RNA–Protein interactions for RNA: ENST00000454035.5

MDH1-208, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-208ENST00000454035 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
MDH1-208ENST00000454035 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
MDH1-208ENST00000454035 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
MDH1-208ENST00000454035 BMP2KQ9NSY1 1161 aaPredicted RBP8.32□□□□□ -1.08
MDH1-208ENST00000454035 POLR3AO14802 1390 aaPredicted RBP8.32□□□□□ -1.08
MDH1-208ENST00000454035 EP400Q96L91 3159 aa8.32□□□□□ -1.08
MDH1-208ENST00000454035 QRICH2Q9H0J4 1663 aa8.31□□□□□ -1.08
MDH1-208ENST00000454035 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
MDH1-208ENST00000454035 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
MDH1-208ENST00000454035 TESK2Q96S53 571 aa8.31□□□□□ -1.08
MDH1-208ENST00000454035 QTRT2Q9H974 415 aaKnown RBP8.31□□□□□ -1.08
MDH1-208ENST00000454035 TRIM35Q9UPQ4 493 aa8.31□□□□□ -1.08
MDH1-208ENST00000454035 MARF1Q9Y4F3 1742 aaKnown RBP8.31□□□□□ -1.08
MDH1-208ENST00000454035 ACEP12821 1306 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 TNS3Q68CZ2 1445 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 ST20-MTHFSA0A0A6YYL1 179 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 SEC24BO95487 1268 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 PLPP6Q8IY26 295 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 CABP1Q9NZU7 370 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 COLQQ9Y215 455 aaPredicted RBP8.3□□□□□ -1.08
MDH1-208ENST00000454035 BRWD3Q6RI45 1802 aa8.3□□□□□ -1.08
MDH1-208ENST00000454035 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
MDH1-208ENST00000454035 COL22A1Q8NFW1 1626 aaPredicted RBP8.29□□□□□ -1.08
MDH1-208ENST00000454035 ZNF316A6NFI3 1004 aaPredicted RBP8.29□□□□□ -1.08
MDH1-208ENST00000454035 RBM6P78332 1123 aaKnown RBP8.29□□□□□ -1.08
MDH1-208ENST00000454035 ARHGEF10O15013 1369 aa8.29□□□□□ -1.08
MDH1-208ENST00000454035 TOPAZ1Q8N9V7 1692 aa8.29□□□□□ -1.08
MDH1-208ENST00000454035 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
MDH1-208ENST00000454035 BRD4O60885 1362 aaPredicted RBP8.28□□□□□ -1.08
MDH1-208ENST00000454035 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
MDH1-208ENST00000454035 USP47Q96K76 1375 aa8.28□□□□□ -1.08
MDH1-208ENST00000454035 ADAMTS2O95450 1211 aa8.28□□□□□ -1.08
MDH1-208ENST00000454035 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
MDH1-208ENST00000454035 TMEM121BQ9BXQ6 578 aaPredicted RBP8.28□□□□□ -1.08
MDH1-208ENST00000454035 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
MDH1-208ENST00000454035 TRPM3Q9HCF6 1732 aaPredicted RBP8.28□□□□□ -1.08
MDH1-208ENST00000454035 C2orf72A6NCS6 295 aa8.27□□□□□ -1.09
MDH1-208ENST00000454035 IRF6O14896 467 aa8.27□□□□□ -1.09
MDH1-208ENST00000454035 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
MDH1-208ENST00000454035 PDCD7Q8N8D1 485 aaKnown RBP8.27□□□□□ -1.09
MDH1-208ENST00000454035 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
MDH1-208ENST00000454035 SSH2Q76I76 1423 aa8.27□□□□□ -1.09
MDH1-208ENST00000454035 MAP2K5Q13163 448 aa8.26□□□□□ -1.09
MDH1-208ENST00000454035 CABLES1Q8TDN4 633 aa8.26□□□□□ -1.09
MDH1-208ENST00000454035 NGLY1Q96IV0 654 aa8.26□□□□□ -1.09
MDH1-208ENST00000454035 ALS2Q96Q42 1657 aa8.26□□□□□ -1.09
MDH1-208ENST00000454035 CPSF1Q10570 1443 aaKnown RBP8.26□□□□□ -1.09
MDH1-208ENST00000454035 FECHP22830 423 aa8.25□□□□□ -1.09
MDH1-208ENST00000454035 SLC12A5Q9H2X9 1139 aa8.25□□□□□ -1.09
MDH1-208ENST00000454035 USP6P35125 1406 aa8.25□□□□□ -1.09
MDH1-208ENST00000454035 KIF3CO14782 793 aa8.24□□□□□ -1.09
MDH1-208ENST00000454035 OSBPP22059 807 aa8.24□□□□□ -1.09
MDH1-208ENST00000454035 TMF1P82094 1093 aa8.24□□□□□ -1.09
MDH1-208ENST00000454035 ABTB2Q8N961 1025 aa8.24□□□□□ -1.09
MDH1-208ENST00000454035 TTC21BQ7Z4L5 1316 aa8.24□□□□□ -1.09
MDH1-208ENST00000454035 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 GNPATO15228 680 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 EIF4G2P78344 907 aaKnown RBP eCLIP8.23□□□□□ -1.09
MDH1-208ENST00000454035 AMHR2Q16671 573 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 PARP9Q8IXQ6 854 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 USP21Q9UK80 565 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 CD163L1Q9NR16 1453 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 USP19O94966 1318 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 TTC21AQ8NDW8 1320 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 SLIT2O94813 1529 aa8.23□□□□□ -1.09
MDH1-208ENST00000454035 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 HSPA5P11021 654 aaKnown RBP8.22□□□□□ -1.09
MDH1-208ENST00000454035 CDCA8Q53HL2 280 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 NUTM2GQ5VZR2 741 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 NLRP13Q86W25 1043 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 DDX12PQ92771 950 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 MARVELD3Q96A59 401 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 TERF2IPQ9NYB0 399 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 BOLA1Q9Y3E2 137 aa8.22□□□□□ -1.09
MDH1-208ENST00000454035 KTN1Q86UP2 1357 aaKnown RBP8.22□□□□□ -1.09
MDH1-208ENST00000454035 ATRNO75882 1429 aa8.21□□□□□ -1.09
MDH1-208ENST00000454035 GCP02774 474 aa8.21□□□□□ -1.1
MDH1-208ENST00000454035 HDGFL2Q7Z4V5 671 aaPredicted RBP8.21□□□□□ -1.1
MDH1-208ENST00000454035 UNC5CLQ8IV45 518 aa8.21□□□□□ -1.1
MDH1-208ENST00000454035 TRPC5Q9UL62 973 aaPredicted RBP8.21□□□□□ -1.1
MDH1-208ENST00000454035 LRP5O75197 1615 aa8.21□□□□□ -1.1
MDH1-208ENST00000454035 ABCA3Q99758 1704 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.2□□□□□ -1.1
MDH1-208ENST00000454035 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 AKAP12Q02952 1782 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 FCHSD2O94868 740 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 IRX5P78411 483 aaPredicted RBP8.2□□□□□ -1.1
MDH1-208ENST00000454035 HIC1Q14526 733 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 A0A1W2PP64 1363 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 CPDO75976 1380 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 USP31Q70CQ4 1352 aa8.2□□□□□ -1.1
MDH1-208ENST00000454035 EDC4Q6P2E9 1401 aaKnown RBP8.2□□□□□ -1.1
MDH1-208ENST00000454035 G3V3G9 751 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 PTGER2P43116 358 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 ZC3H6P61129 1189 aaKnown RBP8.19□□□□□ -1.1
MDH1-208ENST00000454035 DEFB132Q7Z7B7 95 aa8.19□□□□□ -1.1
MDH1-208ENST00000454035 ARID3AQ99856 593 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms