RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 SLC34A2O95436 690 aa8.34□□□□□ -1.07
VPS8-214ENST00000458721 MYT1Q01538 1121 aa8.34□□□□□ -1.07
VPS8-214ENST00000458721 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
VPS8-214ENST00000458721 LMOD2Q6P5Q4 547 aa8.34□□□□□ -1.07
VPS8-214ENST00000458721 POLR3AO14802 1390 aaPredicted RBP8.34□□□□□ -1.07
VPS8-214ENST00000458721 BRD4O60885 1362 aaPredicted RBP8.34□□□□□ -1.07
VPS8-214ENST00000458721 WASLO00401 505 aaPredicted RBP8.33□□□□□ -1.08
VPS8-214ENST00000458721 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
VPS8-214ENST00000458721 PRDM11Q9NQV5 511 aa8.33□□□□□ -1.08
VPS8-214ENST00000458721 GPHNQ9NQX3 736 aaPredicted RBP8.33□□□□□ -1.08
VPS8-214ENST00000458721 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
VPS8-214ENST00000458721 CPDO75976 1380 aa8.33□□□□□ -1.08
VPS8-214ENST00000458721 SPATA31A1Q5TZJ5 1347 aa8.32□□□□□ -1.08
VPS8-214ENST00000458721 PRR36Q9H6K5 1346 aa8.32□□□□□ -1.08
VPS8-214ENST00000458721 SSH2Q76I76 1423 aa8.32□□□□□ -1.08
VPS8-214ENST00000458721 FAM196AQ6ZSG2 479 aa8.32□□□□□ -1.08
VPS8-214ENST00000458721 PMFBP1Q8TBY8 1022 aa8.32□□□□□ -1.08
VPS8-214ENST00000458721 QRICH2Q9H0J4 1663 aa8.32□□□□□ -1.08
VPS8-214ENST00000458721 FOXK1P85037 733 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 SAFB2Q14151 953 aaKnown RBP eCLIP8.31□□□□□ -1.08
VPS8-214ENST00000458721 AMER1Q5JTC6 1135 aaPredicted RBP8.31□□□□□ -1.08
VPS8-214ENST00000458721 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 NGDNQ8NEJ9 315 aaKnown RBP8.31□□□□□ -1.08
VPS8-214ENST00000458721 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 KIAA0232Q92628 1395 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 RAB3GAP2Q9H2M9 1393 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 PEAK1Q9H792 1746 aa8.31□□□□□ -1.08
VPS8-214ENST00000458721 LRRC37A3O60309 1634 aa8.3□□□□□ -1.08
VPS8-214ENST00000458721 GTPBP6O43824 516 aaPredicted RBP8.3□□□□□ -1.08
VPS8-214ENST00000458721 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.082e-6■■■□□ 18.6
VPS8-214ENST00000458721 PCDHGA4Q9Y5G9 962 aa8.3□□□□□ -1.08
VPS8-214ENST00000458721 USP19O94966 1318 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
VPS8-214ENST00000458721 ABCC6O95255 1503 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 PSDA5PKW4 1024 aaPredicted RBP8.29□□□□□ -1.08
VPS8-214ENST00000458721 ZNF316A6NFI3 1004 aaPredicted RBP8.29□□□□□ -1.08
VPS8-214ENST00000458721 EN1Q05925 392 aaPredicted RBP8.29□□□□□ -1.08
VPS8-214ENST00000458721 SPNS2Q8IVW8 549 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 PLPP6Q8IY26 295 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 TRAK1Q9UPV9 953 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 THRAP3Q9Y2W1 955 aaKnown RBP8.29□□□□□ -1.08
VPS8-214ENST00000458721 NINLQ9Y2I6 1382 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 COL5A2P05997 1499 aaPredicted RBP8.29□□□□□ -1.08
VPS8-214ENST00000458721 AKAP12Q02952 1782 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 SLIT3O75094 1523 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 OVOS2A0A0G2JMS6 1433 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 OVOS2A0A0J9YW53 1432 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 OVOS2Q6IE36 1432 aa8.29□□□□□ -1.08
VPS8-214ENST00000458721 CAMTA1Q9Y6Y1 1673 aa8.28□□□□□ -1.08
VPS8-214ENST00000458721 CAMKK2Q96RR4 588 aa8.28□□□□□ -1.08
VPS8-214ENST00000458721 HIRIP3Q9BW71 556 aaPredicted RBP8.28□□□□□ -1.08
VPS8-214ENST00000458721 BCL9O00512 1426 aa8.28□□□□□ -1.08
VPS8-214ENST00000458721 CASZ1Q86V15 1759 aa8.27□□□□□ -1.08
VPS8-214ENST00000458721 NUDT7P0C024 238 aa8.27□□□□□ -1.09
VPS8-214ENST00000458721 DSG2Q14126 1118 aa8.27□□□□□ -1.09
VPS8-214ENST00000458721 R3HDM1Q15032 1099 aaKnown RBP8.27□□□□□ -1.09
VPS8-214ENST00000458721 ZNF687Q8N1G0 1237 aa8.27□□□□□ -1.09
VPS8-214ENST00000458721 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
VPS8-214ENST00000458721 CRB1P82279 1406 aa8.27□□□□□ -1.09
VPS8-214ENST00000458721 PLEKHG3A1L390 1219 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 PDE3BQ13370 1112 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 TCP11L2Q8N4U5 519 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 DCAF11Q8TEB1 546 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
VPS8-214ENST00000458721 PIK3C2AO00443 1686 aa8.26□□□□□ -1.09
VPS8-214ENST00000458721 TRPM1Q7Z4N2 1603 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 USP54Q70EL1 1684 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 TRIM37O94972 964 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 MMRN1Q13201 1228 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 EZH2Q15910 746 aaKnown RBP8.25□□□□□ -1.09
VPS8-214ENST00000458721 CRISPLD2Q9H0B8 497 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 ACEP12821 1306 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 COL18A1P39060 1754 aa8.25□□□□□ -1.09
VPS8-214ENST00000458721 AATKQ6ZMQ8 1374 aa8.24□□□□□ -1.09
VPS8-214ENST00000458721 USP6P35125 1406 aa8.24□□□□□ -1.09
VPS8-214ENST00000458721 PPIP5K1Q6PFW1 1433 aa8.24□□□□□ -1.09
VPS8-214ENST00000458721 APBA3O96018 575 aa8.24□□□□□ -1.09
VPS8-214ENST00000458721 NLRP13Q86W25 1043 aa8.24□□□□□ -1.09
VPS8-214ENST00000458721 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
VPS8-214ENST00000458721 TBC1D12O60347 775 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 PDE4AP27815 886 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 EVA1CP58658 441 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 CHRNA2Q15822 529 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 FAM182BQ5T319 152 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 ABTB2Q8N961 1025 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 CDCA7Q9BWT1 371 aaPredicted RBP8.23□□□□□ -1.09
VPS8-214ENST00000458721 CDK19Q9BWU1 502 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 SPON1Q9HCB6 807 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 LHX6Q9UPM6 363 aa8.23□□□□□ -1.09
VPS8-214ENST00000458721 CPSF1Q10570 1443 aaKnown RBP8.22□□□□□ -1.09
VPS8-214ENST00000458721 NHSQ6T4R5 1651 aa8.22□□□□□ -1.09
VPS8-214ENST00000458721 PLSCR1O15162 318 aa8.22□□□□□ -1.09
VPS8-214ENST00000458721 ZC3H6P61129 1189 aaKnown RBP8.22□□□□□ -1.09
VPS8-214ENST00000458721 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
VPS8-214ENST00000458721 RTN4Q9NQC3 1192 aaKnown RBP8.22□□□□□ -1.09
VPS8-214ENST00000458721 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms