RNA–Protein interactions for RNA: ENST00000447866.5

FDPS-203, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-203ENST00000447866 RGPD1P0DJD0 1748 aa20.36■□□□□ 0.85
FDPS-203ENST00000447866 MYBBP1AQ9BQG0 1328 aaKnown RBP20.36■□□□□ 0.85
FDPS-203ENST00000447866 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
FDPS-203ENST00000447866 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
FDPS-203ENST00000447866 HMOX1P09601 288 aa20.34■□□□□ 0.85
FDPS-203ENST00000447866 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
FDPS-203ENST00000447866 KDRP35968 1356 aa20.34■□□□□ 0.85
FDPS-203ENST00000447866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.856e-9■□□□□ 10.6
FDPS-203ENST00000447866 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
FDPS-203ENST00000447866 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
FDPS-203ENST00000447866 SHANK3Q9BYB0 1731 aa20.31■□□□□ 0.84
FDPS-203ENST00000447866 CYP27B1O15528 508 aa20.31■□□□□ 0.84
FDPS-203ENST00000447866 CCDC125Q86Z20 511 aa20.31■□□□□ 0.84
FDPS-203ENST00000447866 ANP32CO43423 234 aa20.3■□□□□ 0.84
FDPS-203ENST00000447866 TRIM37O94972 964 aa20.3■□□□□ 0.84
FDPS-203ENST00000447866 PLEKHO1Q53GL0 409 aaPredicted RBP20.3■□□□□ 0.84
FDPS-203ENST00000447866 BCL9O00512 1426 aa20.29■□□□□ 0.84
FDPS-203ENST00000447866 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
FDPS-203ENST00000447866 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
FDPS-203ENST00000447866 SBF2Q86WG5 1849 aa20.29■□□□□ 0.84
FDPS-203ENST00000447866 PTF1AQ7RTS3 328 aa20.28■□□□□ 0.84
FDPS-203ENST00000447866 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
FDPS-203ENST00000447866 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
FDPS-203ENST00000447866 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.84
FDPS-203ENST00000447866 AMOTQ4VCS5 1084 aa20.27■□□□□ 0.84
FDPS-203ENST00000447866 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
FDPS-203ENST00000447866 PLEKHG2Q9H7P9 1386 aa20.26■□□□□ 0.83
FDPS-203ENST00000447866 KCNQ2O43526 872 aa20.26■□□□□ 0.83
FDPS-203ENST00000447866 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
FDPS-203ENST00000447866 IFNL2Q8IZJ0 200 aa20.26■□□□□ 0.83
FDPS-203ENST00000447866 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
FDPS-203ENST00000447866 FCHSD2O94868 740 aa20.25■□□□□ 0.83
FDPS-203ENST00000447866 PHKG2P15735 406 aa20.25■□□□□ 0.83
FDPS-203ENST00000447866 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
FDPS-203ENST00000447866 EP400Q96L91 3159 aa20.24■□□□□ 0.83
FDPS-203ENST00000447866 SF3B2Q13435 895 aaKnown RBP20.24■□□□□ 0.83
FDPS-203ENST00000447866 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
FDPS-203ENST00000447866 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
FDPS-203ENST00000447866 MTHFSDQ2M296 383 aaKnown RBP20.23■□□□□ 0.83
FDPS-203ENST00000447866 ZNF530Q6P9A1 599 aaPredicted RBP20.23■□□□□ 0.83
FDPS-203ENST00000447866 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
FDPS-203ENST00000447866 PHACTR3Q96KR7 559 aa20.23■□□□□ 0.83
FDPS-203ENST00000447866 APBA3O96018 575 aa20.22■□□□□ 0.83
FDPS-203ENST00000447866 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
FDPS-203ENST00000447866 EN1Q05925 392 aaPredicted RBP20.19■□□□□ 0.82
FDPS-203ENST00000447866 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
FDPS-203ENST00000447866 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
FDPS-203ENST00000447866 HSP90AB1P08238 724 aaKnown RBP20.18■□□□□ 0.82
FDPS-203ENST00000447866 BAG6P46379 1132 aa20.18■□□□□ 0.82
FDPS-203ENST00000447866 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
FDPS-203ENST00000447866 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
FDPS-203ENST00000447866 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
FDPS-203ENST00000447866 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
FDPS-203ENST00000447866 MPRIPQ6WCQ1 1025 aa20.17■□□□□ 0.82
FDPS-203ENST00000447866 NHSQ6T4R5 1651 aa20.16■□□□□ 0.82
FDPS-203ENST00000447866 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
FDPS-203ENST00000447866 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
FDPS-203ENST00000447866 DCAF5Q96JK2 942 aa20.16■□□□□ 0.82
FDPS-203ENST00000447866 CAMKK2Q96RR4 588 aa20.16■□□□□ 0.82
FDPS-203ENST00000447866 PLSCR1O15162 318 aa20.15■□□□□ 0.82
FDPS-203ENST00000447866 WDR43Q15061 677 aaKnown RBP eCLIP20.15■□□□□ 0.823e-7■■■■□ 25.4
FDPS-203ENST00000447866 EZH2Q15910 746 aaKnown RBP20.15■□□□□ 0.82
FDPS-203ENST00000447866 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
FDPS-203ENST00000447866 LGR6Q9HBX8 967 aa20.15■□□□□ 0.82
FDPS-203ENST00000447866 ITGB4P16144 1822 aa20.15■□□□□ 0.82
FDPS-203ENST00000447866 TOGARAM1Q9Y4F4 1720 aa20.14■□□□□ 0.81
FDPS-203ENST00000447866 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
FDPS-203ENST00000447866 DIEXFQ68CQ4 756 aaKnown RBP20.14■□□□□ 0.81
FDPS-203ENST00000447866 MRS2Q9HD23 443 aa20.14■□□□□ 0.81
FDPS-203ENST00000447866 PROM2Q8N271 834 aa20.13■□□□□ 0.81
FDPS-203ENST00000447866 PIGBQ92521 554 aa20.13■□□□□ 0.81
FDPS-203ENST00000447866 BTAF1O14981 1849 aa20.13■□□□□ 0.81
FDPS-203ENST00000447866 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
FDPS-203ENST00000447866 GNAT3A8MTJ3 354 aa20.12■□□□□ 0.81
FDPS-203ENST00000447866 RNMTO43148 476 aaKnown RBP20.12■□□□□ 0.81
FDPS-203ENST00000447866 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
FDPS-203ENST00000447866 NEFMP07197 916 aa20.11■□□□□ 0.81
FDPS-203ENST00000447866 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
FDPS-203ENST00000447866 CABP4P57796 275 aa20.1■□□□□ 0.81
FDPS-203ENST00000447866 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
FDPS-203ENST00000447866 NFATC2IPQ8NCF5 419 aa20.1■□□□□ 0.81
FDPS-203ENST00000447866 TMOD3Q9NYL9 352 aa20.1■□□□□ 0.81
FDPS-203ENST00000447866 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
FDPS-203ENST00000447866 VIRMAQ69YN4 1812 aaKnown RBP20.09■□□□□ 0.81
FDPS-203ENST00000447866 MAPK8IP3Q9UPT6 1336 aa20.08■□□□□ 0.81
FDPS-203ENST00000447866 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
FDPS-203ENST00000447866 MAP3K5Q99683 1374 aa20.08■□□□□ 0.8
FDPS-203ENST00000447866 NFE2L2Q16236 605 aa20.07■□□□□ 0.8
FDPS-203ENST00000447866 TXNRD1Q16881 649 aa20.07■□□□□ 0.8
FDPS-203ENST00000447866 HTATSF1O43719 755 aaKnown RBP20.06■□□□□ 0.8
FDPS-203ENST00000447866 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
FDPS-203ENST00000447866 ATG3Q9NT62 314 aa20.06■□□□□ 0.8
FDPS-203ENST00000447866 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
FDPS-203ENST00000447866 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
FDPS-203ENST00000447866 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
FDPS-203ENST00000447866 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
FDPS-203ENST00000447866 RIPK4P57078 832 aa20.04■□□□□ 0.8
FDPS-203ENST00000447866 DCTN1Q14203 1278 aa20.04■□□□□ 0.8
FDPS-203ENST00000447866 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
FDPS-203ENST00000447866 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms