RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 LTN1O94822 1766 aa11.24□□□□□ -0.61
RPE-216ENST00000454822 KIAA0232Q92628 1395 aa11.24□□□□□ -0.61
RPE-216ENST00000454822 GCP02774 474 aa11.24□□□□□ -0.61
RPE-216ENST00000454822 HSPA2P54652 639 aa11.24□□□□□ -0.61
RPE-216ENST00000454822 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
RPE-216ENST00000454822 PDZRN3Q9UPQ7 1066 aa11.24□□□□□ -0.61
RPE-216ENST00000454822 ZBTB7CA1YPR0 619 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 GNAT3A8MTJ3 354 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 ATF3P18847 181 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 HAP1P54257 671 aaPredicted RBP11.23□□□□□ -0.61
RPE-216ENST00000454822 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 TMEM94Q12767 1356 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 ZBTB7BO15156 539 aaPredicted RBP11.23□□□□□ -0.61
RPE-216ENST00000454822 NBPF6Q5VWK0 638 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 NPM2Q86SE8 214 aaKnown RBP11.23□□□□□ -0.61
RPE-216ENST00000454822 ARHGEF25Q86VW2 580 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 NBPF4Q96M43 638 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 IPO9Q96P70 1041 aaKnown RBP11.23□□□□□ -0.61
RPE-216ENST00000454822 API5Q9BZZ5 524 aaKnown RBP11.23□□□□□ -0.61
RPE-216ENST00000454822 TSPYL4Q9UJ04 414 aa11.23□□□□□ -0.61
RPE-216ENST00000454822 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
RPE-216ENST00000454822 ABCC4O15439 1325 aa11.22□□□□□ -0.61
RPE-216ENST00000454822 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
RPE-216ENST00000454822 CHMP4BQ9H444 224 aaKnown RBP11.21□□□□□ -0.61
RPE-216ENST00000454822 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
RPE-216ENST00000454822 NCOA3Q9Y6Q9 1424 aa11.21□□□□□ -0.62
RPE-216ENST00000454822 USP19O94966 1318 aa11.21□□□□□ -0.62
RPE-216ENST00000454822 TRPM3Q9HCF6 1732 aaPredicted RBP11.2□□□□□ -0.62
RPE-216ENST00000454822 ANP32EQ9BTT0 268 aa11.2□□□□□ -0.62
RPE-216ENST00000454822 SLIT3O75094 1523 aa11.2□□□□□ -0.62
RPE-216ENST00000454822 MSH6P52701 1360 aa11.2□□□□□ -0.62
RPE-216ENST00000454822 MAP3K5Q99683 1374 aa11.2□□□□□ -0.62
RPE-216ENST00000454822 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
RPE-216ENST00000454822 MST1RQ04912 1400 aa11.2□□□□□ -0.62
RPE-216ENST00000454822 LRRC59Q96AG4 307 aaKnown RBP11.2□□□□□ -0.62
RPE-216ENST00000454822 PHRF1Q9P1Y6 1649 aaKnown RBP11.19□□□□□ -0.62
RPE-216ENST00000454822 SMC5Q8IY18 1101 aa11.19□□□□□ -0.62
RPE-216ENST00000454822 TAF7Q15545 349 aaPredicted RBP11.18□□□□□ -0.62
RPE-216ENST00000454822 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
RPE-216ENST00000454822 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
RPE-216ENST00000454822 DCCP43146 1447 aa11.18□□□□□ -0.62
RPE-216ENST00000454822 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
RPE-216ENST00000454822 DDX17Q92841 729 aaKnown RBP11.18□□□□□ -0.62
RPE-216ENST00000454822 BABAM1Q9NWV8 329 aa11.18□□□□□ -0.62
RPE-216ENST00000454822 NOP58Q9Y2X3 529 aaKnown RBP11.18□□□□□ -0.62
RPE-216ENST00000454822 INTS3Q68E01 1043 aaKnown RBP11.17□□□□□ -0.62
RPE-216ENST00000454822 ANKRD24Q8TF21 1146 aa11.17□□□□□ -0.62
RPE-216ENST00000454822 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
RPE-216ENST00000454822 RGPD2P0DJD1 1756 aa11.17□□□□□ -0.62
RPE-216ENST00000454822 PTPRCP08575 1304 aa11.17□□□□□ -0.62
RPE-216ENST00000454822 C1orf115Q9H7X2 142 aa11.17□□□□□ -0.62
RPE-216ENST00000454822 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
RPE-216ENST00000454822 LRRC37A3O60309 1634 aa11.16□□□□□ -0.62
RPE-216ENST00000454822 ZC3H6P61129 1189 aaKnown RBP11.16□□□□□ -0.62
RPE-216ENST00000454822 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
RPE-216ENST00000454822 RGS12O14924 1447 aa11.16□□□□□ -0.62
RPE-216ENST00000454822 LGR6Q9HBX8 967 aa11.15□□□□□ -0.62
RPE-216ENST00000454822 ALS2Q96Q42 1657 aa11.15□□□□□ -0.62
RPE-216ENST00000454822 G2E3Q7L622 706 aa11.15□□□□□ -0.62
RPE-216ENST00000454822 SIRT2Q8IXJ6 389 aa11.15□□□□□ -0.62
RPE-216ENST00000454822 NCAPD2Q15021 1401 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 CEMIPQ8WUJ3 1361 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 NPHP3Q7Z494 1330 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 NUCB1Q02818 461 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 AMOTQ4VCS5 1084 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 AKAP4Q5JQC9 854 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 ZNF530Q6P9A1 599 aaPredicted RBP11.14□□□□□ -0.63
RPE-216ENST00000454822 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
RPE-216ENST00000454822 SOS1Q07889 1333 aaPredicted RBP11.14□□□□□ -0.63
RPE-216ENST00000454822 CCDC30Q5VVM6 783 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 STK31Q9BXU1 1019 aa11.14□□□□□ -0.63
RPE-216ENST00000454822 SEC24BO95487 1268 aa11.13□□□□□ -0.63
RPE-216ENST00000454822 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
RPE-216ENST00000454822 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 CHD1LQ86WJ1 897 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 NECTIN2Q92692 538 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 DDRGK1Q96HY6 314 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 STRCQ7RTU9 1775 aa11.12□□□□□ -0.63
RPE-216ENST00000454822 ERBB3P21860 1342 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 ANKRD45Q5TZF3 282 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 LNPKQ9C0E8 428 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 SPATA31A3Q5VYP0 1347 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 VIRMAQ69YN4 1812 aaKnown RBP11.11□□□□□ -0.63
RPE-216ENST00000454822 XIRP1Q702N8 1843 aaKnown RBP11.11□□□□□ -0.63
RPE-216ENST00000454822 F6X3S4 739 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 RNMTO43148 476 aaKnown RBP11.11□□□□□ -0.63
RPE-216ENST00000454822 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
RPE-216ENST00000454822 TEFQ10587 303 aa11.11□□□□□ -0.63
RPE-216ENST00000454822 TNS3Q68CZ2 1445 aa11.1□□□□□ -0.63
RPE-216ENST00000454822 CCT4P50991 539 aaKnown RBP11.1□□□□□ -0.63
RPE-216ENST00000454822 FLIIQ13045 1269 aa11.1□□□□□ -0.63
RPE-216ENST00000454822 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
RPE-216ENST00000454822 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
RPE-216ENST00000454822 PXDNQ92626 1479 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms