RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 DIAPH1O60610 1272 aaKnown RBP16.49■□□□□ 0.23
CNOT3-205ENST00000457463 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
CNOT3-205ENST00000457463 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
CNOT3-205ENST00000457463 KCNQ2O43526 872 aa16.48■□□□□ 0.23
CNOT3-205ENST00000457463 HMOX1P09601 288 aa16.48■□□□□ 0.23
CNOT3-205ENST00000457463 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
CNOT3-205ENST00000457463 RGPD1P0DJD0 1748 aa16.48■□□□□ 0.23
CNOT3-205ENST00000457463 CYP27B1O15528 508 aa16.47■□□□□ 0.23
CNOT3-205ENST00000457463 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
CNOT3-205ENST00000457463 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
CNOT3-205ENST00000457463 EN1Q05925 392 aaPredicted RBP16.45■□□□□ 0.22
CNOT3-205ENST00000457463 RALBP1Q15311 655 aa16.45■□□□□ 0.22
CNOT3-205ENST00000457463 KDRP35968 1356 aa16.45■□□□□ 0.22
CNOT3-205ENST00000457463 BCL9O00512 1426 aa16.45■□□□□ 0.22
CNOT3-205ENST00000457463 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
CNOT3-205ENST00000457463 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
CNOT3-205ENST00000457463 APBA3O96018 575 aa16.43■□□□□ 0.22
CNOT3-205ENST00000457463 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
CNOT3-205ENST00000457463 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
CNOT3-205ENST00000457463 PCDH11XQ9BZA7 1347 aa16.43■□□□□ 0.22
CNOT3-205ENST00000457463 PCDH11YQ9BZA8 1340 aa16.43■□□□□ 0.22
CNOT3-205ENST00000457463 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
CNOT3-205ENST00000457463 BCL11BQ9C0K0 894 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-205ENST00000457463 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
CNOT3-205ENST00000457463 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
CNOT3-205ENST00000457463 SPG7Q9UQ90 795 aa16.41■□□□□ 0.22
CNOT3-205ENST00000457463 PHKG2P15735 406 aa16.4■□□□□ 0.22
CNOT3-205ENST00000457463 BAG6P46379 1132 aa16.4■□□□□ 0.22
CNOT3-205ENST00000457463 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
CNOT3-205ENST00000457463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.4■□□□□ 0.22
CNOT3-205ENST00000457463 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
CNOT3-205ENST00000457463 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-205ENST00000457463 SYTL4Q96C24 671 aaPredicted RBP16.39■□□□□ 0.21
CNOT3-205ENST00000457463 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
CNOT3-205ENST00000457463 U2AF1L5P0DN76 240 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-205ENST00000457463 U2AF1Q01081 240 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNOT3-205ENST00000457463 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
CNOT3-205ENST00000457463 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
CNOT3-205ENST00000457463 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
CNOT3-205ENST00000457463 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
CNOT3-205ENST00000457463 MTHFSDQ2M296 383 aaKnown RBP16.37■□□□□ 0.21
CNOT3-205ENST00000457463 ZNF530Q6P9A1 599 aaPredicted RBP16.37■□□□□ 0.21
CNOT3-205ENST00000457463 NUDCQ9Y266 331 aa16.37■□□□□ 0.21
CNOT3-205ENST00000457463 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
CNOT3-205ENST00000457463 PRKAR2BP31323 418 aa16.36■□□□□ 0.21
CNOT3-205ENST00000457463 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
CNOT3-205ENST00000457463 PROM2Q8N271 834 aa16.36■□□□□ 0.21
CNOT3-205ENST00000457463 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
CNOT3-205ENST00000457463 TOGARAM1Q9Y4F4 1720 aa16.36■□□□□ 0.21
CNOT3-205ENST00000457463 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
CNOT3-205ENST00000457463 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
CNOT3-205ENST00000457463 PLEKHG2Q9H7P9 1386 aa16.34■□□□□ 0.21
CNOT3-205ENST00000457463 KDM6AO15550 1401 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-205ENST00000457463 PLSCR1O15162 318 aa16.33■□□□□ 0.2
CNOT3-205ENST00000457463 BTAF1O14981 1849 aa16.32■□□□□ 0.2
CNOT3-205ENST00000457463 PIGBQ92521 554 aa16.32■□□□□ 0.2
CNOT3-205ENST00000457463 LGR6Q9HBX8 967 aa16.32■□□□□ 0.2
CNOT3-205ENST00000457463 KAT6BQ8WYB5 2073 aa16.31■□□□□ 0.2
CNOT3-205ENST00000457463 FCHSD2O94868 740 aa16.31■□□□□ 0.2
CNOT3-205ENST00000457463 KCNQ4P56696 695 aa16.31■□□□□ 0.2
CNOT3-205ENST00000457463 TXNRD1Q16881 649 aa16.31■□□□□ 0.2
CNOT3-205ENST00000457463 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
CNOT3-205ENST00000457463 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
CNOT3-205ENST00000457463 DCAF5Q96JK2 942 aa16.3■□□□□ 0.2
CNOT3-205ENST00000457463 ANP32CO43423 234 aa16.29■□□□□ 0.2
CNOT3-205ENST00000457463 PLEKHF1Q96S99 279 aa16.29■□□□□ 0.2
CNOT3-205ENST00000457463 LRRC4BQ9NT99 713 aa16.29■□□□□ 0.2
CNOT3-205ENST00000457463 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
CNOT3-205ENST00000457463 TMOD3Q9NYL9 352 aa16.28■□□□□ 0.2
CNOT3-205ENST00000457463 RREB1Q92766 1687 aa16.27■□□□□ 0.2
CNOT3-205ENST00000457463 ITGB4P16144 1822 aa16.27■□□□□ 0.2
CNOT3-205ENST00000457463 RNMTO43148 476 aaKnown RBP16.27■□□□□ 0.2
CNOT3-205ENST00000457463 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.2
CNOT3-205ENST00000457463 ASAP1Q9ULH1 1129 aa16.27■□□□□ 0.2
CNOT3-205ENST00000457463 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
CNOT3-205ENST00000457463 ERVV-2B6SEH9 535 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 CABP4P57796 275 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 IL17REQ8NFR9 667 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
CNOT3-205ENST00000457463 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
CNOT3-205ENST00000457463 ATG3Q9NT62 314 aa16.25■□□□□ 0.19
CNOT3-205ENST00000457463 PALLDQ8WX93 1383 aa16.25■□□□□ 0.19
CNOT3-205ENST00000457463 MAP3K5Q99683 1374 aa16.25■□□□□ 0.19
CNOT3-205ENST00000457463 RGPD3A6NKT7 1758 aaPredicted RBP16.24■□□□□ 0.19
CNOT3-205ENST00000457463 RGPD4Q7Z3J3 1758 aa16.24■□□□□ 0.19
CNOT3-205ENST00000457463 GNAT3A8MTJ3 354 aa16.24■□□□□ 0.19
CNOT3-205ENST00000457463 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
CNOT3-205ENST00000457463 R3HDM1Q15032 1099 aaKnown RBP16.24■□□□□ 0.19
CNOT3-205ENST00000457463 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNOT3-205ENST00000457463 ZNF827Q17R98 1081 aa16.22■□□□□ 0.19
CNOT3-205ENST00000457463 MCM10Q7L590 875 aa16.22■□□□□ 0.19
CNOT3-205ENST00000457463 SLC4A9Q96Q91 983 aa16.22■□□□□ 0.19
CNOT3-205ENST00000457463 SLC52A2Q9HAB3 445 aa16.22■□□□□ 0.19
CNOT3-205ENST00000457463 CCNL1Q9UK58 526 aaPredicted RBP16.22■□□□□ 0.19
CNOT3-205ENST00000457463 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
CNOT3-205ENST00000457463 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
CNOT3-205ENST00000457463 SLC39A6Q13433 755 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms