RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
USP25-206ENST00000453553 USP4Q13107 963 aa9.06□□□□□ -0.96
USP25-206ENST00000453553 NCOA4Q13772 614 aa9.06□□□□□ -0.96
USP25-206ENST00000453553 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
USP25-206ENST00000453553 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
USP25-206ENST00000453553 EMILIN1Q9Y6C2 1016 aa9.06□□□□□ -0.96
USP25-206ENST00000453553 SRPK2P78362 688 aaKnown RBP9.05□□□□□ -0.96
USP25-206ENST00000453553 EML3Q32P44 896 aa9.05□□□□□ -0.96
USP25-206ENST00000453553 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
USP25-206ENST00000453553 SIRT1Q96EB6 747 aa9.05□□□□□ -0.96
USP25-206ENST00000453553 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
USP25-206ENST00000453553 PGPEP1Q9NXJ5 209 aa9.05□□□□□ -0.96
USP25-206ENST00000453553 KLF16Q9BXK1 252 aaPredicted RBP9.04□□□□□ -0.96
USP25-206ENST00000453553 VRTNQ9H8Y1 702 aa9.04□□□□□ -0.96
USP25-206ENST00000453553 ERVK-9P63128 1117 aa9.03□□□□□ -0.96
USP25-206ENST00000453553 KANK4Q5T7N3 995 aaPredicted RBP9.03□□□□□ -0.96
USP25-206ENST00000453553 CC2D2BQ6DHV5 1058 aa9.03□□□□□ -0.96
USP25-206ENST00000453553 ZNF784Q8NCA9 323 aaPredicted RBP9.03□□□□□ -0.96
USP25-206ENST00000453553 MKRN1Q9UHC7 482 aaKnown RBP9.03□□□□□ -0.96
USP25-206ENST00000453553 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
USP25-206ENST00000453553 LILRA1O75019 489 aa9.02□□□□□ -0.97
USP25-206ENST00000453553 PPP1R15AO75807 674 aaPredicted RBP9.02□□□□□ -0.97
USP25-206ENST00000453553 MYCP01106 439 aaPredicted RBP9.02□□□□□ -0.97
USP25-206ENST00000453553 SCTRP47872 440 aa9.02□□□□□ -0.97
USP25-206ENST00000453553 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
USP25-206ENST00000453553 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
USP25-206ENST00000453553 ESF1Q9H501 851 aaKnown RBP9.02□□□□□ -0.97
USP25-206ENST00000453553 CYLDQ9NQC7 956 aa9.02□□□□□ -0.97
USP25-206ENST00000453553 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
USP25-206ENST00000453553 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
USP25-206ENST00000453553 ZIC2O95409 532 aaPredicted RBP9.01□□□□□ -0.97
USP25-206ENST00000453553 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
USP25-206ENST00000453553 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
USP25-206ENST00000453553 CDCA8Q53HL2 280 aa9.01□□□□□ -0.97
USP25-206ENST00000453553 ITPKCQ96DU7 683 aa9.01□□□□□ -0.97
USP25-206ENST00000453553 TIMP2P16035 220 aa9□□□□□ -0.97
USP25-206ENST00000453553 TRIM50Q86XT4 487 aa9□□□□□ -0.97
USP25-206ENST00000453553 KIFC2Q96AC6 838 aa9□□□□□ -0.97
USP25-206ENST00000453553 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
USP25-206ENST00000453553 OSBPL3Q9H4L5 887 aa8.99□□□□□ -0.97
USP25-206ENST00000453553 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
USP25-206ENST00000453553 ZBTB7BO15156 539 aaPredicted RBP8.98□□□□□ -0.97
USP25-206ENST00000453553 Q6ZVU0 165 aa8.98□□□□□ -0.97
USP25-206ENST00000453553 PCDHGA11Q9Y5H2 935 aa8.98□□□□□ -0.97
USP25-206ENST00000453553 CAPN5O15484 640 aaPredicted RBP8.97□□□□□ -0.97
USP25-206ENST00000453553 RASA1P20936 1047 aa8.97□□□□□ -0.97
USP25-206ENST00000453553 ATP1A2P50993 1020 aa8.97□□□□□ -0.97
USP25-206ENST00000453553 GTF2IP78347 998 aa8.97□□□□□ -0.97
USP25-206ENST00000453553 CBLBQ13191 982 aa8.97□□□□□ -0.97
USP25-206ENST00000453553 LARP1Q6PKG0 1096 aaKnown RBP8.97□□□□□ -0.97
USP25-206ENST00000453553 OGFOD1Q8N543 542 aa8.97□□□□□ -0.97
USP25-206ENST00000453553 ATG7O95352 703 aa8.96□□□□□ -0.98
USP25-206ENST00000453553 GMPRP36959 345 aa8.96□□□□□ -0.98
USP25-206ENST00000453553 CLDN10P78369 228 aa8.96□□□□□ -0.98
USP25-206ENST00000453553 LARGE2Q8N3Y3 721 aa8.96□□□□□ -0.98
USP25-206ENST00000453553 DNAAF2Q9NVR5 837 aaKnown RBP8.96□□□□□ -0.98
USP25-206ENST00000453553 FAM196BA6NMK8 535 aa8.95□□□□□ -0.98
USP25-206ENST00000453553 CYP2U1Q7Z449 544 aa8.95□□□□□ -0.98
USP25-206ENST00000453553 NXF1Q9UBU9 619 aaKnown RBP8.95□□□□□ -0.98
USP25-206ENST00000453553 LOC100996750A0A140TA64 210 aa8.94□□□□□ -0.98
USP25-206ENST00000453553 ADH1AP07327 375 aa8.94□□□□□ -0.98
USP25-206ENST00000453553 PTK7Q13308 1070 aa8.94□□□□□ -0.98
USP25-206ENST00000453553 CRTC2Q53ET0 693 aaPredicted RBP8.94□□□□□ -0.98
USP25-206ENST00000453553 TRIM46Q7Z4K8 759 aa8.94□□□□□ -0.98
USP25-206ENST00000453553 KRTAP4-6Q9BYQ5 205 aa8.94□□□□□ -0.98
USP25-206ENST00000453553 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L10C9JJH3 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L21D6R901 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 GNRH1P01148 92 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 ELOAQ14241 798 aaKnown RBP8.93□□□□□ -0.98
USP25-206ENST00000453553 KDF1Q8NAX2 398 aaPredicted RBP8.93□□□□□ -0.98
USP25-206ENST00000453553 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 KIAA1024Q9UPX6 916 aa8.93□□□□□ -0.98
USP25-206ENST00000453553 BMP1P13497 986 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 PTGIRP43119 386 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 VEGFBP49765 207 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 PSME1Q06323 249 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 CCDC102BQ68D86 513 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 MEIOBQ8N635 442 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 AGBL1Q96MI9 1066 aa8.92□□□□□ -0.98
USP25-206ENST00000453553 DKK1O94907 266 aa8.91□□□□□ -0.98
USP25-206ENST00000453553 ANKMY2Q8IV38 441 aa8.91□□□□□ -0.98
USP25-206ENST00000453553 SIX5Q8N196 739 aa8.91□□□□□ -0.98
USP25-206ENST00000453553 ZSCAN1Q8NBB4 408 aa8.91□□□□□ -0.98
USP25-206ENST00000453553 ZNF594Q96JF6 807 aaPredicted RBP8.91□□□□□ -0.98
USP25-206ENST00000453553 RELBQ01201 579 aa8.9□□□□□ -0.98
USP25-206ENST00000453553 TPCN2Q8NHX9 752 aa8.9□□□□□ -0.98
USP25-206ENST00000453553 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
USP25-206ENST00000453553 ARXQ96QS3 562 aa8.9□□□□□ -0.98
USP25-206ENST00000453553 TSEN34Q9BSV6 310 aaKnown RBP8.9□□□□□ -0.98
USP25-206ENST00000453553 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms