RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 C3P01024 1663 aa9.97□□□□□ -0.81
BRCC3-208ENST00000453705 ERBB3P21860 1342 aa9.97□□□□□ -0.81
BRCC3-208ENST00000453705 C11orf96Q7Z7L8 435 aa9.97□□□□□ -0.81
BRCC3-208ENST00000453705 CHPF2Q9P2E5 772 aa9.97□□□□□ -0.81
BRCC3-208ENST00000453705 ZNF142P52746 1687 aaPredicted RBP9.96□□□□□ -0.81
BRCC3-208ENST00000453705 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
BRCC3-208ENST00000453705 CPS1P31327 1500 aa9.96□□□□□ -0.81
BRCC3-208ENST00000453705 PTPRMP28827 1452 aa9.96□□□□□ -0.81
BRCC3-208ENST00000453705 ADGRF5Q8IZF2 1346 aa9.96□□□□□ -0.81
BRCC3-208ENST00000453705 MYBBP1AQ9BQG0 1328 aaKnown RBP9.96□□□□□ -0.81
BRCC3-208ENST00000453705 EPB41L2O43491 1005 aaKnown RBP9.96□□□□□ -0.81
BRCC3-208ENST00000453705 C9orf131Q5VYM1 1079 aa9.96□□□□□ -0.81
BRCC3-208ENST00000453705 ADGRB2O60241 1585 aa9.96□□□□□ -0.82
BRCC3-208ENST00000453705 DIP2AQ14689 1571 aa9.96□□□□□ -0.82
BRCC3-208ENST00000453705 RGL3Q3MIN7 710 aa9.96□□□□□ -0.82
BRCC3-208ENST00000453705 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
BRCC3-208ENST00000453705 SPACA7Q96KW9 195 aa9.96□□□□□ -0.82
BRCC3-208ENST00000453705 CALR3Q96L12 384 aaKnown RBP9.96□□□□□ -0.82
BRCC3-208ENST00000453705 LNPKQ9C0E8 428 aa9.96□□□□□ -0.82
BRCC3-208ENST00000453705 TULP4Q9NRJ4 1543 aa9.95□□□□□ -0.82
BRCC3-208ENST00000453705 GET4Q7L5D6 327 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-208ENST00000453705 BCL2L13Q9BXK5 485 aa9.95□□□□□ -0.82
BRCC3-208ENST00000453705 MAF1Q9H063 256 aa9.95□□□□□ -0.82
BRCC3-208ENST00000453705 TECPR2O15040 1411 aa9.95□□□□□ -0.82
BRCC3-208ENST00000453705 VGFO15240 615 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-208ENST00000453705 CREBRFQ8IUR6 639 aa9.95□□□□□ -0.82
BRCC3-208ENST00000453705 METTL14Q9HCE5 456 aaKnown RBP9.95□□□□□ -0.82
BRCC3-208ENST00000453705 BLMP54132 1417 aaPredicted RBP9.95□□□□□ -0.82
BRCC3-208ENST00000453705 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 ESF1Q9H501 851 aaKnown RBP9.94□□□□□ -0.82
BRCC3-208ENST00000453705 SH3BP1Q9Y3L3 701 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 SLIT1O75093 1534 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 ERCC3P19447 782 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 TBC1D2Q9BYX2 928 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 UBA5Q9GZZ9 404 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 MED14O60244 1454 aa9.94□□□□□ -0.82
BRCC3-208ENST00000453705 ABCB7O75027 752 aa9.93□□□□□ -0.82
BRCC3-208ENST00000453705 MLECQ14165 292 aa9.93□□□□□ -0.82
BRCC3-208ENST00000453705 CCDC181Q5TID7 509 aa9.93□□□□□ -0.82
BRCC3-208ENST00000453705 GLMNQ92990 594 aa9.93□□□□□ -0.82
BRCC3-208ENST00000453705 PRR12Q9ULL5 1215 aa9.93□□□□□ -0.82
BRCC3-208ENST00000453705 ARHGAP23Q9P227 1491 aa9.93□□□□□ -0.82
BRCC3-208ENST00000453705 HELBQ8NG08 1087 aaPredicted RBP9.93□□□□□ -0.82
BRCC3-208ENST00000453705 YTHDC1Q96MU7 727 aaKnown RBP9.93□□□□□ -0.82
BRCC3-208ENST00000453705 MPNDQ8N594 471 aa9.92□□□□□ -0.82
BRCC3-208ENST00000453705 SNRKQ9NRH2 765 aa9.92□□□□□ -0.82
BRCC3-208ENST00000453705 hCG_2014768A0A024R1R8 64 aa9.92□□□□□ -0.82
BRCC3-208ENST00000453705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-208ENST00000453705 WDHD1O75717 1129 aaPredicted RBP9.92□□□□□ -0.82
BRCC3-208ENST00000453705 BDNFP23560 247 aa9.92□□□□□ -0.82
BRCC3-208ENST00000453705 CCDC96Q2M329 555 aa9.92□□□□□ -0.82
BRCC3-208ENST00000453705 KIF20BQ96Q89 1820 aa9.92□□□□□ -0.82
BRCC3-208ENST00000453705 TBC1D12O60347 775 aa9.91□□□□□ -0.82
BRCC3-208ENST00000453705 LMOD3Q0VAK6 560 aa9.91□□□□□ -0.82
BRCC3-208ENST00000453705 PIF1Q9H611 641 aa9.91□□□□□ -0.82
BRCC3-208ENST00000453705 CCDC189A1A4V9 331 aa9.91□□□□□ -0.82
BRCC3-208ENST00000453705 GNL3LQ9NVN8 582 aaKnown RBP9.91□□□□□ -0.82
BRCC3-208ENST00000453705 NSD2O96028 1365 aa9.91□□□□□ -0.82
BRCC3-208ENST00000453705 ADAMTSL3P82987 1691 aa9.91□□□□□ -0.82
BRCC3-208ENST00000453705 AKAP12Q02952 1782 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 TOPAZ1Q8N9V7 1692 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 ZNF500O60304 480 aaPredicted RBP9.9□□□□□ -0.82
BRCC3-208ENST00000453705 EVA1CP58658 441 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 IDI1Q13907 227 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 CENPJQ9HC77 1338 aaPredicted RBP9.9□□□□□ -0.82
BRCC3-208ENST00000453705 CLGNO14967 610 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 DHX16O60231 1041 aaKnown RBP9.9□□□□□ -0.82
BRCC3-208ENST00000453705 RECKO95980 971 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 PTPROQ16827 1216 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 EGFLAMQ63HQ2 1017 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 ZNF622Q969S3 477 aaKnown RBP eCLIP9.9□□□□□ -0.82
BRCC3-208ENST00000453705 FAM135BQ49AJ0 1406 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 RIMS2Q9UQ26 1411 aa9.9□□□□□ -0.82
BRCC3-208ENST00000453705 SHPRHQ149N8 1683 aa9.9□□□□□ -0.83
BRCC3-208ENST00000453705 ZMYM3Q14202 1370 aa9.9□□□□□ -0.83
BRCC3-208ENST00000453705 CAPN15O75808 1086 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 CFAP70Q5T0N1 1121 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 ATL2Q8NHH9 583 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 PNISRQ8TF01 805 aaKnown RBP9.89□□□□□ -0.83
BRCC3-208ENST00000453705 DHX38Q92620 1227 aaKnown RBP9.89□□□□□ -0.83
BRCC3-208ENST00000453705 PBXIP1Q96AQ6 731 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 SMG6Q86US8 1419 aaKnown RBP9.89□□□□□ -0.83
BRCC3-208ENST00000453705 YTHDC2Q9H6S0 1430 aaKnown RBP9.89□□□□□ -0.83
BRCC3-208ENST00000453705 MON2Q7Z3U7 1717 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 MS4A1P11836 297 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 GYS2P54840 703 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 GDPD2Q9HCC8 539 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 ARID4AP29374 1257 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-208ENST00000453705 CCDC146Q8IYE0 955 aa9.89□□□□□ -0.83
BRCC3-208ENST00000453705 RTL5Q5HYW3 569 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-208ENST00000453705 ABCC11Q96J66 1382 aa9.88□□□□□ -0.83
BRCC3-208ENST00000453705 ZNF280DQ6N043 979 aa9.88□□□□□ -0.83
BRCC3-208ENST00000453705 SDR16C5Q8N3Y7 309 aa9.88□□□□□ -0.83
BRCC3-208ENST00000453705 PCMTD1Q96MG8 357 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-208ENST00000453705 USP54Q70EL1 1684 aa9.88□□□□□ -0.83
BRCC3-208ENST00000453705 TNRQ92752 1358 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 CSB-PGBD3P0DP91 1061 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 IGBP1P78318 339 aa9.87□□□□□ -0.83
BRCC3-208ENST00000453705 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms