RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 NSD2O96028 1365 aa17.43■□□□□ 0.38
TRA2B-206ENST00000456380 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
TRA2B-206ENST00000456380 NBPF6Q5VWK0 638 aa17.42■□□□□ 0.38
TRA2B-206ENST00000456380 NBPF4Q96M43 638 aa17.42■□□□□ 0.38
TRA2B-206ENST00000456380 TFCP2L1Q9NZI6 479 aa17.42■□□□□ 0.38
TRA2B-206ENST00000456380 MEGF6O75095 1541 aa17.42■□□□□ 0.38
TRA2B-206ENST00000456380 FYB1O15117 783 aa17.42■□□□□ 0.38
TRA2B-206ENST00000456380 GGNBP2Q9H3C7 697 aa17.41■□□□□ 0.38
TRA2B-206ENST00000456380 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.37
TRA2B-206ENST00000456380 RTL1A6NKG5 1358 aa17.39■□□□□ 0.37
TRA2B-206ENST00000456380 RGPD2P0DJD1 1756 aa17.39■□□□□ 0.37
TRA2B-206ENST00000456380 POLD1P28340 1107 aa17.39■□□□□ 0.37
TRA2B-206ENST00000456380 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
TRA2B-206ENST00000456380 TMF1P82094 1093 aa17.38■□□□□ 0.37
TRA2B-206ENST00000456380 GPR162Q16538 588 aa17.38■□□□□ 0.37
TRA2B-206ENST00000456380 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
TRA2B-206ENST00000456380 CCNL1Q9UK58 526 aaPredicted RBP17.38■□□□□ 0.37
TRA2B-206ENST00000456380 DOT1LQ8TEK3 1739 aa17.37■□□□□ 0.37
TRA2B-206ENST00000456380 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
TRA2B-206ENST00000456380 QSER1Q2KHR3 1735 aa17.37■□□□□ 0.37
TRA2B-206ENST00000456380 CGNL1Q0VF96 1302 aa17.37■□□□□ 0.37
TRA2B-206ENST00000456380 HSP90AB2PQ58FF8 381 aa17.36■□□□□ 0.37
TRA2B-206ENST00000456380 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
TRA2B-206ENST00000456380 CHD4Q14839 1912 aa17.35■□□□□ 0.37
TRA2B-206ENST00000456380 CEP350Q5VT06 3117 aa17.35■□□□□ 0.37
TRA2B-206ENST00000456380 LY75O60449 1722 aa17.35■□□□□ 0.37
TRA2B-206ENST00000456380 USP47Q96K76 1375 aa17.35■□□□□ 0.37
TRA2B-206ENST00000456380 NLGN2Q8NFZ4 835 aa17.35■□□□□ 0.37
TRA2B-206ENST00000456380 COL24A1Q17RW2 1714 aa17.35■□□□□ 0.37
TRA2B-206ENST00000456380 TUBGCP6Q96RT7 1819 aa17.34■□□□□ 0.37
TRA2B-206ENST00000456380 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
TRA2B-206ENST00000456380 COL23A1Q86Y22 540 aaPredicted RBP17.34■□□□□ 0.37
TRA2B-206ENST00000456380 INSRP06213 1382 aa17.34■□□□□ 0.37
TRA2B-206ENST00000456380 SMG6Q86US8 1419 aaKnown RBP17.33■□□□□ 0.37
TRA2B-206ENST00000456380 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
TRA2B-206ENST00000456380 MSH5O43196 834 aa17.32■□□□□ 0.36
TRA2B-206ENST00000456380 CARD14Q9BXL6 1004 aa17.32■□□□□ 0.36
TRA2B-206ENST00000456380 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
TRA2B-206ENST00000456380 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
TRA2B-206ENST00000456380 FLT4P35916 1363 aa17.31■□□□□ 0.36
TRA2B-206ENST00000456380 CYP27B1O15528 508 aa17.3■□□□□ 0.36
TRA2B-206ENST00000456380 C1QTNF8P60827 252 aa17.3■□□□□ 0.36
TRA2B-206ENST00000456380 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
TRA2B-206ENST00000456380 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
TRA2B-206ENST00000456380 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
TRA2B-206ENST00000456380 KIF24Q5T7B8 1368 aa17.29■□□□□ 0.36
TRA2B-206ENST00000456380 EMILIN1Q9Y6C2 1016 aa17.29■□□□□ 0.36
TRA2B-206ENST00000456380 YBX3P16989 372 aaKnown RBP eCLIP17.28■□□□□ 0.363e-7■■□□□ 12.8
TRA2B-206ENST00000456380 PALLDQ8WX93 1383 aa17.28■□□□□ 0.36
TRA2B-206ENST00000456380 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
TRA2B-206ENST00000456380 NSD3Q9BZ95 1437 aa17.25■□□□□ 0.35
TRA2B-206ENST00000456380 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
TRA2B-206ENST00000456380 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
TRA2B-206ENST00000456380 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
TRA2B-206ENST00000456380 PIGBQ92521 554 aa17.24■□□□□ 0.35
TRA2B-206ENST00000456380 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
TRA2B-206ENST00000456380 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
TRA2B-206ENST00000456380 HMGB2P26583 209 aaKnown RBP17.23■□□□□ 0.35
TRA2B-206ENST00000456380 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
TRA2B-206ENST00000456380 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
TRA2B-206ENST00000456380 C5P01031 1676 aa17.23■□□□□ 0.35
TRA2B-206ENST00000456380 NCAPD2Q15021 1401 aa17.23■□□□□ 0.35
TRA2B-206ENST00000456380 SMIM5Q71RC9 77 aa17.23■□□□□ 0.35
TRA2B-206ENST00000456380 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
TRA2B-206ENST00000456380 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
TRA2B-206ENST00000456380 CD2APQ9Y5K6 639 aa17.22■□□□□ 0.35
TRA2B-206ENST00000456380 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
TRA2B-206ENST00000456380 AK7Q96M32 723 aa17.21■□□□□ 0.35
TRA2B-206ENST00000456380 EYA1Q99502 592 aa17.21■□□□□ 0.35
TRA2B-206ENST00000456380 SPG7Q9UQ90 795 aa17.21■□□□□ 0.35
TRA2B-206ENST00000456380 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
TRA2B-206ENST00000456380 TAF1LQ8IZX4 1826 aa17.2■□□□□ 0.34
TRA2B-206ENST00000456380 PKD1L3Q7Z443 1732 aa17.19■□□□□ 0.34
TRA2B-206ENST00000456380 C4BP0C0L5 1744 aa17.19■□□□□ 0.34
TRA2B-206ENST00000456380 PHF14O94880 888 aa17.19■□□□□ 0.34
TRA2B-206ENST00000456380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.19■□□□□ 0.341e-7■■□□□ 12.1
TRA2B-206ENST00000456380 POLKQ9UBT6 870 aa17.19■□□□□ 0.34
TRA2B-206ENST00000456380 ITGB4P16144 1822 aa17.19■□□□□ 0.34
TRA2B-206ENST00000456380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
TRA2B-206ENST00000456380 LOC102724428A0A0B4J2F2 783 aa17.18■□□□□ 0.34
TRA2B-206ENST00000456380 SIK1P57059 783 aa17.18■□□□□ 0.34
TRA2B-206ENST00000456380 LINC00116Q8NCU8 138 aa17.18■□□□□ 0.34
TRA2B-206ENST00000456380 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
TRA2B-206ENST00000456380 PHKG2P15735 406 aa17.16■□□□□ 0.34
TRA2B-206ENST00000456380 SSFA2P28290 1259 aa17.16■□□□□ 0.34
TRA2B-206ENST00000456380 ITPK1Q13572 414 aa17.16■□□□□ 0.34
TRA2B-206ENST00000456380 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
TRA2B-206ENST00000456380 IFNL2Q8IZJ0 200 aa17.15■□□□□ 0.34
TRA2B-206ENST00000456380 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
TRA2B-206ENST00000456380 ANKRD26Q9UPS8 1709 aa17.15■□□□□ 0.34
TRA2B-206ENST00000456380 MAP2P11137 1827 aaKnown RBP17.15■□□□□ 0.34
TRA2B-206ENST00000456380 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
TRA2B-206ENST00000456380 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
TRA2B-206ENST00000456380 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
TRA2B-206ENST00000456380 TNNT2P45379 298 aaPredicted RBP17.13■□□□□ 0.33
TRA2B-206ENST00000456380 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
TRA2B-206ENST00000456380 ATP6V1AP38606 617 aa17.13■□□□□ 0.33
TRA2B-206ENST00000456380 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
TRA2B-206ENST00000456380 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
TRA2B-206ENST00000456380 GNPATO15228 680 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms