RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 CCDC146Q8IYE0 955 aa15.8■□□□□ 0.12
RCL1-208ENST00000448872 RAPGEF4Q8WZA2 1011 aa15.8■□□□□ 0.12
RCL1-208ENST00000448872 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
RCL1-208ENST00000448872 RGPD1P0DJD0 1748 aa15.79■□□□□ 0.12
RCL1-208ENST00000448872 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
RCL1-208ENST00000448872 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
RCL1-208ENST00000448872 FAM208AQ9UK61 1670 aaKnown RBP15.79■□□□□ 0.12
RCL1-208ENST00000448872 ONECUT3O60422 494 aaPredicted RBP15.78■□□□□ 0.12
RCL1-208ENST00000448872 FCHSD2O94868 740 aa15.78■□□□□ 0.12
RCL1-208ENST00000448872 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
RCL1-208ENST00000448872 SEPT12Q8IYM1 358 aa15.78■□□□□ 0.12
RCL1-208ENST00000448872 PLEKHF1Q96S99 279 aa15.78■□□□□ 0.12
RCL1-208ENST00000448872 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
RCL1-208ENST00000448872 RGPD2P0DJD1 1756 aa15.77■□□□□ 0.11
RCL1-208ENST00000448872 OVOS2A0A0G2JMS6 1433 aa15.76■□□□□ 0.11
RCL1-208ENST00000448872 DDB1Q16531 1140 aa15.75■□□□□ 0.11
RCL1-208ENST00000448872 MTHFSDQ2M296 383 aaKnown RBP15.75■□□□□ 0.11
RCL1-208ENST00000448872 ZCRB1Q8TBF4 217 aaKnown RBP15.75■□□□□ 0.11
RCL1-208ENST00000448872 CDCA7Q9BWT1 371 aaPredicted RBP15.75■□□□□ 0.11
RCL1-208ENST00000448872 RGS12O14924 1447 aa15.75■□□□□ 0.11
RCL1-208ENST00000448872 EXOC5O00471 708 aa15.74■□□□□ 0.11
RCL1-208ENST00000448872 DDX54Q8TDD1 881 aaKnown RBP15.74■□□□□ 0.11
RCL1-208ENST00000448872 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
RCL1-208ENST00000448872 CYP27B1O15528 508 aa15.72■□□□□ 0.11
RCL1-208ENST00000448872 PLEKHO1Q53GL0 409 aaPredicted RBP15.72■□□□□ 0.11
RCL1-208ENST00000448872 RUNDC1Q96C34 613 aa15.72■□□□□ 0.11
RCL1-208ENST00000448872 SPG7Q9UQ90 795 aa15.72■□□□□ 0.11
RCL1-208ENST00000448872 TNS2Q63HR2 1409 aa15.72■□□□□ 0.11
RCL1-208ENST00000448872 AMOTQ4VCS5 1084 aa15.71■□□□□ 0.11
RCL1-208ENST00000448872 ZNF530Q6P9A1 599 aaPredicted RBP15.71■□□□□ 0.11
RCL1-208ENST00000448872 MARCH10Q8NA82 808 aaPredicted RBP15.71■□□□□ 0.11
RCL1-208ENST00000448872 RRP7AQ9Y3A4 280 aaKnown RBP15.71■□□□□ 0.11
RCL1-208ENST00000448872 THSD7AQ9UPZ6 1657 aa15.71■□□□□ 0.11
RCL1-208ENST00000448872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.71■□□□□ 0.13e-6■■□□□ 11.9
RCL1-208ENST00000448872 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
RCL1-208ENST00000448872 APAF1O14727 1248 aa15.7■□□□□ 0.1
RCL1-208ENST00000448872 PHKG2P15735 406 aa15.7■□□□□ 0.1
RCL1-208ENST00000448872 PDE3BQ13370 1112 aa15.7■□□□□ 0.1
RCL1-208ENST00000448872 PNNQ9H307 717 aaKnown RBP15.7■□□□□ 0.1
RCL1-208ENST00000448872 KRT27Q7Z3Y8 459 aa15.69■□□□□ 0.1
RCL1-208ENST00000448872 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
RCL1-208ENST00000448872 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
RCL1-208ENST00000448872 LRRC37A3O60309 1634 aa15.69■□□□□ 0.1
RCL1-208ENST00000448872 NEUROD2Q15784 382 aa15.68■□□□□ 0.1
RCL1-208ENST00000448872 GAS2L2Q8NHY3 880 aa15.68■□□□□ 0.1
RCL1-208ENST00000448872 NEFMP07197 916 aa15.67■□□□□ 0.1
RCL1-208ENST00000448872 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
RCL1-208ENST00000448872 NFE2L2Q16236 605 aa15.67■□□□□ 0.1
RCL1-208ENST00000448872 IFNL2Q8IZJ0 200 aa15.67■□□□□ 0.1
RCL1-208ENST00000448872 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
RCL1-208ENST00000448872 ZBTB22O15209 634 aa15.66■□□□□ 0.1
RCL1-208ENST00000448872 C1orf141Q5JVX7 400 aa15.66■□□□□ 0.1
RCL1-208ENST00000448872 MPRIPQ6WCQ1 1025 aa15.66■□□□□ 0.1
RCL1-208ENST00000448872 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
RCL1-208ENST00000448872 PLEKHG2Q9H7P9 1386 aa15.66■□□□□ 0.1
RCL1-208ENST00000448872 RIPK4P57078 832 aa15.65■□□□□ 0.1
RCL1-208ENST00000448872 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
RCL1-208ENST00000448872 AKAP4Q5JQC9 854 aa15.65■□□□□ 0.1
RCL1-208ENST00000448872 LGR6Q9HBX8 967 aa15.65■□□□□ 0.1
RCL1-208ENST00000448872 PARP4Q9UKK3 1724 aaKnown RBP15.65■□□□□ 0.1
RCL1-208ENST00000448872 MAP3K5Q99683 1374 aa15.65■□□□□ 0.1
RCL1-208ENST00000448872 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
RCL1-208ENST00000448872 WNK3Q9BYP7 1800 aa15.64■□□□□ 0.09
RCL1-208ENST00000448872 GNAT3A8MTJ3 354 aa15.64■□□□□ 0.09
RCL1-208ENST00000448872 NKX1-1Q15270 411 aaPredicted RBP15.64■□□□□ 0.09
RCL1-208ENST00000448872 MCM10Q7L590 875 aa15.64■□□□□ 0.09
RCL1-208ENST00000448872 IL17REQ8NFR9 667 aa15.64■□□□□ 0.09
RCL1-208ENST00000448872 ACSBG1Q96GR2 724 aa15.64■□□□□ 0.09
RCL1-208ENST00000448872 KDM6AO15550 1401 aaPredicted RBP15.63■□□□□ 0.09
RCL1-208ENST00000448872 ILDR2Q71H61 639 aa15.63■□□□□ 0.09
RCL1-208ENST00000448872 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
RCL1-208ENST00000448872 PKD1L3Q7Z443 1732 aa15.62■□□□□ 0.09
RCL1-208ENST00000448872 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
RCL1-208ENST00000448872 RNMTO43148 476 aaKnown RBP15.61■□□□□ 0.09
RCL1-208ENST00000448872 KCNQ2O43526 872 aa15.61■□□□□ 0.09
RCL1-208ENST00000448872 DCAF5Q96JK2 942 aa15.61■□□□□ 0.09
RCL1-208ENST00000448872 EP400Q96L91 3159 aa15.61■□□□□ 0.09
RCL1-208ENST00000448872 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
RCL1-208ENST00000448872 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
RCL1-208ENST00000448872 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
RCL1-208ENST00000448872 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
RCL1-208ENST00000448872 SYTL4Q96C24 671 aaPredicted RBP15.59■□□□□ 0.09
RCL1-208ENST00000448872 FAM196AQ6ZSG2 479 aa15.59■□□□□ 0.09
RCL1-208ENST00000448872 HTATSF1O43719 755 aaKnown RBP15.58■□□□□ 0.08
RCL1-208ENST00000448872 TRIM37O94972 964 aa15.58■□□□□ 0.08
RCL1-208ENST00000448872 HNRNPUQ00839 825 aaKnown RBP eCLIP15.58■□□□□ 0.08
RCL1-208ENST00000448872 CEMIPQ8WUJ3 1361 aa15.57■□□□□ 0.08
RCL1-208ENST00000448872 BCL9O00512 1426 aa15.57■□□□□ 0.08
RCL1-208ENST00000448872 CABP4P57796 275 aa15.57■□□□□ 0.08
RCL1-208ENST00000448872 WWC1Q8IX03 1113 aa15.57■□□□□ 0.08
RCL1-208ENST00000448872 NFATC2IPQ8NCF5 419 aa15.57■□□□□ 0.08
RCL1-208ENST00000448872 ERVV-2B6SEH9 535 aa15.56■□□□□ 0.08
RCL1-208ENST00000448872 LMOD3Q0VAK6 560 aa15.56■□□□□ 0.08
RCL1-208ENST00000448872 PIGBQ92521 554 aa15.56■□□□□ 0.08
RCL1-208ENST00000448872 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
RCL1-208ENST00000448872 SLC52A2Q9HAB3 445 aa15.56■□□□□ 0.08
RCL1-208ENST00000448872 CCDC27Q2M243 656 aa15.55■□□□□ 0.08
RCL1-208ENST00000448872 MIS18AQ9NYP9 233 aa15.55■□□□□ 0.08
RCL1-208ENST00000448872 BRWD3Q6RI45 1802 aa15.55■□□□□ 0.08
RCL1-208ENST00000448872 TEFQ10587 303 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms