RNA–Protein interactions for RNA: ENST00000453835.1

CR559946.1-201, humanhuman

TSL 4 BASIC

Gene CR559946.1, Length 531 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR559946.1-201ENST00000453835 DOT1LQ8TEK3 1739 aa23.79■■□□□ 1.4
CR559946.1-201ENST00000453835 FYB1O15117 783 aa23.78■■□□□ 1.4
CR559946.1-201ENST00000453835 NBPF6Q5VWK0 638 aa23.78■■□□□ 1.4
CR559946.1-201ENST00000453835 NBPF4Q96M43 638 aa23.78■■□□□ 1.4
CR559946.1-201ENST00000453835 PNPLA7Q6ZV29 1317 aa23.78■■□□□ 1.4
CR559946.1-201ENST00000453835 USHBP1Q8N6Y0 703 aa23.77■■□□□ 1.4
CR559946.1-201ENST00000453835 SLC24A1O60721 1099 aa23.75■■□□□ 1.39
CR559946.1-201ENST00000453835 ZNF784Q8NCA9 323 aaPredicted RBP23.75■■□□□ 1.39
CR559946.1-201ENST00000453835 TUBGCP6Q96RT7 1819 aa23.75■■□□□ 1.39
CR559946.1-201ENST00000453835 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
CR559946.1-201ENST00000453835 MAP3K5Q99683 1374 aa23.74■■□□□ 1.39
CR559946.1-201ENST00000453835 GOLGB1Q14789 3259 aaKnown RBP23.74■■□□□ 1.39
CR559946.1-201ENST00000453835 QSER1Q2KHR3 1735 aa23.73■■□□□ 1.39
CR559946.1-201ENST00000453835 TMF1P82094 1093 aa23.73■■□□□ 1.39
CR559946.1-201ENST00000453835 TFCP2L1Q9NZI6 479 aa23.73■■□□□ 1.39
CR559946.1-201ENST00000453835 USP47Q96K76 1375 aa23.73■■□□□ 1.39
CR559946.1-201ENST00000453835 LY75O60449 1722 aa23.73■■□□□ 1.39
CR559946.1-201ENST00000453835 SLC16A10Q8TF71 515 aa23.72■■□□□ 1.39
CR559946.1-201ENST00000453835 HSP90AB2PQ58FF8 381 aa23.7■■□□□ 1.38
CR559946.1-201ENST00000453835 KLHL34Q8N239 644 aa23.7■■□□□ 1.38
CR559946.1-201ENST00000453835 COL24A1Q17RW2 1714 aa23.7■■□□□ 1.38
CR559946.1-201ENST00000453835 CCNL1Q9UK58 526 aaPredicted RBP23.69■■□□□ 1.38
CR559946.1-201ENST00000453835 CHD4Q14839 1912 aa23.67■■□□□ 1.38
CR559946.1-201ENST00000453835 POLD1P28340 1107 aa23.67■■□□□ 1.38
CR559946.1-201ENST00000453835 RAPGEF4Q8WZA2 1011 aa23.67■■□□□ 1.38
CR559946.1-201ENST00000453835 INSRP06213 1382 aa23.66■■□□□ 1.38
CR559946.1-201ENST00000453835 CARD14Q9BXL6 1004 aa23.66■■□□□ 1.38
CR559946.1-201ENST00000453835 SMG6Q86US8 1419 aaKnown RBP23.66■■□□□ 1.38
CR559946.1-201ENST00000453835 KIF20BQ96Q89 1820 aa23.66■■□□□ 1.38
CR559946.1-201ENST00000453835 CGNL1Q0VF96 1302 aa23.65■■□□□ 1.38
CR559946.1-201ENST00000453835 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
CR559946.1-201ENST00000453835 GPR162Q16538 588 aa23.65■■□□□ 1.38
CR559946.1-201ENST00000453835 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.37
CR559946.1-201ENST00000453835 NLGN2Q8NFZ4 835 aa23.64■■□□□ 1.37
CR559946.1-201ENST00000453835 FLT4P35916 1363 aa23.63■■□□□ 1.37
CR559946.1-201ENST00000453835 EMILIN1Q9Y6C2 1016 aa23.62■■□□□ 1.37
CR559946.1-201ENST00000453835 CYP27B1O15528 508 aa23.61■■□□□ 1.37
CR559946.1-201ENST00000453835 MSH5O43196 834 aa23.61■■□□□ 1.37
CR559946.1-201ENST00000453835 PELP1Q8IZL8 1130 aaKnown RBP23.61■■□□□ 1.37
CR559946.1-201ENST00000453835 PCDH11XQ9BZA7 1347 aa23.6■■□□□ 1.37
CR559946.1-201ENST00000453835 PCDH11YQ9BZA8 1340 aa23.6■■□□□ 1.37
CR559946.1-201ENST00000453835 CDCA8Q53HL2 280 aa23.6■■□□□ 1.37
CR559946.1-201ENST00000453835 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
CR559946.1-201ENST00000453835 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
CR559946.1-201ENST00000453835 MSL1Q68DK7 614 aa23.59■■□□□ 1.37
CR559946.1-201ENST00000453835 MPRIPQ6WCQ1 1025 aa23.59■■□□□ 1.37
CR559946.1-201ENST00000453835 KIF24Q5T7B8 1368 aa23.58■■□□□ 1.37
CR559946.1-201ENST00000453835 C5P01031 1676 aa23.57■■□□□ 1.36
CR559946.1-201ENST00000453835 PALLDQ8WX93 1383 aa23.57■■□□□ 1.36
CR559946.1-201ENST00000453835 TOGARAM1Q9Y4F4 1720 aa23.57■■□□□ 1.36
CR559946.1-201ENST00000453835 PPM1GO15355 546 aaPredicted RBP23.55■■□□□ 1.36
CR559946.1-201ENST00000453835 YBX3P16989 372 aaKnown RBP eCLIP23.54■■□□□ 1.36
CR559946.1-201ENST00000453835 TAF1LQ8IZX4 1826 aa23.54■■□□□ 1.36
CR559946.1-201ENST00000453835 NCAPD2Q15021 1401 aa23.53■■□□□ 1.36
CR559946.1-201ENST00000453835 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
CR559946.1-201ENST00000453835 ITGB4P16144 1822 aa23.53■■□□□ 1.36
CR559946.1-201ENST00000453835 PKD1L3Q7Z443 1732 aa23.53■■□□□ 1.36
CR559946.1-201ENST00000453835 SMIM5Q71RC9 77 aa23.52■■□□□ 1.36
CR559946.1-201ENST00000453835 PIGBQ92521 554 aa23.52■■□□□ 1.36
CR559946.1-201ENST00000453835 C1QTNF8P60827 252 aa23.51■■□□□ 1.35
CR559946.1-201ENST00000453835 EYA1Q99502 592 aa23.5■■□□□ 1.35
CR559946.1-201ENST00000453835 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
CR559946.1-201ENST00000453835 ANKRD26Q9UPS8 1709 aa23.5■■□□□ 1.35
CR559946.1-201ENST00000453835 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
CR559946.1-201ENST00000453835 C4BP0C0L5 1744 aa23.49■■□□□ 1.35
CR559946.1-201ENST00000453835 SMARCC1Q92922 1105 aaPredicted RBP23.48■■□□□ 1.35
CR559946.1-201ENST00000453835 FLAD1Q8NFF5 587 aa23.47■■□□□ 1.35
CR559946.1-201ENST00000453835 POLKQ9UBT6 870 aa23.47■■□□□ 1.35
CR559946.1-201ENST00000453835 SPG7Q9UQ90 795 aa23.47■■□□□ 1.35
CR559946.1-201ENST00000453835 MAP2P11137 1827 aaKnown RBP23.47■■□□□ 1.35
CR559946.1-201ENST00000453835 SENP3-EIF4A1A0A087X0R7 540 aa23.46■■□□□ 1.35
CR559946.1-201ENST00000453835 AK7Q96M32 723 aa23.46■■□□□ 1.35
CR559946.1-201ENST00000453835 PHF14O94880 888 aa23.45■■□□□ 1.34
CR559946.1-201ENST00000453835 GRIN3BO60391 1043 aa23.44■■□□□ 1.34
CR559946.1-201ENST00000453835 LINC00116Q8NCU8 138 aa23.44■■□□□ 1.34
CR559946.1-201ENST00000453835 POLR3GLQ9BT43 218 aa23.44■■□□□ 1.34
CR559946.1-201ENST00000453835 CD2APQ9Y5K6 639 aa23.44■■□□□ 1.34
CR559946.1-201ENST00000453835 UBR3Q6ZT12 1888 aa23.43■■□□□ 1.34
CR559946.1-201ENST00000453835 TNNT2P45379 298 aaPredicted RBP23.43■■□□□ 1.34
CR559946.1-201ENST00000453835 ASAP1Q9ULH1 1129 aa23.43■■□□□ 1.34
CR559946.1-201ENST00000453835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
CR559946.1-201ENST00000453835 LOC102724428A0A0B4J2F2 783 aa23.42■■□□□ 1.34
CR559946.1-201ENST00000453835 PHKG2P15735 406 aa23.42■■□□□ 1.34
CR559946.1-201ENST00000453835 SIK1P57059 783 aa23.42■■□□□ 1.34
CR559946.1-201ENST00000453835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.42■■□□□ 1.34
CR559946.1-201ENST00000453835 TIMELESSQ9UNS1 1208 aa23.42■■□□□ 1.34
CR559946.1-201ENST00000453835 GIGYF1O75420 1035 aaPredicted RBP23.41■■□□□ 1.34
CR559946.1-201ENST00000453835 HMGB2P26583 209 aaKnown RBP23.41■■□□□ 1.34
CR559946.1-201ENST00000453835 ITPK1Q13572 414 aa23.41■■□□□ 1.34
CR559946.1-201ENST00000453835 EIF4A2Q14240 407 aaKnown RBP23.41■■□□□ 1.34
CR559946.1-201ENST00000453835 TMOD3Q9NYL9 352 aa23.41■■□□□ 1.34
CR559946.1-201ENST00000453835 IFNL2Q8IZJ0 200 aa23.39■■□□□ 1.33
CR559946.1-201ENST00000453835 ATG3Q9NT62 314 aa23.38■■□□□ 1.33
CR559946.1-201ENST00000453835 WWC3Q9ULE0 1092 aa23.38■■□□□ 1.33
CR559946.1-201ENST00000453835 SSFA2P28290 1259 aa23.37■■□□□ 1.33
CR559946.1-201ENST00000453835 PCGF6Q9BYE7 350 aa23.37■■□□□ 1.33
CR559946.1-201ENST00000453835 ATP6V1AP38606 617 aa23.36■■□□□ 1.33
CR559946.1-201ENST00000453835 CEP350Q5VT06 3117 aa23.35■■□□□ 1.33
CR559946.1-201ENST00000453835 GNPATO15228 680 aa23.35■■□□□ 1.33
CR559946.1-201ENST00000453835 IGSF1Q8N6C5 1336 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms