RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 ITGB4P16144 1822 aa24.17■■□□□ 1.46
UBE2F-218ENST00000454786 SLC27A3Q5K4L6 730 aa24.16■■□□□ 1.46
UBE2F-218ENST00000454786 SMG6Q86US8 1419 aaKnown RBP24.16■■□□□ 1.46
UBE2F-218ENST00000454786 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
UBE2F-218ENST00000454786 ARXQ96QS3 562 aa24.15■■□□□ 1.46
UBE2F-218ENST00000454786 ANKRD26Q9UPS8 1709 aa24.14■■□□□ 1.45
UBE2F-218ENST00000454786 NSD2O96028 1365 aa24.14■■□□□ 1.45
UBE2F-218ENST00000454786 PKD1L3Q7Z443 1732 aa24.13■■□□□ 1.45
UBE2F-218ENST00000454786 AKT1S1Q96B36 256 aa24.13■■□□□ 1.45
UBE2F-218ENST00000454786 SYTL4Q96C24 671 aaPredicted RBP24.13■■□□□ 1.45
UBE2F-218ENST00000454786 USP47Q96K76 1375 aa24.13■■□□□ 1.45
UBE2F-218ENST00000454786 FBLN1P23142 703 aa24.12■■□□□ 1.45
UBE2F-218ENST00000454786 TOGARAM1Q9Y4F4 1720 aa24.11■■□□□ 1.45
UBE2F-218ENST00000454786 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
UBE2F-218ENST00000454786 TMF1P82094 1093 aa24.1■■□□□ 1.45
UBE2F-218ENST00000454786 ZCRB1Q8TBF4 217 aaKnown RBP24.1■■□□□ 1.45
UBE2F-218ENST00000454786 PRIM1P49642 420 aaKnown RBP24.09■■□□□ 1.45
UBE2F-218ENST00000454786 RRS1Q15050 365 aaKnown RBP24.09■■□□□ 1.45
UBE2F-218ENST00000454786 SLC16A10Q8TF71 515 aa24.09■■□□□ 1.45
UBE2F-218ENST00000454786 PNPLA7Q6ZV29 1317 aa24.09■■□□□ 1.45
UBE2F-218ENST00000454786 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.44
UBE2F-218ENST00000454786 GGNBP2Q9H3C7 697 aa24.07■■□□□ 1.44
UBE2F-218ENST00000454786 FYB1O15117 783 aa24.06■■□□□ 1.44
UBE2F-218ENST00000454786 POLD1P28340 1107 aa24.06■■□□□ 1.44
UBE2F-218ENST00000454786 TFCP2L1Q9NZI6 479 aa24.06■■□□□ 1.44
UBE2F-218ENST00000454786 GOLGB1Q14789 3259 aaKnown RBP24.06■■□□□ 1.44
UBE2F-218ENST00000454786 NBPF6Q5VWK0 638 aa24.05■■□□□ 1.44
UBE2F-218ENST00000454786 NBPF4Q96M43 638 aa24.05■■□□□ 1.44
UBE2F-218ENST00000454786 INSRP06213 1382 aa24.04■■□□□ 1.44
UBE2F-218ENST00000454786 FLT4P35916 1363 aa24.04■■□□□ 1.44
UBE2F-218ENST00000454786 KIF24Q5T7B8 1368 aa24.04■■□□□ 1.44
UBE2F-218ENST00000454786 KCNQ4P56696 695 aa24.04■■□□□ 1.44
UBE2F-218ENST00000454786 USHBP1Q8N6Y0 703 aa24.04■■□□□ 1.44
UBE2F-218ENST00000454786 ZNF784Q8NCA9 323 aaPredicted RBP24.04■■□□□ 1.44
UBE2F-218ENST00000454786 RAPGEF4Q8WZA2 1011 aa24.04■■□□□ 1.44
UBE2F-218ENST00000454786 CCNL1Q9UK58 526 aaPredicted RBP24.03■■□□□ 1.44
UBE2F-218ENST00000454786 CDCA8Q53HL2 280 aa24.02■■□□□ 1.44
UBE2F-218ENST00000454786 KLHL34Q8N239 644 aa24.02■■□□□ 1.44
UBE2F-218ENST00000454786 UBR3Q6ZT12 1888 aa24.02■■□□□ 1.44
UBE2F-218ENST00000454786 TATP17735 454 aaPredicted RBP24.01■■□□□ 1.43
UBE2F-218ENST00000454786 PCDH11XQ9BZA7 1347 aa24.01■■□□□ 1.43
UBE2F-218ENST00000454786 PCDH11YQ9BZA8 1340 aa24.01■■□□□ 1.43
UBE2F-218ENST00000454786 C4BP0C0L5 1744 aa24.01■■□□□ 1.43
UBE2F-218ENST00000454786 NSD3Q9BZ95 1437 aa23.99■■□□□ 1.43
UBE2F-218ENST00000454786 GPR162Q16538 588 aa23.98■■□□□ 1.43
UBE2F-218ENST00000454786 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
UBE2F-218ENST00000454786 NCAPD2Q15021 1401 aa23.95■■□□□ 1.42
UBE2F-218ENST00000454786 MSH5O43196 834 aa23.94■■□□□ 1.42
UBE2F-218ENST00000454786 PALLDQ8WX93 1383 aa23.93■■□□□ 1.42
UBE2F-218ENST00000454786 TRIM26Q12899 539 aaPredicted RBP23.93■■□□□ 1.42
UBE2F-218ENST00000454786 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
UBE2F-218ENST00000454786 HMGB2P26583 209 aaKnown RBP23.91■■□□□ 1.42
UBE2F-218ENST00000454786 COL23A1Q86Y22 540 aaPredicted RBP23.91■■□□□ 1.42
UBE2F-218ENST00000454786 NLGN2Q8NFZ4 835 aa23.91■■□□□ 1.42
UBE2F-218ENST00000454786 EMILIN1Q9Y6C2 1016 aa23.91■■□□□ 1.42
UBE2F-218ENST00000454786 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
UBE2F-218ENST00000454786 CYP27B1O15528 508 aa23.89■■□□□ 1.41
UBE2F-218ENST00000454786 MPRIPQ6WCQ1 1025 aa23.89■■□□□ 1.41
UBE2F-218ENST00000454786 MSL1Q68DK7 614 aa23.87■■□□□ 1.41
UBE2F-218ENST00000454786 FLAD1Q8NFF5 587 aa23.86■■□□□ 1.41
UBE2F-218ENST00000454786 PPM1GO15355 546 aaPredicted RBP23.85■■□□□ 1.41
UBE2F-218ENST00000454786 SMARCC1Q92922 1105 aaPredicted RBP23.85■■□□□ 1.41
UBE2F-218ENST00000454786 ZNF831Q5JPB2 1677 aa23.83■■□□□ 1.41
UBE2F-218ENST00000454786 SPG7Q9UQ90 795 aa23.83■■□□□ 1.41
UBE2F-218ENST00000454786 WASHC2AQ641Q2 1341 aa23.83■■□□□ 1.4
UBE2F-218ENST00000454786 COL5A3P25940 1745 aaPredicted RBP23.82■■□□□ 1.4
UBE2F-218ENST00000454786 C1QTNF8P60827 252 aa23.82■■□□□ 1.4
UBE2F-218ENST00000454786 AK7Q96M32 723 aa23.82■■□□□ 1.4
UBE2F-218ENST00000454786 TIMELESSQ9UNS1 1208 aa23.82■■□□□ 1.4
UBE2F-218ENST00000454786 GRIN3BO60391 1043 aa23.81■■□□□ 1.4
UBE2F-218ENST00000454786 KIF13BQ9NQT8 1826 aa23.8■■□□□ 1.4
UBE2F-218ENST00000454786 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.41e-6■■□□□ 11.6
UBE2F-218ENST00000454786 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
UBE2F-218ENST00000454786 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
UBE2F-218ENST00000454786 PIGBQ92521 554 aa23.79■■□□□ 1.4
UBE2F-218ENST00000454786 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
UBE2F-218ENST00000454786 GIGYF1O75420 1035 aaPredicted RBP23.78■■□□□ 1.4
UBE2F-218ENST00000454786 EYA1Q99502 592 aa23.78■■□□□ 1.4
UBE2F-218ENST00000454786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.78■■□□□ 1.4
UBE2F-218ENST00000454786 CD2APQ9Y5K6 639 aa23.78■■□□□ 1.4
UBE2F-218ENST00000454786 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
UBE2F-218ENST00000454786 TMOD3Q9NYL9 352 aa23.77■■□□□ 1.4
UBE2F-218ENST00000454786 PHF14O94880 888 aa23.76■■□□□ 1.39
UBE2F-218ENST00000454786 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
UBE2F-218ENST00000454786 POLKQ9UBT6 870 aa23.75■■□□□ 1.39
UBE2F-218ENST00000454786 C4AP0C0L4 1744 aa23.75■■□□□ 1.39
UBE2F-218ENST00000454786 KIAA1551Q9HCM1 1747 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 LOC102724428A0A0B4J2F2 783 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 SSFA2P28290 1259 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 SIK1P57059 783 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 AMIGO3Q86WK7 504 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 IFNL2Q8IZJ0 200 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 POLR3GLQ9BT43 218 aa23.74■■□□□ 1.39
UBE2F-218ENST00000454786 N4BP2Q86UW6 1770 aaPredicted RBP23.73■■□□□ 1.39
UBE2F-218ENST00000454786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.73■■□□□ 1.39
UBE2F-218ENST00000454786 PHKG2P15735 406 aa23.73■■□□□ 1.39
UBE2F-218ENST00000454786 LINC00116Q8NCU8 138 aa23.72■■□□□ 1.39
UBE2F-218ENST00000454786 EIF4A2Q14240 407 aaKnown RBP23.71■■□□□ 1.39
UBE2F-218ENST00000454786 BRCA1P38398 1863 aaKnown RBP23.7■■□□□ 1.39
UBE2F-218ENST00000454786 SCN11AQ9UI33 1791 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms