RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SMARCA5O60264 1052 aaPredicted RBP18.63■□□□□ 0.57
SF1-211ENST00000448404 ESCO1Q5FWF5 840 aa18.63■□□□□ 0.57
SF1-211ENST00000448404 TBC1D2Q9BYX2 928 aa18.63■□□□□ 0.57
SF1-211ENST00000448404 FER1L4A9Z1Z3 1794 aa18.62■□□□□ 0.57
SF1-211ENST00000448404 NRKQ7Z2Y5 1582 aa18.62■□□□□ 0.57
SF1-211ENST00000448404 ARHGAP23Q9P227 1491 aa18.62■□□□□ 0.57
SF1-211ENST00000448404 USP31Q70CQ4 1352 aa18.62■□□□□ 0.57
SF1-211ENST00000448404 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
SF1-211ENST00000448404 HOXC9P31274 260 aa18.61■□□□□ 0.57
SF1-211ENST00000448404 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
SF1-211ENST00000448404 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
SF1-211ENST00000448404 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
SF1-211ENST00000448404 C22orf23Q9BZE7 217 aa18.6■□□□□ 0.57
SF1-211ENST00000448404 SLIT1O75093 1534 aa18.6■□□□□ 0.57
SF1-211ENST00000448404 LRRC59Q96AG4 307 aaKnown RBP18.6■□□□□ 0.57
SF1-211ENST00000448404 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
SF1-211ENST00000448404 FLT4P35916 1363 aa18.6■□□□□ 0.57
SF1-211ENST00000448404 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
SF1-211ENST00000448404 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
SF1-211ENST00000448404 MSH6P52701 1360 aa18.58■□□□□ 0.57
SF1-211ENST00000448404 CRB1P82279 1406 aa18.58■□□□□ 0.57
SF1-211ENST00000448404 PHF8Q9UPP1 1060 aa18.58■□□□□ 0.56
SF1-211ENST00000448404 TTC21AQ8NDW8 1320 aa18.58■□□□□ 0.56
SF1-211ENST00000448404 ARHGAP45Q92619 1136 aa18.58■□□□□ 0.56
SF1-211ENST00000448404 API5Q9BZZ5 524 aaKnown RBP18.58■□□□□ 0.56
SF1-211ENST00000448404 SBNO1A3KN83 1393 aa18.58■□□□□ 0.56
SF1-211ENST00000448404 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
SF1-211ENST00000448404 PIK3R4Q99570 1358 aa18.57■□□□□ 0.56
SF1-211ENST00000448404 ANKLE2Q86XL3 938 aa18.56■□□□□ 0.56
SF1-211ENST00000448404 DDX17Q92841 729 aaKnown RBP18.56■□□□□ 0.56
SF1-211ENST00000448404 RGS12O14924 1447 aa18.56■□□□□ 0.56
SF1-211ENST00000448404 PIK3C2AO00443 1686 aa18.56■□□□□ 0.56
SF1-211ENST00000448404 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
SF1-211ENST00000448404 PSME1Q06323 249 aa18.55■□□□□ 0.56
SF1-211ENST00000448404 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
SF1-211ENST00000448404 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
SF1-211ENST00000448404 FOXD4L1Q9NU39 408 aa18.55■□□□□ 0.56
SF1-211ENST00000448404 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
SF1-211ENST00000448404 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
SF1-211ENST00000448404 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
SF1-211ENST00000448404 ANXA1P04083 346 aa18.54■□□□□ 0.56
SF1-211ENST00000448404 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
SF1-211ENST00000448404 KCNQ3O43525 872 aa18.53■□□□□ 0.56
SF1-211ENST00000448404 GSPT1P15170 499 aaKnown RBP18.53■□□□□ 0.56
SF1-211ENST00000448404 ARHGEF10O15013 1369 aa18.52■□□□□ 0.56
SF1-211ENST00000448404 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
SF1-211ENST00000448404 BECN1Q14457 450 aa18.51■□□□□ 0.55
SF1-211ENST00000448404 CEP85Q6P2H3 762 aa18.51■□□□□ 0.55
SF1-211ENST00000448404 TBC1D9Q6ZT07 1266 aa18.51■□□□□ 0.55
SF1-211ENST00000448404 ARXQ96QS3 562 aa18.51■□□□□ 0.55
SF1-211ENST00000448404 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
SF1-211ENST00000448404 CD2BP2O95400 341 aaKnown RBP18.51■□□□□ 0.55
SF1-211ENST00000448404 INTS3Q68E01 1043 aaKnown RBP18.51■□□□□ 0.55
SF1-211ENST00000448404 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
SF1-211ENST00000448404 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
SF1-211ENST00000448404 EXOC6BQ9Y2D4 811 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 KDRP35968 1356 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 PLEKHM2Q8IWE5 1019 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
SF1-211ENST00000448404 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
SF1-211ENST00000448404 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
SF1-211ENST00000448404 ATP10DQ9P241 1426 aa18.48■□□□□ 0.55
SF1-211ENST00000448404 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
SF1-211ENST00000448404 XRN1Q8IZH2 1706 aaKnown RBP18.47■□□□□ 0.55
SF1-211ENST00000448404 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
SF1-211ENST00000448404 BMP2KLQ5H9B9 411 aa18.47■□□□□ 0.55
SF1-211ENST00000448404 FLIIQ13045 1269 aa18.46■□□□□ 0.55
SF1-211ENST00000448404 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
SF1-211ENST00000448404 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
SF1-211ENST00000448404 AXIN2Q9Y2T1 843 aa18.46■□□□□ 0.55
SF1-211ENST00000448404 ZC3H6P61129 1189 aaKnown RBP18.45■□□□□ 0.54
SF1-211ENST00000448404 KIAA0232Q92628 1395 aa18.45■□□□□ 0.54
SF1-211ENST00000448404 PNMA6EA0A0J9YXQ4 647 aa18.44■□□□□ 0.54
SF1-211ENST00000448404 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
SF1-211ENST00000448404 STK31Q9BXU1 1019 aa18.44■□□□□ 0.54
SF1-211ENST00000448404 KIF2CQ99661 725 aa18.44■□□□□ 0.54
SF1-211ENST00000448404 GSE1Q14687 1217 aa18.43■□□□□ 0.54
SF1-211ENST00000448404 NWD1Q149M9 1564 aa18.43■□□□□ 0.54
SF1-211ENST00000448404 FMN2Q9NZ56 1722 aa18.43■□□□□ 0.54
SF1-211ENST00000448404 CABLES1Q8TDN4 633 aa18.42■□□□□ 0.54
SF1-211ENST00000448404 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
SF1-211ENST00000448404 GCP02774 474 aa18.42■□□□□ 0.54
SF1-211ENST00000448404 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
SF1-211ENST00000448404 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
SF1-211ENST00000448404 IP6K1Q92551 441 aa18.42■□□□□ 0.54
SF1-211ENST00000448404 BRPF3Q9ULD4 1205 aa18.42■□□□□ 0.54
SF1-211ENST00000448404 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
SF1-211ENST00000448404 GZF1Q9H116 711 aaPredicted RBP18.41■□□□□ 0.54
SF1-211ENST00000448404 PTPRCP08575 1304 aa18.41■□□□□ 0.54
SF1-211ENST00000448404 MARF1Q9Y4F3 1742 aaKnown RBP18.41■□□□□ 0.54
SF1-211ENST00000448404 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
SF1-211ENST00000448404 ZNF530Q6P9A1 599 aaPredicted RBP18.4■□□□□ 0.54
SF1-211ENST00000448404 LRRFIP2Q9Y608 721 aaKnown RBP18.4■□□□□ 0.54
SF1-211ENST00000448404 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
SF1-211ENST00000448404 CHMP4BQ9H444 224 aaKnown RBP18.4■□□□□ 0.54
SF1-211ENST00000448404 SDSP20132 328 aa18.39■□□□□ 0.53
SF1-211ENST00000448404 TTC22Q5TAA0 569 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms