-213ENST00000460048 C5P01031 1676 aa22.4■■□□□ 1.18
SHANK2-213ENST00000460048 MPRIPQ6WCQ1 1025 aa22.4■■□□□ 1.18
SHANK2-213ENST00000460048 KCNQ4P56696 695 aa22.39■■□□□ 1.17
SHANK2-213ENST00000460048 AEBP1Q8IUX7 1158 aa22.39■■□□□ 1.17
SHANK2-213ENST00000460048 SULT6B1Q6IMI4 303 aa22.37■■□□□ 1.17
SHANK2-213ENST00000460048 PIGBQ92521 554 aa22.37■■□□□ 1.17
SHANK2-213ENST00000460048 CCNL1Q9UK58 526 aaPredicted RBP22.37■■□□□ 1.17
SHANK2-213ENST00000460048 PALLDQ8WX93 1383 aa22.37■■□□□ 1.17
SHANK2-213ENST00000460048 AMOTQ4VCS5 1084 aa22.36■■□□□ 1.17
SHANK2-213ENST00000460048 PLEKHO1Q53GL0 409 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-213ENST00000460048 COL24A1Q17RW2 1714 aa22.36■■□□□ 1.17
SHANK2-213ENST00000460048 VIRMAQ69YN4 1812 aaKnown RBP22.36■■□□□ 1.17
SHANK2-213ENST00000460048 COL3A1P02461 1466 aaPredicted RBP22.35■■□□□ 1.17
SHANK2-213ENST00000460048 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
SHANK2-213ENST00000460048 SCN11AQ9UI33 1791 aa22.33■■□□□ 1.17
SHANK2-213ENST00000460048 SMARCC1Q92922 1105 aaPredicted RBP22.33■■□□□ 1.17
SHANK2-213ENST00000460048 HSP90AB1P08238 724 aaKnown RBP22.32■■□□□ 1.16
SHANK2-213ENST00000460048 PTGER2P43116 358 aa22.32■■□□□ 1.16
SHANK2-213ENST00000460048 CNGB1Q14028 1251 aaPredicted RBP22.32■■□□□ 1.16
SHANK2-213ENST00000460048 ZNF530Q6P9A1 599 aaPredicted RBP22.32■■□□□ 1.16
SHANK2-213ENST00000460048 MTFR1LQ9H019 292 aa22.32■■□□□ 1.16
SHANK2-213ENST00000460048 TMOD3Q9NYL9 352 aa22.32■■□□□ 1.16
SHANK2-213ENST00000460048 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
SHANK2-213ENST00000460048 KDM6AO15550 1401 aaPredicted RBP22.31■■□□□ 1.16
SHANK2-213ENST00000460048 DIAPH1O60610 1272 aaKnown RBP22.31■■□□□ 1.16
SHANK2-213ENST00000460048 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
SHANK2-213ENST00000460048 ATF5Q9Y2D1 282 aaPredicted RBP22.31■■□□□ 1.16
SHANK2-213ENST00000460048 C4BP0C0L5 1744 aa22.31■■□□□ 1.16
SHANK2-213ENST00000460048 ERVV-2B6SEH9 535 aa22.3■■□□□ 1.16
SHANK2-213ENST00000460048 SGIP1Q9BQI5 828 aa22.3■■□□□ 1.16
SHANK2-213ENST00000460048 PPP1R1BQ9UD71 204 aaPredicted RBP22.3■■□□□ 1.16
SHANK2-213ENST00000460048 TFCP2L1Q9NZI6 479 aa22.29■■□□□ 1.16
SHANK2-213ENST00000460048 ZNF831Q5JPB2 1677 aa22.29■■□□□ 1.16
SHANK2-213ENST00000460048 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
SHANK2-213ENST00000460048 ASAP1Q9ULH1 1129 aa22.28■■□□□ 1.16
SHANK2-213ENST00000460048 HMOX1P09601 288 aa22.27■■□□□ 1.16
SHANK2-213ENST00000460048 HMGB2P26583 209 aaKnown RBP22.27■■□□□ 1.16
SHANK2-213ENST00000460048 SLC16A10Q8TF71 515 aa22.27■■□□□ 1.16
SHANK2-213ENST00000460048 C1orf141Q5JVX7 400 aa22.26■■□□□ 1.15
SHANK2-213ENST00000460048 ATG3Q9NT62 314 aa22.26■■□□□ 1.15
SHANK2-213ENST00000460048 LOC102724428A0A0B4J2F2 783 aa22.25■■□□□ 1.15
SHANK2-213ENST00000460048 SIK1P57059 783 aa22.25■■□□□ 1.15
SHANK2-213ENST00000460048 ADAMTS7Q9UKP4 1686 aa22.25■■□□□ 1.15
SHANK2-213ENST00000460048 AKAP4Q5JQC9 854 aa22.23■■□□□ 1.15
SHANK2-213ENST00000460048 COL5A3P25940 1745 aaPredicted RBP22.23■■□□□ 1.15
SHANK2-213ENST00000460048 PPP2R1AP30153 589 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms