RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 IL13P35225 146 aa17.58■□□□□ 0.4
ERGIC3-209ENST00000447986 LRRC37A3O60309 1634 aa17.57■□□□□ 0.4
ERGIC3-209ENST00000447986 SOCS7O14512 581 aa17.57■□□□□ 0.4
ERGIC3-209ENST00000447986 FKBP8Q14318 412 aa17.57■□□□□ 0.4
ERGIC3-209ENST00000447986 RGPD2P0DJD1 1756 aa17.57■□□□□ 0.4
ERGIC3-209ENST00000447986 TNS2Q63HR2 1409 aa17.56■□□□□ 0.4
ERGIC3-209ENST00000447986 BRWD3Q6RI45 1802 aa17.56■□□□□ 0.4
ERGIC3-209ENST00000447986 MYBBP1AQ9BQG0 1328 aaKnown RBP17.56■□□□□ 0.4
ERGIC3-209ENST00000447986 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
ERGIC3-209ENST00000447986 NCAPD2Q15021 1401 aa17.56■□□□□ 0.4
ERGIC3-209ENST00000447986 FAM196AQ6ZSG2 479 aa17.55■□□□□ 0.4
ERGIC3-209ENST00000447986 PRKRIP1Q9H875 184 aaPredicted RBP17.55■□□□□ 0.4
ERGIC3-209ENST00000447986 ZCRB1Q8TBF4 217 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-209ENST00000447986 OVOS2A0A0G2JMS6 1433 aa17.54■□□□□ 0.4
ERGIC3-209ENST00000447986 MEGF6O75095 1541 aa17.54■□□□□ 0.4
ERGIC3-209ENST00000447986 U2SURPO15042 1029 aaKnown RBP17.54■□□□□ 0.4
ERGIC3-209ENST00000447986 ANP32CO43423 234 aa17.53■□□□□ 0.4
ERGIC3-209ENST00000447986 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
ERGIC3-209ENST00000447986 SULT6B1Q6IMI4 303 aa17.53■□□□□ 0.4
ERGIC3-209ENST00000447986 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
ERGIC3-209ENST00000447986 COL3A1P02461 1466 aaPredicted RBP17.53■□□□□ 0.4
ERGIC3-209ENST00000447986 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
ERGIC3-209ENST00000447986 CCDC125Q86Z20 511 aa17.51■□□□□ 0.39
ERGIC3-209ENST00000447986 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-209ENST00000447986 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
ERGIC3-209ENST00000447986 PCDH11XQ9BZA7 1347 aa17.51■□□□□ 0.39
ERGIC3-209ENST00000447986 PCDH11YQ9BZA8 1340 aa17.51■□□□□ 0.39
ERGIC3-209ENST00000447986 KDRP35968 1356 aa17.5■□□□□ 0.39
ERGIC3-209ENST00000447986 SF3B2Q13435 895 aaKnown RBP17.5■□□□□ 0.39
ERGIC3-209ENST00000447986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.39
ERGIC3-209ENST00000447986 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.39
ERGIC3-209ENST00000447986 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
ERGIC3-209ENST00000447986 HMOX1P09601 288 aa17.49■□□□□ 0.39
ERGIC3-209ENST00000447986 AMOTQ4VCS5 1084 aa17.49■□□□□ 0.39
ERGIC3-209ENST00000447986 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
ERGIC3-209ENST00000447986 PLEKHO1Q53GL0 409 aaPredicted RBP17.48■□□□□ 0.39
ERGIC3-209ENST00000447986 BCL9O00512 1426 aa17.47■□□□□ 0.39
ERGIC3-209ENST00000447986 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
ERGIC3-209ENST00000447986 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
ERGIC3-209ENST00000447986 TRIM37O94972 964 aa17.45■□□□□ 0.38
ERGIC3-209ENST00000447986 PKD1L3Q7Z443 1732 aa17.44■□□□□ 0.38
ERGIC3-209ENST00000447986 IFNL2Q8IZJ0 200 aa17.44■□□□□ 0.38
ERGIC3-209ENST00000447986 NEFMP07197 916 aa17.43■□□□□ 0.38
ERGIC3-209ENST00000447986 C1orf141Q5JVX7 400 aa17.43■□□□□ 0.38
ERGIC3-209ENST00000447986 CYP27B1O15528 508 aa17.43■□□□□ 0.38
ERGIC3-209ENST00000447986 FCHSD2O94868 740 aa17.43■□□□□ 0.38
ERGIC3-209ENST00000447986 PNNQ9H307 717 aaKnown RBP17.43■□□□□ 0.38
ERGIC3-209ENST00000447986 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
ERGIC3-209ENST00000447986 BAG6P46379 1132 aa17.42■□□□□ 0.38
ERGIC3-209ENST00000447986 ZNF530Q6P9A1 599 aaPredicted RBP17.42■□□□□ 0.38
ERGIC3-209ENST00000447986 BCL11BQ9C0K0 894 aaPredicted RBP17.42■□□□□ 0.38
ERGIC3-209ENST00000447986 PHKG2P15735 406 aa17.41■□□□□ 0.38
ERGIC3-209ENST00000447986 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
ERGIC3-209ENST00000447986 WDR43Q15061 677 aaKnown RBP eCLIP17.41■□□□□ 0.38
ERGIC3-209ENST00000447986 ACSBG1Q96GR2 724 aa17.41■□□□□ 0.38
ERGIC3-209ENST00000447986 SHANK3Q9BYB0 1731 aa17.41■□□□□ 0.38
ERGIC3-209ENST00000447986 RSPH6AQ9H0K4 717 aa17.4■□□□□ 0.38
ERGIC3-209ENST00000447986 APBA3O96018 575 aa17.39■□□□□ 0.38
ERGIC3-209ENST00000447986 NKX1-1Q15270 411 aaPredicted RBP17.39■□□□□ 0.38
ERGIC3-209ENST00000447986 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.38
ERGIC3-209ENST00000447986 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
ERGIC3-209ENST00000447986 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
ERGIC3-209ENST00000447986 DCAF5Q96JK2 942 aa17.37■□□□□ 0.37
ERGIC3-209ENST00000447986 KCNQ2O43526 872 aa17.36■□□□□ 0.37
ERGIC3-209ENST00000447986 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-209ENST00000447986 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
ERGIC3-209ENST00000447986 NHSQ6T4R5 1651 aa17.36■□□□□ 0.37
ERGIC3-209ENST00000447986 ATF5Q9Y2D1 282 aaPredicted RBP17.36■□□□□ 0.37
ERGIC3-209ENST00000447986 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
ERGIC3-209ENST00000447986 EP400Q96L91 3159 aa17.35■□□□□ 0.37
ERGIC3-209ENST00000447986 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
ERGIC3-209ENST00000447986 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
ERGIC3-209ENST00000447986 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
ERGIC3-209ENST00000447986 DEFB132Q7Z7B7 95 aa17.34■□□□□ 0.37
ERGIC3-209ENST00000447986 DOT1LQ8TEK3 1739 aa17.34■□□□□ 0.37
ERGIC3-209ENST00000447986 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.37
ERGIC3-209ENST00000447986 PLSCR1O15162 318 aa17.33■□□□□ 0.37
ERGIC3-209ENST00000447986 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.37
ERGIC3-209ENST00000447986 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.37
ERGIC3-209ENST00000447986 MPRIPQ6WCQ1 1025 aa17.33■□□□□ 0.37
ERGIC3-209ENST00000447986 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.37
ERGIC3-209ENST00000447986 GNAT3A8MTJ3 354 aa17.32■□□□□ 0.36
ERGIC3-209ENST00000447986 PTF1AQ7RTS3 328 aa17.32■□□□□ 0.36
ERGIC3-209ENST00000447986 TMOD3Q9NYL9 352 aa17.32■□□□□ 0.36
ERGIC3-209ENST00000447986 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
ERGIC3-209ENST00000447986 CABP4P57796 275 aa17.31■□□□□ 0.36
ERGIC3-209ENST00000447986 RTF1Q92541 710 aaKnown RBP17.31■□□□□ 0.36
ERGIC3-209ENST00000447986 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
ERGIC3-209ENST00000447986 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
ERGIC3-209ENST00000447986 CAMKK2Q96RR4 588 aa17.3■□□□□ 0.36
ERGIC3-209ENST00000447986 KDM6AO15550 1401 aaPredicted RBP17.3■□□□□ 0.36
ERGIC3-209ENST00000447986 EZH2Q15910 746 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 KAT6BQ8WYB5 2073 aa17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 RNMTO43148 476 aaKnown RBP17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 CCDC184Q52MB2 194 aa17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 PIGBQ92521 554 aa17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
ERGIC3-209ENST00000447986 TOGARAM1Q9Y4F4 1720 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms