RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 LCE2DQ5TA82 110 aaPredicted RBP6.84□□□□□ -1.31
HMGN3P1-201ENST00000453847 ANKRD13DQ6ZTN6 518 aa6.84□□□□□ -1.31
HMGN3P1-201ENST00000453847 GTF3C2Q8WUA4 911 aaPredicted RBP6.84□□□□□ -1.31
HMGN3P1-201ENST00000453847 C1QTNF2Q9BXJ5 285 aa6.84□□□□□ -1.31
HMGN3P1-201ENST00000453847 LINC01559Q495D7 138 aa6.83□□□□□ -1.32
HMGN3P1-201ENST00000453847 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
HMGN3P1-201ENST00000453847 H3BRB1 525 aa6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 FKBP5Q13451 457 aaPredicted RBP6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 MTMR3Q13615 1198 aa6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 BPHLQ86WA6 291 aaPredicted RBP6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 ZNF511Q8NB15 262 aa6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 MTRQ99707 1265 aa6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 TUT1Q9H6E5 874 aaKnown RBP6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 MYT1LQ9UL68 1186 aa6.82□□□□□ -1.32
HMGN3P1-201ENST00000453847 TJAP1Q5JTD0 557 aa6.81□□□□□ -1.32
HMGN3P1-201ENST00000453847 THSD4Q6ZMP0 1018 aa6.81□□□□□ -1.32
HMGN3P1-201ENST00000453847 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGN3P1-201ENST00000453847 PCDHB11Q9Y5F2 797 aa6.81□□□□□ -1.32
HMGN3P1-201ENST00000453847 POTEMA6NI47 508 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 C21orf2O43822 256 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 SCTRP47872 440 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 USP4Q13107 963 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 RNF20Q5VTR2 975 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 LHX8Q68G74 356 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 NKX2-3Q8TAU0 364 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 FAM163AQ96GL9 167 aaPredicted RBP6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 STAC3Q96MF2 364 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 ASB16Q96NS5 453 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 HINFPQ9BQA5 517 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 MKNK1Q9BUB5 465 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 SLC6A16Q9GZN6 736 aa6.8□□□□□ -1.32
HMGN3P1-201ENST00000453847 M0R2N6 131 aa6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 VAMP1P23763 118 aa6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 SH3BP2P78314 561 aa6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 FKBP4Q02790 459 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 TRMT44Q8IYL2 757 aaKnown RBP6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 PCDH10Q9P2E7 1040 aa6.79□□□□□ -1.32
HMGN3P1-201ENST00000453847 TMEM229AB2RXF0 380 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 PSME1Q06323 249 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 AGERQ15109 404 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 GLYCTKQ8IVS8 523 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 ZNF358Q9NW07 568 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 USP35Q9P2H5 1018 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 DCTN4Q9UJW0 460 aa6.78□□□□□ -1.32
HMGN3P1-201ENST00000453847 S1PR4O95977 384 aa6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 TCF3P15923 654 aa6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 NPR3P17342 541 aa6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 MAPK1P28482 360 aa6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 SEPT12Q8IYM1 358 aa6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 SLC10A4Q96EP9 437 aa6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 FCF1Q9Y324 198 aaKnown RBP6.77□□□□□ -1.33
HMGN3P1-201ENST00000453847 SCNN1DP51172 638 aa6.76□□□□□ -1.33
HMGN3P1-201ENST00000453847 SF3B2Q13435 895 aaKnown RBP6.76□□□□□ -1.33
HMGN3P1-201ENST00000453847 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
HMGN3P1-201ENST00000453847 ERVH48-1M5A8F1 160 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 RECKO95980 971 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 EPHA4P54764 986 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 NBPF20Q3BBV1 942 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 LDLRAD1Q5T700 205 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 COL26A1Q96A83 441 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 KCTD15Q96SI1 283 aaPredicted RBP6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 SAP130Q9H0E3 1048 aa6.75□□□□□ -1.33
HMGN3P1-201ENST00000453847 PTCD1O75127 700 aaKnown RBP6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 IGFBP4P22692 258 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 RAB15P59190 212 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 SKOR1P84550 965 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 TNS4Q8IZW8 715 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 HELQQ8TDG4 1101 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 KCTD12Q96CX2 325 aaKnown RBP6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 OSBPL3Q9H4L5 887 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 IL21Q9HBE4 155 aa6.74□□□□□ -1.33
HMGN3P1-201ENST00000453847 PPEF1O14829 653 aaPredicted RBP6.73□□□□□ -1.33
HMGN3P1-201ENST00000453847 ERVK-9P63128 1117 aa6.73□□□□□ -1.33
HMGN3P1-201ENST00000453847 COL19A1Q14993 1142 aa6.73□□□□□ -1.33
HMGN3P1-201ENST00000453847 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
HMGN3P1-201ENST00000453847 ATAD2Q6PL18 1390 aa6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 IGHA2P01877 340 aa6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 P4HBP07237 508 aaKnown RBP6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 PLA2G2CQ5R387 149 aa6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 NYAP1Q6ZVC0 841 aa6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 TMC7Q7Z402 723 aa6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 CCDC125Q86Z20 511 aa6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 SCG3Q8WXD2 468 aaKnown RBP6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
HMGN3P1-201ENST00000453847 A0A1W2PRU2 124 aa6.71□□□□□ -1.34
HMGN3P1-201ENST00000453847 FAM26DQ5JW98 314 aa6.71□□□□□ -1.34
HMGN3P1-201ENST00000453847 RBCK1Q9BYM8 510 aa6.71□□□□□ -1.34
HMGN3P1-201ENST00000453847 TSPAN10Q9H1Z9 355 aaPredicted RBP6.71□□□□□ -1.34
HMGN3P1-201ENST00000453847 TMPRSS4Q9NRS4 437 aa6.71□□□□□ -1.34
HMGN3P1-201ENST00000453847 RNF19AQ9NV58 838 aa6.71□□□□□ -1.34
HMGN3P1-201ENST00000453847 WASLO00401 505 aaPredicted RBP6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 FOXO3O43524 673 aa6.7□□□□□ -1.34
HMGN3P1-201ENST00000453847 MYCP01106 439 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms