RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
COMMD3-204ENST00000456711 IRF7Q92985 503 aa10.64□□□□□ -0.71
COMMD3-204ENST00000456711 INO80Q9ULG1 1556 aaPredicted RBP10.64□□□□□ -0.71
COMMD3-204ENST00000456711 AFF2P51816 1311 aa10.63□□□□□ -0.71
COMMD3-204ENST00000456711 SCAF11Q99590 1463 aaKnown RBP10.62□□□□□ -0.71
COMMD3-204ENST00000456711 SLAIN2Q9P270 581 aa10.62□□□□□ -0.71
COMMD3-204ENST00000456711 ADGBQ8N7X0 1667 aa10.62□□□□□ -0.71
COMMD3-204ENST00000456711 YY1P25490 414 aa10.61□□□□□ -0.71
COMMD3-204ENST00000456711 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
COMMD3-204ENST00000456711 CCDC125Q86Z20 511 aa10.61□□□□□ -0.71
COMMD3-204ENST00000456711 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
COMMD3-204ENST00000456711 QTRT2Q9H974 415 aaKnown RBP10.61□□□□□ -0.71
COMMD3-204ENST00000456711 SYCP2Q9BX26 1530 aa10.6□□□□□ -0.71
COMMD3-204ENST00000456711 H3BM21 787 aa10.6□□□□□ -0.71
COMMD3-204ENST00000456711 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
COMMD3-204ENST00000456711 ATP1B4Q9UN42 357 aaPredicted RBP10.6□□□□□ -0.71
COMMD3-204ENST00000456711 CDC42BPAQ5VT25 1732 aa10.59□□□□□ -0.71
COMMD3-204ENST00000456711 NUTM2FA1L443 756 aa10.59□□□□□ -0.71
COMMD3-204ENST00000456711 BMP1P13497 986 aa10.59□□□□□ -0.71
COMMD3-204ENST00000456711 FECHP22830 423 aa10.59□□□□□ -0.71
COMMD3-204ENST00000456711 TIAM1Q13009 1591 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 MSH6P52701 1360 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 ATP6V1AP38606 617 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 HNRNPMP52272 730 aaKnown RBP eCLIP10.58□□□□□ -0.72
COMMD3-204ENST00000456711 RSPH4AQ5TD94 716 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 TRIM46Q7Z4K8 759 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 PROSER2Q86WR7 435 aaPredicted RBP10.58□□□□□ -0.72
COMMD3-204ENST00000456711 KCTD17Q8N5Z5 321 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
COMMD3-204ENST00000456711 LTKP29376 864 aa10.57□□□□□ -0.72
COMMD3-204ENST00000456711 MSS51Q4VC12 460 aa10.57□□□□□ -0.72
COMMD3-204ENST00000456711 NPAS3Q8IXF0 933 aa10.57□□□□□ -0.72
COMMD3-204ENST00000456711 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
COMMD3-204ENST00000456711 PRDM15P57071 1507 aaPredicted RBP10.57□□□□□ -0.72
COMMD3-204ENST00000456711 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 UBR1Q8IWV7 1749 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 AHDC1Q5TGY3 1603 aaPredicted RBP10.56□□□□□ -0.72
COMMD3-204ENST00000456711 KCNA6P17658 529 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 GSK3AP49840 483 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 TXNDC2Q86VQ3 553 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 ZNF777Q9ULD5 760 aaPredicted RBP10.56□□□□□ -0.72
COMMD3-204ENST00000456711 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
COMMD3-204ENST00000456711 ABCC3O15438 1527 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
COMMD3-204ENST00000456711 ARHGAP23Q9P227 1491 aa10.55□□□□□ -0.72
COMMD3-204ENST00000456711 EP400Q96L91 3159 aa10.55□□□□□ -0.72
COMMD3-204ENST00000456711 NHSL1Q5SYE7 1610 aa10.55□□□□□ -0.72
COMMD3-204ENST00000456711 SLIT1O75093 1534 aa10.55□□□□□ -0.72
COMMD3-204ENST00000456711 METTL3Q86U44 580 aaKnown RBP10.55□□□□□ -0.72
COMMD3-204ENST00000456711 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
COMMD3-204ENST00000456711 OATP04181 439 aa10.54□□□□□ -0.72
COMMD3-204ENST00000456711 SKOR1P84550 965 aa10.54□□□□□ -0.72
COMMD3-204ENST00000456711 DIP2AQ14689 1571 aa10.54□□□□□ -0.72
COMMD3-204ENST00000456711 KIAA1107Q9UPP5 1409 aa10.53□□□□□ -0.72
COMMD3-204ENST00000456711 RC3H1Q5TC82 1133 aaKnown RBP10.53□□□□□ -0.72
COMMD3-204ENST00000456711 C8orf37Q96NL8 207 aa10.53□□□□□ -0.72
COMMD3-204ENST00000456711 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
COMMD3-204ENST00000456711 NKTRP30414 1462 aaKnown RBP10.53□□□□□ -0.72
COMMD3-204ENST00000456711 NCOA2Q15596 1464 aa10.53□□□□□ -0.72
COMMD3-204ENST00000456711 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
COMMD3-204ENST00000456711 DHX29Q7Z478 1369 aaKnown RBP10.52□□□□□ -0.72
COMMD3-204ENST00000456711 FMN1Q68DA7 1419 aa10.52□□□□□ -0.73
COMMD3-204ENST00000456711 KIF3BO15066 747 aa10.52□□□□□ -0.73
COMMD3-204ENST00000456711 KDM5AP29375 1690 aaKnown RBP10.52□□□□□ -0.73
COMMD3-204ENST00000456711 PLEKHH2Q8IVE3 1493 aa10.51□□□□□ -0.73
COMMD3-204ENST00000456711 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
COMMD3-204ENST00000456711 FCHSD2O94868 740 aa10.51□□□□□ -0.73
COMMD3-204ENST00000456711 ALDH1A1P00352 501 aa10.51□□□□□ -0.73
COMMD3-204ENST00000456711 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
COMMD3-204ENST00000456711 EID1Q9Y6B2 187 aa10.51□□□□□ -0.73
COMMD3-204ENST00000456711 SENP3-EIF4A1A0A087X0R7 540 aa10.5□□□□□ -0.73
COMMD3-204ENST00000456711 GCGRP47871 477 aa10.5□□□□□ -0.73
COMMD3-204ENST00000456711 MMP16P51512 607 aa10.5□□□□□ -0.73
COMMD3-204ENST00000456711 HRCP23327 699 aa10.49□□□□□ -0.73
COMMD3-204ENST00000456711 KCNMA1Q12791 1236 aa10.49□□□□□ -0.73
COMMD3-204ENST00000456711 ERVK-7P63135 1459 aa10.49□□□□□ -0.73
COMMD3-204ENST00000456711 DAXXQ9UER7 740 aaPredicted RBP10.48□□□□□ -0.73
COMMD3-204ENST00000456711 BLMP54132 1417 aaPredicted RBP10.48□□□□□ -0.73
COMMD3-204ENST00000456711 RTEL1-TNFRSF6BF6WH68 1400 aa10.47□□□□□ -0.73
COMMD3-204ENST00000456711 GPATCH8Q9UKJ3 1502 aaKnown RBP10.47□□□□□ -0.73
COMMD3-204ENST00000456711 DEFB132Q7Z7B7 95 aa10.46□□□□□ -0.73
COMMD3-204ENST00000456711 BCL9LQ86UU0 1499 aa10.46□□□□□ -0.74
COMMD3-204ENST00000456711 TET3O43151 1660 aa10.46□□□□□ -0.74
COMMD3-204ENST00000456711 SETD5Q9C0A6 1442 aa10.45□□□□□ -0.74
COMMD3-204ENST00000456711 CAPN5O15484 640 aaPredicted RBP10.45□□□□□ -0.74
COMMD3-204ENST00000456711 SLC26A8Q96RN1 970 aa10.45□□□□□ -0.74
COMMD3-204ENST00000456711 TRPC5Q9UL62 973 aaPredicted RBP10.45□□□□□ -0.74
COMMD3-204ENST00000456711 TMEM2Q9UHN6 1383 aa10.44□□□□□ -0.74
COMMD3-204ENST00000456711 ARHGEF1Q92888 912 aaKnown RBP10.44□□□□□ -0.74
COMMD3-204ENST00000456711 DXOO77932 396 aaKnown RBP10.43□□□□□ -0.74
COMMD3-204ENST00000456711 WNT7BP56706 349 aa10.43□□□□□ -0.74
COMMD3-204ENST00000456711 CCDC24Q8N4L8 307 aa10.43□□□□□ -0.74
COMMD3-204ENST00000456711 ZFP42Q96MM3 310 aa10.43□□□□□ -0.74
COMMD3-204ENST00000456711 USP21Q9UK80 565 aa10.43□□□□□ -0.74
COMMD3-204ENST00000456711 MAST1Q9Y2H9 1570 aa10.43□□□□□ -0.74
COMMD3-204ENST00000456711 CAMSAP2Q08AD1 1489 aa10.42□□□□□ -0.74
COMMD3-204ENST00000456711 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
COMMD3-204ENST00000456711 SIAH2O43255 324 aa10.42□□□□□ -0.74
COMMD3-204ENST00000456711 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
COMMD3-204ENST00000456711 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms