RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 TOPAZ1Q8N9V7 1692 aa6.54□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 SBNO1A3KN83 1393 aa6.54□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 COL22A1Q8NFW1 1626 aaPredicted RBP6.54□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 FOXO3O43524 673 aa6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 TMC2Q8TDI7 906 aa6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 NUDT16Q96DE0 195 aaKnown RBP6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 HIRIP3Q9BW71 556 aaPredicted RBP6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 CDK19Q9BWU1 502 aa6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 CARD11Q9BXL7 1154 aa6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 USTQ9Y2C2 406 aa6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 POLR3AO14802 1390 aaPredicted RBP6.53□□□□□ -1.36
RNU6ATAC28P-201ENST00000459249 SPATA31A3Q5VYP0 1347 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 EVC2Q86UK5 1308 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 TNS3Q68CZ2 1445 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 LRP6O75581 1613 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PSME1Q06323 249 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 DDX17Q92841 729 aaKnown RBP6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ZNF428Q96B54 188 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PUS7Q96PZ0 661 aaKnown RBP6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 BRD4O60885 1362 aaPredicted RBP6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ATAD2Q6PL18 1390 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 DISP3Q9P2K9 1392 aa6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 RGPD8O14715 1765 aaPredicted RBP6.52□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 TRPM3Q9HCF6 1732 aaPredicted RBP6.51□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 TBC1D12O60347 775 aa6.51□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 KRT28Q7Z3Y7 464 aa6.51□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 BEGAINQ9BUH8 593 aa6.51□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ARHGEF10O15013 1369 aa6.51□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ALS2Q96Q42 1657 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 USP47Q96K76 1375 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 SRPK2P78362 688 aaKnown RBP6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PPP2R2DQ66LE6 453 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PLPP6Q8IY26 295 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 CALR3Q96L12 384 aaKnown RBP6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 TESK2Q96S53 571 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 TMEM106CQ9BVX2 250 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 SNRKQ9NRH2 765 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PPIP5K1Q6PFW1 1433 aa6.5□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 NINLQ9Y2I6 1382 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 RFC5P40937 340 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 DIXDC1Q155Q3 683 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 NGDNQ8NEJ9 315 aaKnown RBP6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PMFBP1Q8TBY8 1022 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 PRM3Q9NNZ6 103 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 POLR3EQ9NVU0 708 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 SSH2Q76I76 1423 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ACEP12821 1306 aa6.49□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 XPCQ01831 940 aaPredicted RBP6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 TUSC1Q2TAM9 212 aa6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 MYSM1Q5VVJ2 828 aa6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 FAM217BQ9NTX9 383 aaPredicted RBP6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 RGS17Q9UGC6 210 aaPredicted RBP6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 USP6P35125 1406 aa6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 CPSF1Q10570 1443 aaKnown RBP6.48□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 KIF3CO14782 793 aa6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 HSP90B1P14625 803 aaKnown RBP6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 CLK2P49760 499 aaKnown RBP6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 MDM2Q00987 491 aaPredicted RBP6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ZNF772Q68DY9 489 aaPredicted RBP6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 ABCA3Q99758 1704 aa6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 CRYBG1Q9Y4K1 1723 aa6.47□□□□□ -1.37
RNU6ATAC28P-201ENST00000459249 NUTM2BA6NNL0 878 aaPredicted RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 NUTM2EB1AL46 878 aaPredicted RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 PRIM1P49642 420 aaKnown RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 CDCA8Q53HL2 280 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 MEX3CQ5U5Q3 659 aaKnown RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 NRKQ7Z2Y5 1582 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 NUTM2AQ8IVF1 878 aaPredicted RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 NPDC1Q9NQX5 325 aaPredicted RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 CABP1Q9NZU7 370 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 MARF1Q9Y4F3 1742 aaKnown RBP6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 AKAP12Q02952 1782 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 CD163L1Q9NR16 1453 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 USP19O94966 1318 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 TTC21AQ8NDW8 1320 aa6.46□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 SLIT2O94813 1529 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 MON2Q7Z3U7 1717 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 CSB-PGBD3P0DP91 1061 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 TMF1P82094 1093 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 CCDC27Q2M243 656 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 MICALL2Q8IY33 904 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 DDX12PQ92771 950 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 GLMNQ92990 594 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 PHOX2BQ99453 314 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 TMEM121BQ9BXQ6 578 aaPredicted RBP6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 GDPD2Q9HCC8 539 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 CDK12Q9NYV4 1490 aaPredicted RBP6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 AFF2P51816 1311 aa6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.45□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 EDC4Q6P2E9 1401 aaKnown RBP6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 ADAMTS2O95450 1211 aa6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 PRKAR2AP13861 404 aaKnown RBP6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 EIF4G2P78344 907 aaKnown RBP eCLIP6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 POTEAQ6S8J7 498 aa6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 ILDR2Q71H61 639 aa6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 SND1Q7KZF4 910 aaKnown RBP eCLIP6.44□□□□□ -1.38
RNU6ATAC28P-201ENST00000459249 MTMR14Q8NCE2 650 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms