RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 NHSQ6T4R5 1651 aa20.07■□□□□ 0.8
USP39-206ENST00000448971 KIF7Q2M1P5 1343 aa20.06■□□□□ 0.8
USP39-206ENST00000448971 FYB1O15117 783 aa20.06■□□□□ 0.8
USP39-206ENST00000448971 CARD14Q9BXL6 1004 aa20.06■□□□□ 0.8
USP39-206ENST00000448971 CGNL1Q0VF96 1302 aa20.05■□□□□ 0.8
USP39-206ENST00000448971 ANKRD24Q8TF21 1146 aa20.05■□□□□ 0.8
USP39-206ENST00000448971 LRRC4BQ9NT99 713 aa20.05■□□□□ 0.8
USP39-206ENST00000448971 ZNF784Q8NCA9 323 aaPredicted RBP20.04■□□□□ 0.8
USP39-206ENST00000448971 PAPPAQ13219 1627 aa20.03■□□□□ 0.8
USP39-206ENST00000448971 ZBTB22O15209 634 aa20.03■□□□□ 0.8
USP39-206ENST00000448971 BTAF1O14981 1849 aa20.02■□□□□ 0.8
USP39-206ENST00000448971 ZNF827Q17R98 1081 aa20.02■□□□□ 0.8
USP39-206ENST00000448971 ARXQ96QS3 562 aa20.02■□□□□ 0.8
USP39-206ENST00000448971 PANK3Q9H999 370 aa20.02■□□□□ 0.8
USP39-206ENST00000448971 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
USP39-206ENST00000448971 MAP3K19Q56UN5 1328 aa20.01■□□□□ 0.79
USP39-206ENST00000448971 GOLGB1Q14789 3259 aaKnown RBP20■□□□□ 0.79
USP39-206ENST00000448971 RTL1A6NKG5 1358 aa20■□□□□ 0.79
USP39-206ENST00000448971 AMPHP49418 695 aa20■□□□□ 0.79
USP39-206ENST00000448971 IP6K1Q92551 441 aa20■□□□□ 0.79
USP39-206ENST00000448971 RRS1Q15050 365 aaKnown RBP19.99■□□□□ 0.79
USP39-206ENST00000448971 AKT1S1Q96B36 256 aa19.99■□□□□ 0.79
USP39-206ENST00000448971 CHD4Q14839 1912 aa19.99■□□□□ 0.79
USP39-206ENST00000448971 MAP3K5Q99683 1374 aa19.98■□□□□ 0.79
USP39-206ENST00000448971 FBLN1P23142 703 aa19.98■□□□□ 0.79
USP39-206ENST00000448971 FAM208AQ9UK61 1670 aaKnown RBP19.97■□□□□ 0.79
USP39-206ENST00000448971 NSD2O96028 1365 aa19.96■□□□□ 0.79
USP39-206ENST00000448971 HOXC9P31274 260 aa19.96■□□□□ 0.79
USP39-206ENST00000448971 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
USP39-206ENST00000448971 SMG6Q86US8 1419 aaKnown RBP19.95■□□□□ 0.78
USP39-206ENST00000448971 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
USP39-206ENST00000448971 SLC16A10Q8TF71 515 aa19.95■□□□□ 0.78
USP39-206ENST00000448971 LTV1Q96GA3 475 aaPredicted RBP19.95■□□□□ 0.78
USP39-206ENST00000448971 KNSTRNQ9Y448 316 aa19.95■□□□□ 0.78
USP39-206ENST00000448971 WASHC2AQ641Q2 1341 aa19.95■□□□□ 0.78
USP39-206ENST00000448971 FLT4P35916 1363 aa19.95■□□□□ 0.78
USP39-206ENST00000448971 PNPLA7Q6ZV29 1317 aa19.93■□□□□ 0.78
USP39-206ENST00000448971 PRIM1P49642 420 aaKnown RBP19.92■□□□□ 0.78
USP39-206ENST00000448971 KCNQ4P56696 695 aa19.92■□□□□ 0.78
USP39-206ENST00000448971 KIF24Q5T7B8 1368 aa19.92■□□□□ 0.78
USP39-206ENST00000448971 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
USP39-206ENST00000448971 EMILIN1Q9Y6C2 1016 aa19.91■□□□□ 0.78
USP39-206ENST00000448971 COL24A1Q17RW2 1714 aa19.9■□□□□ 0.78
USP39-206ENST00000448971 PPM1GO15355 546 aaPredicted RBP19.9■□□□□ 0.78
USP39-206ENST00000448971 QSER1Q2KHR3 1735 aa19.9■□□□□ 0.78
USP39-206ENST00000448971 INSRP06213 1382 aa19.88■□□□□ 0.77
USP39-206ENST00000448971 GPR162Q16538 588 aa19.88■□□□□ 0.77
USP39-206ENST00000448971 MORC1Q86VD1 984 aa19.88■□□□□ 0.77
USP39-206ENST00000448971 ZCRB1Q8TBF4 217 aaKnown RBP19.88■□□□□ 0.77
USP39-206ENST00000448971 SYTL4Q96C24 671 aaPredicted RBP19.88■□□□□ 0.77
USP39-206ENST00000448971 TFCP2L1Q9NZI6 479 aa19.88■□□□□ 0.77
USP39-206ENST00000448971 POLD1P28340 1107 aa19.87■□□□□ 0.77
USP39-206ENST00000448971 RGPD2P0DJD1 1756 aa19.86■□□□□ 0.77
USP39-206ENST00000448971 C1QTNF8P60827 252 aa19.86■□□□□ 0.77
USP39-206ENST00000448971 HSP90AB2PQ58FF8 381 aa19.86■□□□□ 0.77
USP39-206ENST00000448971 TUBGCP6Q96RT7 1819 aa19.86■□□□□ 0.77
USP39-206ENST00000448971 LY75O60449 1722 aa19.85■□□□□ 0.77
USP39-206ENST00000448971 NBPF6Q5VWK0 638 aa19.85■□□□□ 0.77
USP39-206ENST00000448971 NBPF4Q96M43 638 aa19.85■□□□□ 0.77
USP39-206ENST00000448971 SHANK3Q9BYB0 1731 aa19.85■□□□□ 0.77
USP39-206ENST00000448971 MAP2P11137 1827 aaKnown RBP19.84■□□□□ 0.77
USP39-206ENST00000448971 AMER1Q5JTC6 1135 aaPredicted RBP19.84■□□□□ 0.77
USP39-206ENST00000448971 MEGF6O75095 1541 aa19.84■□□□□ 0.77
USP39-206ENST00000448971 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.77
USP39-206ENST00000448971 NLGN2Q8NFZ4 835 aa19.83■□□□□ 0.77
USP39-206ENST00000448971 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
USP39-206ENST00000448971 DOT1LQ8TEK3 1739 aa19.82■□□□□ 0.76
USP39-206ENST00000448971 CNGB1Q14028 1251 aaPredicted RBP19.82■□□□□ 0.76
USP39-206ENST00000448971 CC2D1BQ5T0F9 858 aaKnown RBP19.82■□□□□ 0.76
USP39-206ENST00000448971 KLHL34Q8N239 644 aa19.82■□□□□ 0.76
USP39-206ENST00000448971 USHBP1Q8N6Y0 703 aa19.82■□□□□ 0.76
USP39-206ENST00000448971 CCNL1Q9UK58 526 aaPredicted RBP19.82■□□□□ 0.76
USP39-206ENST00000448971 COL23A1Q86Y22 540 aaPredicted RBP19.81■□□□□ 0.76
USP39-206ENST00000448971 PER1O15534 1290 aaPredicted RBP19.8■□□□□ 0.76
USP39-206ENST00000448971 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
USP39-206ENST00000448971 CEP350Q5VT06 3117 aa19.78■□□□□ 0.76
USP39-206ENST00000448971 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
USP39-206ENST00000448971 YBX3P16989 372 aaKnown RBP eCLIP19.77■□□□□ 0.76
USP39-206ENST00000448971 RAPGEF4Q8WZA2 1011 aa19.77■□□□□ 0.76
USP39-206ENST00000448971 NPC1L1Q9UHC9 1359 aa19.77■□□□□ 0.76
USP39-206ENST00000448971 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
USP39-206ENST00000448971 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
USP39-206ENST00000448971 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
USP39-206ENST00000448971 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
USP39-206ENST00000448971 NCAPD2Q15021 1401 aa19.73■□□□□ 0.75
USP39-206ENST00000448971 CYP27B1O15528 508 aa19.72■□□□□ 0.75
USP39-206ENST00000448971 GIGYF1O75420 1035 aaPredicted RBP19.72■□□□□ 0.75
USP39-206ENST00000448971 MSL1Q68DK7 614 aa19.72■□□□□ 0.75
USP39-206ENST00000448971 EYA1Q99502 592 aa19.71■□□□□ 0.75
USP39-206ENST00000448971 PCDH11XQ9BZA7 1347 aa19.71■□□□□ 0.75
USP39-206ENST00000448971 PCDH11YQ9BZA8 1340 aa19.71■□□□□ 0.75
USP39-206ENST00000448971 MPRIPQ6WCQ1 1025 aa19.7■□□□□ 0.74
USP39-206ENST00000448971 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
USP39-206ENST00000448971 CD2APQ9Y5K6 639 aa19.7■□□□□ 0.74
USP39-206ENST00000448971 TAF1LQ8IZX4 1826 aa19.69■□□□□ 0.74
USP39-206ENST00000448971 PKD1L3Q7Z443 1732 aa19.69■□□□□ 0.74
USP39-206ENST00000448971 HMGB2P26583 209 aaKnown RBP19.69■□□□□ 0.74
USP39-206ENST00000448971 AMIGO3Q86WK7 504 aa19.69■□□□□ 0.74
USP39-206ENST00000448971 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
USP39-206ENST00000448971 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms