RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 FYB1O15117 783 aa10.51□□□□□ -0.73
CPSF7-206ENST00000448745 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
CPSF7-206ENST00000448745 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
CPSF7-206ENST00000448745 PIK3C2AO00443 1686 aa10.51□□□□□ -0.73
CPSF7-206ENST00000448745 KIF20BQ96Q89 1820 aa10.51□□□□□ -0.73
CPSF7-206ENST00000448745 SOS2Q07890 1332 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-206ENST00000448745 TTC21BQ7Z4L5 1316 aa10.51□□□□□ -0.73
CPSF7-206ENST00000448745 USP54Q70EL1 1684 aa10.5□□□□□ -0.73
CPSF7-206ENST00000448745 ALS2Q96Q42 1657 aa10.5□□□□□ -0.73
CPSF7-206ENST00000448745 IPO8O15397 1037 aaKnown RBP10.5□□□□□ -0.73
CPSF7-206ENST00000448745 HSP90AA2PQ14568 343 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-206ENST00000448745 ATF7IPQ6VMQ6 1270 aa10.5□□□□□ -0.73
CPSF7-206ENST00000448745 ITPRIPQ8IWB1 547 aa10.5□□□□□ -0.73
CPSF7-206ENST00000448745 AHDC1Q5TGY3 1603 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-206ENST00000448745 U2AF1L5P0DN76 240 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-206ENST00000448745 U2AF1Q01081 240 aaKnown RBP eCLIP10.5□□□□□ -0.73
CPSF7-206ENST00000448745 XPCQ01831 940 aaPredicted RBP10.5□□□□□ -0.73
CPSF7-206ENST00000448745 RAB3GAP1Q15042 981 aa10.5□□□□□ -0.73
CPSF7-206ENST00000448745 COL3A1P02461 1466 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-206ENST00000448745 NPHP3Q7Z494 1330 aa10.49□□□□□ -0.73
CPSF7-206ENST00000448745 TOM1O60784 492 aa10.49□□□□□ -0.73
CPSF7-206ENST00000448745 TRIM27P14373 513 aa10.49□□□□□ -0.73
CPSF7-206ENST00000448745 TNNT2P45379 298 aaPredicted RBP10.49□□□□□ -0.73
CPSF7-206ENST00000448745 NUCB1Q02818 461 aa10.49□□□□□ -0.73
CPSF7-206ENST00000448745 NME9Q86XW9 330 aa10.49□□□□□ -0.73
CPSF7-206ENST00000448745 TNPO1Q92973 898 aaKnown RBP10.49□□□□□ -0.73
CPSF7-206ENST00000448745 ZRANB1Q9UGI0 708 aa10.49□□□□□ -0.73
CPSF7-206ENST00000448745 OVOS2A0A0J9YW53 1432 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 OVOS2Q6IE36 1432 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 GOLGA6L22H0YM25 854 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 EXOSC9Q06265 439 aaKnown RBP10.48□□□□□ -0.73
CPSF7-206ENST00000448745 PSME1Q06323 249 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 CCDC173Q0VFZ6 552 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.48□□□□□ -0.73
CPSF7-206ENST00000448745 IBTKQ9P2D0 1353 aaPredicted RBP10.48□□□□□ -0.73
CPSF7-206ENST00000448745 TTC21AQ8NDW8 1320 aa10.48□□□□□ -0.73
CPSF7-206ENST00000448745 BMP2KLQ5H9B9 411 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 SSH1Q8WYL5 1049 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 GGNBP2Q9H3C7 697 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 USP31Q70CQ4 1352 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
CPSF7-206ENST00000448745 ALDH1L2Q3SY69 923 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 ANP32BQ92688 251 aaKnown RBP10.47□□□□□ -0.73
CPSF7-206ENST00000448745 ZBTB40Q9NUA8 1239 aa10.47□□□□□ -0.73
CPSF7-206ENST00000448745 SPATA31A3Q5VYP0 1347 aa10.46□□□□□ -0.73
CPSF7-206ENST00000448745 CRYBG1Q9Y4K1 1723 aa10.46□□□□□ -0.73
CPSF7-206ENST00000448745 TMPOP42166 694 aaKnown RBP10.46□□□□□ -0.74
CPSF7-206ENST00000448745 CHD1LQ86WJ1 897 aa10.46□□□□□ -0.74
CPSF7-206ENST00000448745 TMEM57Q8N5G2 664 aa10.46□□□□□ -0.74
CPSF7-206ENST00000448745 CNKSR2Q8WXI2 1034 aa10.46□□□□□ -0.74
CPSF7-206ENST00000448745 ZNF428Q96B54 188 aa10.46□□□□□ -0.74
CPSF7-206ENST00000448745 NOB1Q9ULX3 412 aaKnown RBP10.46□□□□□ -0.74
CPSF7-206ENST00000448745 TNS3Q68CZ2 1445 aa10.46□□□□□ -0.74
CPSF7-206ENST00000448745 TSR2Q969E8 191 aaKnown RBP10.45□□□□□ -0.74
CPSF7-206ENST00000448745 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
CPSF7-206ENST00000448745 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
CPSF7-206ENST00000448745 K7ELQ4 463 aaPredicted RBP10.44□□□□□ -0.74
CPSF7-206ENST00000448745 PIP4K2BP78356 416 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 PKNOX2Q96KN3 472 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 PLEKHF1Q96S99 279 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 PPP1R9BQ96SB3 815 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 PHLPP1O60346 1717 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 BRPF1P55201 1214 aaPredicted RBP10.44□□□□□ -0.74
CPSF7-206ENST00000448745 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 TRIM35Q9UPQ4 493 aa10.44□□□□□ -0.74
CPSF7-206ENST00000448745 ERBB4Q15303 1308 aa10.43□□□□□ -0.74
CPSF7-206ENST00000448745 SLIT3O75094 1523 aa10.43□□□□□ -0.74
CPSF7-206ENST00000448745 FBLN1P23142 703 aa10.43□□□□□ -0.74
CPSF7-206ENST00000448745 NUTM2GQ5VZR2 741 aa10.43□□□□□ -0.74
CPSF7-206ENST00000448745 MAP2P11137 1827 aaKnown RBP10.43□□□□□ -0.74
CPSF7-206ENST00000448745 NFAT5O94916 1531 aa10.43□□□□□ -0.74
CPSF7-206ENST00000448745 TERF1P54274 439 aa10.42□□□□□ -0.74
CPSF7-206ENST00000448745 NLRP6P59044 892 aa10.42□□□□□ -0.74
CPSF7-206ENST00000448745 KLHL40Q2TBA0 621 aa10.42□□□□□ -0.74
CPSF7-206ENST00000448745 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
CPSF7-206ENST00000448745 LNPKQ9C0E8 428 aa10.42□□□□□ -0.74
CPSF7-206ENST00000448745 ABCA3Q99758 1704 aa10.42□□□□□ -0.74
CPSF7-206ENST00000448745 COL22A1Q8NFW1 1626 aaPredicted RBP10.42□□□□□ -0.74
CPSF7-206ENST00000448745 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
CPSF7-206ENST00000448745 NASPP49321 788 aaPredicted RBP10.41□□□□□ -0.74
CPSF7-206ENST00000448745 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.41□□□□□ -0.74
CPSF7-206ENST00000448745 GAS2L3Q86XJ1 694 aa10.41□□□□□ -0.74
CPSF7-206ENST00000448745 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
CPSF7-206ENST00000448745 PHRF1Q9P1Y6 1649 aaKnown RBP10.41□□□□□ -0.74
CPSF7-206ENST00000448745 CDC45O75419 566 aa10.41□□□□□ -0.74
CPSF7-206ENST00000448745 CALD1Q05682 793 aaKnown RBP10.41□□□□□ -0.74
CPSF7-206ENST00000448745 HS1BP3Q53T59 392 aa10.41□□□□□ -0.74
CPSF7-206ENST00000448745 ARHGAP45Q92619 1136 aa10.41□□□□□ -0.74
CPSF7-206ENST00000448745 COG3Q96JB2 828 aa10.41□□□□□ -0.74
CPSF7-206ENST00000448745 ARHGEF10O15013 1369 aa10.4□□□□□ -0.74
CPSF7-206ENST00000448745 PEAK1Q9H792 1746 aa10.4□□□□□ -0.74
CPSF7-206ENST00000448745 MSNP26038 577 aaKnown RBP10.4□□□□□ -0.74
CPSF7-206ENST00000448745 RIPK4P57078 832 aa10.4□□□□□ -0.74
CPSF7-206ENST00000448745 NUCB2P80303 420 aa10.4□□□□□ -0.74
CPSF7-206ENST00000448745 RABEP1Q15276 862 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms