RNA–Protein interactions for RNA: ENST00000450643.5

RHBDF1-206, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-206ENST00000450643 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
RHBDF1-206ENST00000450643 ONECUT3O60422 494 aaPredicted RBP22.73■■□□□ 1.23
RHBDF1-206ENST00000450643 CCDC184Q52MB2 194 aa22.73■■□□□ 1.23
RHBDF1-206ENST00000450643 SHANK3Q9BYB0 1731 aa22.73■■□□□ 1.23
RHBDF1-206ENST00000450643 KDRP35968 1356 aa22.73■■□□□ 1.23
RHBDF1-206ENST00000450643 EXOC5O00471 708 aa22.71■■□□□ 1.23
RHBDF1-206ENST00000450643 PDE3BQ13370 1112 aa22.71■■□□□ 1.23
RHBDF1-206ENST00000450643 MIER1Q8N108 512 aa22.69■■□□□ 1.22
RHBDF1-206ENST00000450643 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
RHBDF1-206ENST00000450643 KRT27Q7Z3Y8 459 aa22.68■■□□□ 1.22
RHBDF1-206ENST00000450643 ZCRB1Q8TBF4 217 aaKnown RBP22.68■■□□□ 1.22
RHBDF1-206ENST00000450643 SPG7Q9UQ90 795 aa22.67■■□□□ 1.22
RHBDF1-206ENST00000450643 NEFMP07197 916 aa22.66■■□□□ 1.22
RHBDF1-206ENST00000450643 DDX54Q8TDD1 881 aaKnown RBP22.66■■□□□ 1.22
RHBDF1-206ENST00000450643 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
RHBDF1-206ENST00000450643 PCDH11XQ9BZA7 1347 aa22.65■■□□□ 1.22
RHBDF1-206ENST00000450643 PCDH11YQ9BZA8 1340 aa22.65■■□□□ 1.22
RHBDF1-206ENST00000450643 FCHSD2O94868 740 aa22.65■■□□□ 1.22
RHBDF1-206ENST00000450643 PLEKHO1Q53GL0 409 aaPredicted RBP22.65■■□□□ 1.22
RHBDF1-206ENST00000450643 PLEKHG2Q9H7P9 1386 aa22.64■■□□□ 1.22
RHBDF1-206ENST00000450643 CCER2I3L3R5 266 aa22.64■■□□□ 1.21
RHBDF1-206ENST00000450643 AMOTQ4VCS5 1084 aa22.63■■□□□ 1.21
RHBDF1-206ENST00000450643 FAM182BQ5T319 152 aa22.63■■□□□ 1.21
RHBDF1-206ENST00000450643 ZNF530Q6P9A1 599 aaPredicted RBP22.63■■□□□ 1.21
RHBDF1-206ENST00000450643 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
RHBDF1-206ENST00000450643 KAT6BQ8WYB5 2073 aa22.62■■□□□ 1.21
RHBDF1-206ENST00000450643 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
RHBDF1-206ENST00000450643 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
RHBDF1-206ENST00000450643 MARCH10Q8NA82 808 aaPredicted RBP22.61■■□□□ 1.21
RHBDF1-206ENST00000450643 DOT1LQ8TEK3 1739 aa22.61■■□□□ 1.21
RHBDF1-206ENST00000450643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.61■■□□□ 1.21
RHBDF1-206ENST00000450643 ADAMTS8Q9UP79 889 aa22.61■■□□□ 1.21
RHBDF1-206ENST00000450643 C1orf141Q5JVX7 400 aa22.6■■□□□ 1.21
RHBDF1-206ENST00000450643 ILDR2Q71H61 639 aa22.6■■□□□ 1.21
RHBDF1-206ENST00000450643 CCDC146Q8IYE0 955 aa22.6■■□□□ 1.21
RHBDF1-206ENST00000450643 FAM9BQ8IZU0 186 aa22.6■■□□□ 1.21
RHBDF1-206ENST00000450643 PNISRQ8TF01 805 aaKnown RBP22.6■■□□□ 1.21
RHBDF1-206ENST00000450643 DLG5Q8TDM6 1919 aa22.59■■□□□ 1.21
RHBDF1-206ENST00000450643 PHACTR3Q96KR7 559 aa22.58■■□□□ 1.21
RHBDF1-206ENST00000450643 SBF2Q86WG5 1849 aa22.58■■□□□ 1.21
RHBDF1-206ENST00000450643 CYP27B1O15528 508 aa22.57■■□□□ 1.2
RHBDF1-206ENST00000450643 MTHFSDQ2M296 383 aaKnown RBP22.57■■□□□ 1.2
RHBDF1-206ENST00000450643 IFNL2Q8IZJ0 200 aa22.57■■□□□ 1.2
RHBDF1-206ENST00000450643 GAS2L2Q8NHY3 880 aa22.57■■□□□ 1.2
RHBDF1-206ENST00000450643 PHKG2P15735 406 aa22.56■■□□□ 1.2
RHBDF1-206ENST00000450643 TOGARAM1Q9Y4F4 1720 aa22.55■■□□□ 1.2
RHBDF1-206ENST00000450643 FAM196AQ6ZSG2 479 aa22.55■■□□□ 1.2
RHBDF1-206ENST00000450643 PLEKHF1Q96S99 279 aa22.55■■□□□ 1.2
RHBDF1-206ENST00000450643 SCN11AQ9UI33 1791 aa22.54■■□□□ 1.2
RHBDF1-206ENST00000450643 RUNDC1Q96C34 613 aa22.54■■□□□ 1.2
RHBDF1-206ENST00000450643 NHSQ6T4R5 1651 aa22.54■■□□□ 1.2
RHBDF1-206ENST00000450643 ITGB4P16144 1822 aa22.52■■□□□ 1.2
RHBDF1-206ENST00000450643 MAP3K5Q99683 1374 aa22.52■■□□□ 1.2
RHBDF1-206ENST00000450643 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
RHBDF1-206ENST00000450643 AKAP4Q5JQC9 854 aa22.52■■□□□ 1.2
RHBDF1-206ENST00000450643 ACSBG1Q96GR2 724 aa22.52■■□□□ 1.2
RHBDF1-206ENST00000450643 NFE2L2Q16236 605 aa22.5■■□□□ 1.19
RHBDF1-206ENST00000450643 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
RHBDF1-206ENST00000450643 GNAT3A8MTJ3 354 aa22.49■■□□□ 1.19
RHBDF1-206ENST00000450643 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
RHBDF1-206ENST00000450643 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
RHBDF1-206ENST00000450643 BCL9O00512 1426 aa22.48■■□□□ 1.19
RHBDF1-206ENST00000450643 KDM6AO15550 1401 aaPredicted RBP22.48■■□□□ 1.19
RHBDF1-206ENST00000450643 TNS1Q9HBL0 1735 aaKnown RBP22.48■■□□□ 1.19
RHBDF1-206ENST00000450643 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
RHBDF1-206ENST00000450643 RTF1Q92541 710 aaKnown RBP22.48■■□□□ 1.19
RHBDF1-206ENST00000450643 DCAF5Q96JK2 942 aa22.48■■□□□ 1.19
RHBDF1-206ENST00000450643 BTAF1O14981 1849 aa22.47■■□□□ 1.19
RHBDF1-206ENST00000450643 TRIM37O94972 964 aa22.47■■□□□ 1.19
RHBDF1-206ENST00000450643 NKX1-1Q15270 411 aaPredicted RBP22.47■■□□□ 1.19
RHBDF1-206ENST00000450643 ADAMTS7Q9UKP4 1686 aa22.46■■□□□ 1.19
RHBDF1-206ENST00000450643 SENP3-EIF4A1A0A087X0R7 540 aa22.45■■□□□ 1.18
RHBDF1-206ENST00000450643 APAF1O14727 1248 aa22.45■■□□□ 1.18
RHBDF1-206ENST00000450643 TMPOP42166 694 aaKnown RBP22.45■■□□□ 1.18
RHBDF1-206ENST00000450643 EP400Q96L91 3159 aa22.44■■□□□ 1.18
RHBDF1-206ENST00000450643 PRIM1P49642 420 aaKnown RBP22.44■■□□□ 1.18
RHBDF1-206ENST00000450643 RIPK4P57078 832 aa22.44■■□□□ 1.18
RHBDF1-206ENST00000450643 RNMTO43148 476 aaKnown RBP22.43■■□□□ 1.18
RHBDF1-206ENST00000450643 KCNQ2O43526 872 aa22.43■■□□□ 1.18
RHBDF1-206ENST00000450643 SF3B2Q13435 895 aaKnown RBP22.43■■□□□ 1.18
RHBDF1-206ENST00000450643 CABP4P57796 275 aa22.42■■□□□ 1.18
RHBDF1-206ENST00000450643 LMOD3Q0VAK6 560 aa22.42■■□□□ 1.18
RHBDF1-206ENST00000450643 MCM10Q7L590 875 aa22.42■■□□□ 1.18
RHBDF1-206ENST00000450643 LGR6Q9HBX8 967 aa22.42■■□□□ 1.18
RHBDF1-206ENST00000450643 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
RHBDF1-206ENST00000450643 SIPA1L3O60292 1781 aaPredicted RBP22.41■■□□□ 1.18
RHBDF1-206ENST00000450643 TEFQ10587 303 aa22.41■■□□□ 1.18
RHBDF1-206ENST00000450643 DCTN1Q14203 1278 aa22.41■■□□□ 1.18
RHBDF1-206ENST00000450643 BCL11BQ9C0K0 894 aaPredicted RBP22.41■■□□□ 1.18
RHBDF1-206ENST00000450643 MRC1P22897 1456 aa22.41■■□□□ 1.18
RHBDF1-206ENST00000450643 ERVV-2B6SEH9 535 aa22.4■■□□□ 1.18
RHBDF1-206ENST00000450643 PTF1AQ7RTS3 328 aa22.4■■□□□ 1.18
RHBDF1-206ENST00000450643 HTATSF1O43719 755 aaKnown RBP22.39■■□□□ 1.17
RHBDF1-206ENST00000450643 IL17REQ8NFR9 667 aa22.39■■□□□ 1.17
RHBDF1-206ENST00000450643 SALL2Q9Y467 1007 aaPredicted RBP22.38■■□□□ 1.17
RHBDF1-206ENST00000450643 APBA3O96018 575 aa22.37■■□□□ 1.17
RHBDF1-206ENST00000450643 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
RHBDF1-206ENST00000450643 SLC52A2Q9HAB3 445 aa22.37■■□□□ 1.17
RHBDF1-206ENST00000450643 NFATC2IPQ8NCF5 419 aa22.36■■□□□ 1.17
RHBDF1-206ENST00000450643 PIGBQ92521 554 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms