RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
PTPA-224ENST00000453358 SYTL4Q96C24 671 aaPredicted RBP18.3■□□□□ 0.52
PTPA-224ENST00000453358 TUBGCP6Q96RT7 1819 aa18.3■□□□□ 0.52
PTPA-224ENST00000453358 COG3Q96JB2 828 aa18.29■□□□□ 0.52
PTPA-224ENST00000453358 DOT1LQ8TEK3 1739 aa18.29■□□□□ 0.52
PTPA-224ENST00000453358 SENP3-EIF4A1A0A087X0R7 540 aa18.28■□□□□ 0.52
PTPA-224ENST00000453358 FBLN1P23142 703 aa18.28■□□□□ 0.52
PTPA-224ENST00000453358 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
PTPA-224ENST00000453358 TESK2Q96S53 571 aa18.28■□□□□ 0.52
PTPA-224ENST00000453358 LY75O60449 1722 aa18.28■□□□□ 0.52
PTPA-224ENST00000453358 MEGF6O75095 1541 aa18.28■□□□□ 0.52
PTPA-224ENST00000453358 SHANK3Q9BYB0 1731 aa18.27■□□□□ 0.52
PTPA-224ENST00000453358 NLGN2Q8NFZ4 835 aa18.27■□□□□ 0.52
PTPA-224ENST00000453358 AMPHP49418 695 aa18.26■□□□□ 0.51
PTPA-224ENST00000453358 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
PTPA-224ENST00000453358 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
PTPA-224ENST00000453358 CCNL1Q9UK58 526 aaPredicted RBP18.25■□□□□ 0.51
PTPA-224ENST00000453358 TONSLQ96HA7 1378 aa18.24■□□□□ 0.51
PTPA-224ENST00000453358 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
PTPA-224ENST00000453358 ST20-MTHFSA0A0A6YYL1 179 aa18.23■□□□□ 0.51
PTPA-224ENST00000453358 NBPF6Q5VWK0 638 aa18.23■□□□□ 0.51
PTPA-224ENST00000453358 NBPF4Q96M43 638 aa18.23■□□□□ 0.51
PTPA-224ENST00000453358 COL23A1Q86Y22 540 aaPredicted RBP18.22■□□□□ 0.51
PTPA-224ENST00000453358 USP47Q96K76 1375 aa18.21■□□□□ 0.51
PTPA-224ENST00000453358 GIGYF1O75420 1035 aaPredicted RBP18.21■□□□□ 0.51
PTPA-224ENST00000453358 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
PTPA-224ENST00000453358 RRS1Q15050 365 aaKnown RBP18.21■□□□□ 0.51
PTPA-224ENST00000453358 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
PTPA-224ENST00000453358 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
PTPA-224ENST00000453358 MSH5O43196 834 aa18.19■□□□□ 0.5
PTPA-224ENST00000453358 FYB1O15117 783 aa18.18■□□□□ 0.5
PTPA-224ENST00000453358 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
PTPA-224ENST00000453358 SLC24A1O60721 1099 aa18.18■□□□□ 0.5
PTPA-224ENST00000453358 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
PTPA-224ENST00000453358 GGNBP2Q9H3C7 697 aa18.18■□□□□ 0.5
PTPA-224ENST00000453358 MSL1Q68DK7 614 aa18.17■□□□□ 0.5
PTPA-224ENST00000453358 SMG6Q86US8 1419 aaKnown RBP18.16■□□□□ 0.5
PTPA-224ENST00000453358 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
PTPA-224ENST00000453358 C5P01031 1676 aa18.15■□□□□ 0.5
PTPA-224ENST00000453358 INSRP06213 1382 aa18.15■□□□□ 0.5
PTPA-224ENST00000453358 HSP90AB2PQ58FF8 381 aa18.14■□□□□ 0.49
PTPA-224ENST00000453358 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
PTPA-224ENST00000453358 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
PTPA-224ENST00000453358 PALLDQ8WX93 1383 aa18.14■□□□□ 0.49
PTPA-224ENST00000453358 CD2APQ9Y5K6 639 aa18.13■□□□□ 0.49
PTPA-224ENST00000453358 CYP27B1O15528 508 aa18.12■□□□□ 0.49
PTPA-224ENST00000453358 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
PTPA-224ENST00000453358 FLT4P35916 1363 aa18.12■□□□□ 0.49
PTPA-224ENST00000453358 HMGB2P26583 209 aaKnown RBP18.11■□□□□ 0.49
PTPA-224ENST00000453358 MPRIPQ6WCQ1 1025 aa18.11■□□□□ 0.49
PTPA-224ENST00000453358 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
PTPA-224ENST00000453358 ATP10DQ9P241 1426 aa18.11■□□□□ 0.49
PTPA-224ENST00000453358 TAF1LQ8IZX4 1826 aa18.11■□□□□ 0.49
PTPA-224ENST00000453358 TMF1P82094 1093 aa18.1■□□□□ 0.49
PTPA-224ENST00000453358 AMIGO3Q86WK7 504 aa18.1■□□□□ 0.49
PTPA-224ENST00000453358 TOGARAM1Q9Y4F4 1720 aa18.09■□□□□ 0.49
PTPA-224ENST00000453358 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
PTPA-224ENST00000453358 KIF20BQ96Q89 1820 aa18.08■□□□□ 0.48
PTPA-224ENST00000453358 SMARCC1Q92922 1105 aaPredicted RBP18.08■□□□□ 0.48
PTPA-224ENST00000453358 AK7Q96M32 723 aa18.07■□□□□ 0.48
PTPA-224ENST00000453358 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 ADCY9O60503 1353 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 PIGBQ92521 554 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 ITGB4P16144 1822 aa18.06■□□□□ 0.48
PTPA-224ENST00000453358 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
PTPA-224ENST00000453358 CARD14Q9BXL6 1004 aa18.05■□□□□ 0.48
PTPA-224ENST00000453358 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
PTPA-224ENST00000453358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
PTPA-224ENST00000453358 GPBP1L1Q9HC44 474 aaPredicted RBP18.04■□□□□ 0.48
PTPA-224ENST00000453358 NSD3Q9BZ95 1437 aa18.04■□□□□ 0.48
PTPA-224ENST00000453358 PHF14O94880 888 aa18.03■□□□□ 0.48
PTPA-224ENST00000453358 CDCA8Q53HL2 280 aa18.03■□□□□ 0.48
PTPA-224ENST00000453358 MAP2P11137 1827 aaKnown RBP18.02■□□□□ 0.48
PTPA-224ENST00000453358 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.48
PTPA-224ENST00000453358 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
PTPA-224ENST00000453358 SIK1P57059 783 aa18.02■□□□□ 0.48
PTPA-224ENST00000453358 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
PTPA-224ENST00000453358 SSFA2P28290 1259 aa18.01■□□□□ 0.47
PTPA-224ENST00000453358 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
PTPA-224ENST00000453358 SPG7Q9UQ90 795 aa18.01■□□□□ 0.47
PTPA-224ENST00000453358 ZNF526Q8TF50 670 aaPredicted RBP18■□□□□ 0.47
PTPA-224ENST00000453358 WWC3Q9ULE0 1092 aa18■□□□□ 0.47
PTPA-224ENST00000453358 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
PTPA-224ENST00000453358 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
PTPA-224ENST00000453358 EYA1Q99502 592 aa17.99■□□□□ 0.47
PTPA-224ENST00000453358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.99■□□□□ 0.47
PTPA-224ENST00000453358 ASAP1Q9ULH1 1129 aa17.99■□□□□ 0.47
PTPA-224ENST00000453358 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
PTPA-224ENST00000453358 ITPK1Q13572 414 aa17.98■□□□□ 0.47
PTPA-224ENST00000453358 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
PTPA-224ENST00000453358 GNPATO15228 680 aa17.97■□□□□ 0.47
PTPA-224ENST00000453358 PHKG2P15735 406 aa17.96■□□□□ 0.47
PTPA-224ENST00000453358 HSPA6P17066 643 aa17.96■□□□□ 0.47
PTPA-224ENST00000453358 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
PTPA-224ENST00000453358 IFNL2Q8IZJ0 200 aa17.95■□□□□ 0.46
PTPA-224ENST00000453358 ATG3Q9NT62 314 aa17.95■□□□□ 0.46
PTPA-224ENST00000453358 POLKQ9UBT6 870 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms