RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 NEO1Q92859 1461 aa25.1■■□□□ 1.61
SMARCD2-203ENST00000448276 CWC22Q9HCG8 908 aaKnown RBP25.09■■□□□ 1.61
SMARCD2-203ENST00000448276 IFT57Q9NWB7 429 aa25.09■■□□□ 1.61
SMARCD2-203ENST00000448276 TERF1P54274 439 aa25.09■■□□□ 1.61
SMARCD2-203ENST00000448276 JARID2Q92833 1246 aaPredicted RBP25.09■■□□□ 1.61
SMARCD2-203ENST00000448276 CDK19Q9BWU1 502 aa25.08■■□□□ 1.61
SMARCD2-203ENST00000448276 IDI1Q13907 227 aa25.08■■□□□ 1.61
SMARCD2-203ENST00000448276 API5Q9BZZ5 524 aaKnown RBP25.08■■□□□ 1.61
SMARCD2-203ENST00000448276 ZNF853P0CG23 659 aa25.07■■□□□ 1.6
SMARCD2-203ENST00000448276 YEATS2Q9ULM3 1422 aa25.06■■□□□ 1.6
SMARCD2-203ENST00000448276 TPRNQ4KMQ1 711 aa25.06■■□□□ 1.6
SMARCD2-203ENST00000448276 ZRANB1Q9UGI0 708 aa25.05■■□□□ 1.6
SMARCD2-203ENST00000448276 TSHZ3Q63HK5 1081 aa25.05■■□□□ 1.6
SMARCD2-203ENST00000448276 NEK4P51957 841 aa25.04■■□□□ 1.6
SMARCD2-203ENST00000448276 ANKRD44Q8N8A2 993 aa25.04■■□□□ 1.6
SMARCD2-203ENST00000448276 PRDM4Q9UKN5 801 aa25.04■■□□□ 1.6
SMARCD2-203ENST00000448276 CEP85Q6P2H3 762 aa25.03■■□□□ 1.6
SMARCD2-203ENST00000448276 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
SMARCD2-203ENST00000448276 CASC1Q6TDU7 716 aa25.03■■□□□ 1.6
SMARCD2-203ENST00000448276 CFAP44Q96MT7 982 aa25.03■■□□□ 1.6
SMARCD2-203ENST00000448276 GDPD2Q9HCC8 539 aa25.03■■□□□ 1.6
SMARCD2-203ENST00000448276 CCDC39Q9UFE4 941 aa25.03■■□□□ 1.6
SMARCD2-203ENST00000448276 PTMAP06454 111 aaKnown RBP25.02■■□□□ 1.6
SMARCD2-203ENST00000448276 FAM69CQ0P6D2 419 aa25.02■■□□□ 1.6
SMARCD2-203ENST00000448276 PRDM10Q9NQV6 1147 aa25.02■■□□□ 1.6
SMARCD2-203ENST00000448276 TSC1Q92574 1164 aa25.02■■□□□ 1.6
SMARCD2-203ENST00000448276 TMX3Q96JJ7 454 aa25.02■■□□□ 1.6
SMARCD2-203ENST00000448276 MEIS3Q99687 375 aa25.01■■□□□ 1.59
SMARCD2-203ENST00000448276 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
SMARCD2-203ENST00000448276 ZNF830Q96NB3 372 aaPredicted RBP25.01■■□□□ 1.59
SMARCD2-203ENST00000448276 ATP10DQ9P241 1426 aa25■■□□□ 1.59
SMARCD2-203ENST00000448276 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
SMARCD2-203ENST00000448276 IL13P35225 146 aa24.99■■□□□ 1.59
SMARCD2-203ENST00000448276 ERC2O15083 957 aa24.99■■□□□ 1.59
SMARCD2-203ENST00000448276 REC8O95072 547 aa24.99■■□□□ 1.59
SMARCD2-203ENST00000448276 CSPP1Q1MSJ5 1256 aa24.99■■□□□ 1.59
SMARCD2-203ENST00000448276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.99■■□□□ 1.59
SMARCD2-203ENST00000448276 YTHDC2Q9H6S0 1430 aaKnown RBP24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 PTPRMP28827 1452 aa24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 SASS6Q6UVJ0 657 aa24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 ZFYVE9O95405 1425 aa24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 RRS1Q15050 365 aaKnown RBP24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 FBXO31Q5XUX0 539 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 ANKRD26Q9UPS8 1709 aa24.98■■□□□ 1.59
SMARCD2-203ENST00000448276 GADD45BO75293 160 aaPredicted RBP24.97■■□□□ 1.59
SMARCD2-203ENST00000448276 MAP7D2Q96T17 732 aa24.97■■□□□ 1.59
SMARCD2-203ENST00000448276 MSH6P52701 1360 aa24.97■■□□□ 1.59
SMARCD2-203ENST00000448276 DYNC1I1O14576 645 aa24.97■■□□□ 1.59
SMARCD2-203ENST00000448276 NME9Q86XW9 330 aa24.97■■□□□ 1.59
SMARCD2-203ENST00000448276 PALD1Q9ULE6 856 aa24.97■■□□□ 1.59
SMARCD2-203ENST00000448276 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
SMARCD2-203ENST00000448276 C17orf53Q8N3J3 647 aaPredicted RBP24.96■■□□□ 1.59
SMARCD2-203ENST00000448276 TSPY26PQ9H489 355 aa24.96■■□□□ 1.59
SMARCD2-203ENST00000448276 WAPLQ7Z5K2 1190 aa24.95■■□□□ 1.59
SMARCD2-203ENST00000448276 DNTTIP2Q5QJE6 756 aaKnown RBP24.95■■□□□ 1.58
SMARCD2-203ENST00000448276 MCM5P33992 734 aa24.94■■□□□ 1.58
SMARCD2-203ENST00000448276 RPAP2Q8IXW5 612 aaPredicted RBP24.94■■□□□ 1.58
SMARCD2-203ENST00000448276 SLC52A1Q9NWF4 448 aa24.94■■□□□ 1.58
SMARCD2-203ENST00000448276 FAM177BA6PVY3 158 aa24.94■■□□□ 1.58
SMARCD2-203ENST00000448276 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
SMARCD2-203ENST00000448276 RTL1A6NKG5 1358 aa24.93■■□□□ 1.58
SMARCD2-203ENST00000448276 BRD1O95696 1058 aa24.93■■□□□ 1.58
SMARCD2-203ENST00000448276 CDC42BPGQ6DT37 1551 aa24.93■■□□□ 1.58
SMARCD2-203ENST00000448276 MBD3O95983 291 aa24.92■■□□□ 1.58
SMARCD2-203ENST00000448276 RICTORQ6R327 1708 aa24.92■■□□□ 1.58
SMARCD2-203ENST00000448276 RGS12O14924 1447 aa24.91■■□□□ 1.58
SMARCD2-203ENST00000448276 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
SMARCD2-203ENST00000448276 PDE1AP54750 535 aa24.91■■□□□ 1.58
SMARCD2-203ENST00000448276 MCM10Q7L590 875 aa24.91■■□□□ 1.58
SMARCD2-203ENST00000448276 UPF3BQ9BZI7 483 aaKnown RBP24.91■■□□□ 1.58
SMARCD2-203ENST00000448276 SLC4A10Q6U841 1118 aa24.9■■□□□ 1.58
SMARCD2-203ENST00000448276 AEBP1Q8IUX7 1158 aa24.9■■□□□ 1.58
SMARCD2-203ENST00000448276 STAG3Q9UJ98 1225 aa24.9■■□□□ 1.58
SMARCD2-203ENST00000448276 EXOC6BQ9Y2D4 811 aa24.9■■□□□ 1.58
SMARCD2-203ENST00000448276 ARHGEF40Q8TER5 1519 aa24.9■■□□□ 1.58
SMARCD2-203ENST00000448276 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.58
SMARCD2-203ENST00000448276 F6X3S4 739 aa24.89■■□□□ 1.58
SMARCD2-203ENST00000448276 MIS18AQ9NYP9 233 aa24.89■■□□□ 1.57
SMARCD2-203ENST00000448276 USP25Q9UHP3 1055 aa24.89■■□□□ 1.57
SMARCD2-203ENST00000448276 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.88■■□□□ 1.57
SMARCD2-203ENST00000448276 TTC12Q9H892 705 aaPredicted RBP24.88■■□□□ 1.57
SMARCD2-203ENST00000448276 KIF20BQ96Q89 1820 aa24.88■■□□□ 1.57
SMARCD2-203ENST00000448276 NCKAP5LQ9HCH0 1330 aa24.88■■□□□ 1.57
SMARCD2-203ENST00000448276 KIF24Q5T7B8 1368 aa24.87■■□□□ 1.57
SMARCD2-203ENST00000448276 LMOD3Q0VAK6 560 aa24.87■■□□□ 1.57
SMARCD2-203ENST00000448276 MLECQ14165 292 aa24.87■■□□□ 1.57
SMARCD2-203ENST00000448276 USP48Q86UV5 1035 aa24.87■■□□□ 1.57
SMARCD2-203ENST00000448276 ANO2Q9NQ90 1003 aa24.87■■□□□ 1.57
SMARCD2-203ENST00000448276 PIK3C2BO00750 1634 aa24.86■■□□□ 1.57
SMARCD2-203ENST00000448276 RILPL2Q969X0 211 aa24.86■■□□□ 1.57
SMARCD2-203ENST00000448276 DTNBO60941 627 aa24.86■■□□□ 1.57
SMARCD2-203ENST00000448276 ZHX1Q9UKY1 873 aaPredicted RBP24.86■■□□□ 1.57
SMARCD2-203ENST00000448276 SLC4A2P04920 1241 aa24.85■■□□□ 1.57
SMARCD2-203ENST00000448276 ESYT1Q9BSJ8 1104 aa24.85■■□□□ 1.57
SMARCD2-203ENST00000448276 DLG5Q8TDM6 1919 aa24.85■■□□□ 1.57
SMARCD2-203ENST00000448276 G2E3Q7L622 706 aa24.85■■□□□ 1.57
SMARCD2-203ENST00000448276 CUL4AQ13619 759 aa24.84■■□□□ 1.57
SMARCD2-203ENST00000448276 TRIM6-TRIM34B2RNG4 842 aa24.84■■□□□ 1.57
SMARCD2-203ENST00000448276 LARP6Q9BRS8 491 aaKnown RBP24.83■■□□□ 1.57
SMARCD2-203ENST00000448276 ZNF710Q8N1W2 664 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms