RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 HSP90AB2PQ58FF8 381 aa25.51■■□□□ 1.67
PDLIM2-214ENST00000452226 USHBP1Q8N6Y0 703 aa25.51■■□□□ 1.67
PDLIM2-214ENST00000452226 INSRP06213 1382 aa25.5■■□□□ 1.67
PDLIM2-214ENST00000452226 EIF4G2P78344 907 aaKnown RBP eCLIP25.5■■□□□ 1.67
PDLIM2-214ENST00000452226 PAPPAQ13219 1627 aa25.5■■□□□ 1.67
PDLIM2-214ENST00000452226 DOT1LQ8TEK3 1739 aa25.5■■□□□ 1.67
PDLIM2-214ENST00000452226 SYTL4Q96C24 671 aaPredicted RBP25.5■■□□□ 1.67
PDLIM2-214ENST00000452226 ATF5Q9Y2D1 282 aaPredicted RBP25.5■■□□□ 1.67
PDLIM2-214ENST00000452226 FLT4P35916 1363 aa25.49■■□□□ 1.67
PDLIM2-214ENST00000452226 PRIM1P49642 420 aaKnown RBP25.49■■□□□ 1.67
PDLIM2-214ENST00000452226 LRRC4BQ9NT99 713 aa25.49■■□□□ 1.67
PDLIM2-214ENST00000452226 KIF24Q5T7B8 1368 aa25.48■■□□□ 1.67
PDLIM2-214ENST00000452226 HSPA5P11021 654 aaKnown RBP25.48■■□□□ 1.67
PDLIM2-214ENST00000452226 RAPGEF4Q8WZA2 1011 aa25.48■■□□□ 1.67
PDLIM2-214ENST00000452226 CGNL1Q0VF96 1302 aa25.47■■□□□ 1.67
PDLIM2-214ENST00000452226 PTGER2P43116 358 aa25.47■■□□□ 1.67
PDLIM2-214ENST00000452226 ZNF827Q17R98 1081 aa25.45■■□□□ 1.66
PDLIM2-214ENST00000452226 SLC27A3Q5K4L6 730 aa25.45■■□□□ 1.66
PDLIM2-214ENST00000452226 POLR3GLQ9BT43 218 aa25.45■■□□□ 1.66
PDLIM2-214ENST00000452226 MTFR1LQ9H019 292 aa25.45■■□□□ 1.66
PDLIM2-214ENST00000452226 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
PDLIM2-214ENST00000452226 TATP17735 454 aaPredicted RBP25.44■■□□□ 1.66
PDLIM2-214ENST00000452226 MAP2P11137 1827 aaKnown RBP25.43■■□□□ 1.66
PDLIM2-214ENST00000452226 NSD2O96028 1365 aa25.43■■□□□ 1.66
PDLIM2-214ENST00000452226 PPM1GO15355 546 aaPredicted RBP25.42■■□□□ 1.66
PDLIM2-214ENST00000452226 LY75O60449 1722 aa25.41■■□□□ 1.66
PDLIM2-214ENST00000452226 AKT1S1Q96B36 256 aa25.41■■□□□ 1.66
PDLIM2-214ENST00000452226 KCNQ4P56696 695 aa25.4■■□□□ 1.66
PDLIM2-214ENST00000452226 ANKRD26Q9UPS8 1709 aa25.4■■□□□ 1.66
PDLIM2-214ENST00000452226 PCDH11XQ9BZA7 1347 aa25.38■■□□□ 1.65
PDLIM2-214ENST00000452226 PCDH11YQ9BZA8 1340 aa25.38■■□□□ 1.65
PDLIM2-214ENST00000452226 SGIP1Q9BQI5 828 aa25.38■■□□□ 1.65
PDLIM2-214ENST00000452226 QSER1Q2KHR3 1735 aa25.37■■□□□ 1.65
PDLIM2-214ENST00000452226 SYT17Q9BSW7 474 aa25.37■■□□□ 1.65
PDLIM2-214ENST00000452226 FHDC1Q9C0D6 1143 aaPredicted RBP25.37■■□□□ 1.65
PDLIM2-214ENST00000452226 WASHC2AQ641Q2 1341 aa25.36■■□□□ 1.65
PDLIM2-214ENST00000452226 TUBGCP6Q96RT7 1819 aa25.35■■□□□ 1.65
PDLIM2-214ENST00000452226 CCNL1Q9UK58 526 aaPredicted RBP25.35■■□□□ 1.65
PDLIM2-214ENST00000452226 ARXQ96QS3 562 aa25.34■■□□□ 1.65
PDLIM2-214ENST00000452226 TFCP2L1Q9NZI6 479 aa25.34■■□□□ 1.65
PDLIM2-214ENST00000452226 CYP27B1O15528 508 aa25.33■■□□□ 1.65
PDLIM2-214ENST00000452226 PKD1L3Q7Z443 1732 aa25.33■■□□□ 1.65
PDLIM2-214ENST00000452226 POLKQ9UBT6 870 aa25.33■■□□□ 1.65
PDLIM2-214ENST00000452226 PNPLA7Q6ZV29 1317 aa25.33■■□□□ 1.64
PDLIM2-214ENST00000452226 NCAPD2Q15021 1401 aa25.32■■□□□ 1.64
PDLIM2-214ENST00000452226 SLC16A10Q8TF71 515 aa25.32■■□□□ 1.64
PDLIM2-214ENST00000452226 TNNT2P45379 298 aaPredicted RBP25.31■■□□□ 1.64
PDLIM2-214ENST00000452226 ITGB4P16144 1822 aa25.3■■□□□ 1.64
PDLIM2-214ENST00000452226 EYA1Q99502 592 aa25.3■■□□□ 1.64
PDLIM2-214ENST00000452226 PANK3Q9H999 370 aa25.3■■□□□ 1.64
PDLIM2-214ENST00000452226 MPRIPQ6WCQ1 1025 aa25.29■■□□□ 1.64
PDLIM2-214ENST00000452226 TOGARAM1Q9Y4F4 1720 aa25.29■■□□□ 1.64
PDLIM2-214ENST00000452226 POLD1P28340 1107 aa25.28■■□□□ 1.64
PDLIM2-214ENST00000452226 SPG7Q9UQ90 795 aa25.28■■□□□ 1.64
PDLIM2-214ENST00000452226 COL24A1Q17RW2 1714 aa25.26■■□□□ 1.63
PDLIM2-214ENST00000452226 HMGB2P26583 209 aaKnown RBP25.25■■□□□ 1.63
PDLIM2-214ENST00000452226 PALLDQ8WX93 1383 aa25.25■■□□□ 1.63
PDLIM2-214ENST00000452226 MAP3K5Q99683 1374 aa25.25■■□□□ 1.63
PDLIM2-214ENST00000452226 C5P01031 1676 aa25.25■■□□□ 1.63
PDLIM2-214ENST00000452226 EIF4A2Q14240 407 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-214ENST00000452226 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
PDLIM2-214ENST00000452226 TAF1LQ8IZX4 1826 aa25.23■■□□□ 1.63
PDLIM2-214ENST00000452226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.23■■□□□ 1.63
PDLIM2-214ENST00000452226 MSH5O43196 834 aa25.22■■□□□ 1.63
PDLIM2-214ENST00000452226 SMARCC1Q92922 1105 aaPredicted RBP25.22■■□□□ 1.63
PDLIM2-214ENST00000452226 COL23A1Q86Y22 540 aaPredicted RBP25.21■■□□□ 1.63
PDLIM2-214ENST00000452226 PIGBQ92521 554 aa25.21■■□□□ 1.63
PDLIM2-214ENST00000452226 GPR162Q16538 588 aa25.2■■□□□ 1.62
PDLIM2-214ENST00000452226 KLHL34Q8N239 644 aa25.2■■□□□ 1.62
PDLIM2-214ENST00000452226 ZNF784Q8NCA9 323 aaPredicted RBP25.2■■□□□ 1.62
PDLIM2-214ENST00000452226 KIF7Q2M1P5 1343 aa25.19■■□□□ 1.62
PDLIM2-214ENST00000452226 UTRNP46939 3433 aa25.19■■□□□ 1.62
PDLIM2-214ENST00000452226 IFNL2Q8IZJ0 200 aa25.18■■□□□ 1.62
PDLIM2-214ENST00000452226 PHKG2P15735 406 aa25.17■■□□□ 1.62
PDLIM2-214ENST00000452226 MORC1Q86VD1 984 aa25.17■■□□□ 1.62
PDLIM2-214ENST00000452226 CHD4Q14839 1912 aa25.17■■□□□ 1.62
PDLIM2-214ENST00000452226 IGSF1Q8N6C5 1336 aa25.16■■□□□ 1.62
PDLIM2-214ENST00000452226 TMOD3Q9NYL9 352 aa25.16■■□□□ 1.62
PDLIM2-214ENST00000452226 KNSTRNQ9Y448 316 aa25.16■■□□□ 1.62
PDLIM2-214ENST00000452226 C4BP0C0L5 1744 aa25.15■■□□□ 1.62
PDLIM2-214ENST00000452226 FLAD1Q8NFF5 587 aa25.14■■□□□ 1.62
PDLIM2-214ENST00000452226 MSL1Q68DK7 614 aa25.13■■□□□ 1.61
PDLIM2-214ENST00000452226 PLEKHG2Q9H7P9 1386 aa25.13■■□□□ 1.61
PDLIM2-214ENST00000452226 PELP1Q8IZL8 1130 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-214ENST00000452226 AK7Q96M32 723 aa25.12■■□□□ 1.61
PDLIM2-214ENST00000452226 LOC102724428A0A0B4J2F2 783 aa25.11■■□□□ 1.61
PDLIM2-214ENST00000452226 SIK1P57059 783 aa25.11■■□□□ 1.61
PDLIM2-214ENST00000452226 ASAP1Q9ULH1 1129 aa25.11■■□□□ 1.61
PDLIM2-214ENST00000452226 UBR3Q6ZT12 1888 aa25.11■■□□□ 1.61
PDLIM2-214ENST00000452226 PLEKHO1Q53GL0 409 aaPredicted RBP25.09■■□□□ 1.61
PDLIM2-214ENST00000452226 NLGN2Q8NFZ4 835 aa25.09■■□□□ 1.61
PDLIM2-214ENST00000452226 GOLGB1Q14789 3259 aaKnown RBP25.08■■□□□ 1.61
PDLIM2-214ENST00000452226 AMIGO3Q86WK7 504 aa25.07■■□□□ 1.6
PDLIM2-214ENST00000452226 LINC00116Q8NCU8 138 aa25.07■■□□□ 1.6
PDLIM2-214ENST00000452226 ATG3Q9NT62 314 aa25.07■■□□□ 1.6
PDLIM2-214ENST00000452226 PHF14O94880 888 aa25.06■■□□□ 1.6
PDLIM2-214ENST00000452226 HSP90AB1P08238 724 aaKnown RBP25.06■■□□□ 1.6
PDLIM2-214ENST00000452226 AMER1Q5JTC6 1135 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-214ENST00000452226 ZNF530Q6P9A1 599 aaPredicted RBP25.06■■□□□ 1.6
PDLIM2-214ENST00000452226 AEBP1Q8IUX7 1158 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms