RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MEGF6O75095 1541 aa32.38■■■□□ 2.77
RFFL-206ENST00000447669 HSPA1LP34931 641 aa32.38■■■□□ 2.77
RFFL-206ENST00000447669 FKBP8Q14318 412 aa32.38■■■□□ 2.77
RFFL-206ENST00000447669 USP35Q9P2H5 1018 aa32.38■■■□□ 2.77
RFFL-206ENST00000447669 IL16Q14005 1332 aa32.38■■■□□ 2.77
RFFL-206ENST00000447669 GNAT3A8MTJ3 354 aa32.37■■■□□ 2.77
RFFL-206ENST00000447669 RAPGEF4Q8WZA2 1011 aa32.37■■■□□ 2.77
RFFL-206ENST00000447669 RTF1Q92541 710 aaKnown RBP32.37■■■□□ 2.77
RFFL-206ENST00000447669 ZNF530Q6P9A1 599 aaPredicted RBP32.36■■■□□ 2.77
RFFL-206ENST00000447669 COL14A1Q05707 1796 aaKnown RBP32.36■■■□□ 2.77
RFFL-206ENST00000447669 PLEKHO1Q53GL0 409 aaPredicted RBP32.36■■■□□ 2.77
RFFL-206ENST00000447669 MAP3K5Q99683 1374 aa32.34■■■□□ 2.77
RFFL-206ENST00000447669 EXOSC9Q06265 439 aaKnown RBP32.34■■■□□ 2.77
RFFL-206ENST00000447669 IL17REQ8NFR9 667 aa32.34■■■□□ 2.77
RFFL-206ENST00000447669 MIS18AQ9NYP9 233 aa32.34■■■□□ 2.77
RFFL-206ENST00000447669 MBIPQ9NS73 344 aa32.33■■■□□ 2.77
RFFL-206ENST00000447669 ZNF853P0CG23 659 aa32.33■■■□□ 2.77
RFFL-206ENST00000447669 TATP17735 454 aaPredicted RBP32.33■■■□□ 2.77
RFFL-206ENST00000447669 JCADQ9P266 1359 aa32.32■■■□□ 2.76
RFFL-206ENST00000447669 LGR6Q9HBX8 967 aa32.32■■■□□ 2.76
RFFL-206ENST00000447669 PLIN1O60240 522 aa32.31■■■□□ 2.76
RFFL-206ENST00000447669 IFT57Q9NWB7 429 aa32.31■■■□□ 2.76
RFFL-206ENST00000447669 CRB1P82279 1406 aa32.31■■■□□ 2.76
RFFL-206ENST00000447669 AMOTQ4VCS5 1084 aa32.31■■■□□ 2.76
RFFL-206ENST00000447669 CFAP44Q96MT7 982 aa32.31■■■□□ 2.76
RFFL-206ENST00000447669 CALD1Q05682 793 aaKnown RBP32.3■■■□□ 2.76
RFFL-206ENST00000447669 MPRIPQ6WCQ1 1025 aa32.3■■■□□ 2.76
RFFL-206ENST00000447669 CARD10Q9BWT7 1032 aa32.3■■■□□ 2.76
RFFL-206ENST00000447669 GNAI1P63096 354 aa32.29■■■□□ 2.76
RFFL-206ENST00000447669 PLCH1Q4KWH8 1693 aa32.29■■■□□ 2.76
RFFL-206ENST00000447669 RNF123Q5XPI4 1314 aa32.29■■■□□ 2.76
RFFL-206ENST00000447669 BCAR3O75815 825 aa32.29■■■□□ 2.76
RFFL-206ENST00000447669 NEFLP07196 543 aa32.29■■■□□ 2.76
RFFL-206ENST00000447669 AKAP4Q5JQC9 854 aa32.27■■■□□ 2.76
RFFL-206ENST00000447669 HTATSF1O43719 755 aaKnown RBP32.26■■■□□ 2.75
RFFL-206ENST00000447669 RRP1P56182 461 aaKnown RBP32.26■■■□□ 2.75
RFFL-206ENST00000447669 ELL2O00472 640 aaPredicted RBP32.25■■■□□ 2.75
RFFL-206ENST00000447669 C1orf141Q5JVX7 400 aa32.25■■■□□ 2.75
RFFL-206ENST00000447669 BCL2L13Q9BXK5 485 aa32.24■■■□□ 2.75
RFFL-206ENST00000447669 CHL1O00533 1208 aa32.24■■■□□ 2.75
RFFL-206ENST00000447669 TSPYL6Q8N831 410 aa32.24■■■□□ 2.75
RFFL-206ENST00000447669 KRT24Q2M2I5 525 aa32.23■■■□□ 2.75
RFFL-206ENST00000447669 C8orf37Q96NL8 207 aa32.23■■■□□ 2.75
RFFL-206ENST00000447669 VIRMAQ69YN4 1812 aaKnown RBP32.23■■■□□ 2.75
RFFL-206ENST00000447669 SPG7Q9UQ90 795 aa32.21■■■□□ 2.75
RFFL-206ENST00000447669 LRRC37A3O60309 1634 aa32.21■■■□□ 2.75
RFFL-206ENST00000447669 LRP6O75581 1613 aa32.21■■■□□ 2.75
RFFL-206ENST00000447669 CYP27B1O15528 508 aa32.21■■■□□ 2.75
RFFL-206ENST00000447669 IL2RBP14784 551 aa32.21■■■□□ 2.75
RFFL-206ENST00000447669 C8orf58Q8NAV2 365 aa32.21■■■□□ 2.75
RFFL-206ENST00000447669 RARSP54136 660 aaKnown RBP32.2■■■□□ 2.75
RFFL-206ENST00000447669 OVOS2A0A0G2JMS6 1433 aa32.2■■■□□ 2.74
RFFL-206ENST00000447669 CEMIPQ8WUJ3 1361 aa32.19■■■□□ 2.74
RFFL-206ENST00000447669 RNMTO43148 476 aaKnown RBP32.19■■■□□ 2.74
RFFL-206ENST00000447669 PHKG2P15735 406 aa32.19■■■□□ 2.74
RFFL-206ENST00000447669 NRAPQ86VF7 1730 aa32.18■■■□□ 2.74
RFFL-206ENST00000447669 TSPYL4Q9UJ04 414 aa32.18■■■□□ 2.74
RFFL-206ENST00000447669 PKD1L3Q7Z443 1732 aa32.18■■■□□ 2.74
RFFL-206ENST00000447669 NGLY1Q96IV0 654 aa32.17■■■□□ 2.74
RFFL-206ENST00000447669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.17■■■□□ 2.74
RFFL-206ENST00000447669 PARP4Q9UKK3 1724 aaKnown RBP32.17■■■□□ 2.74
RFFL-206ENST00000447669 ZCRB1Q8TBF4 217 aaKnown RBP32.16■■■□□ 2.74
RFFL-206ENST00000447669 C20orf194Q5TEA3 1177 aa32.15■■■□□ 2.74
RFFL-206ENST00000447669 SLIT2O94813 1529 aa32.15■■■□□ 2.74
RFFL-206ENST00000447669 TAF7Q15545 349 aaPredicted RBP32.14■■■□□ 2.74
RFFL-206ENST00000447669 IFNL2Q8IZJ0 200 aa32.14■■■□□ 2.74
RFFL-206ENST00000447669 SPATA31A6Q5VVP1 1343 aa32.14■■■□□ 2.73
RFFL-206ENST00000447669 TCERG1O14776 1098 aaKnown RBP32.13■■■□□ 2.73
RFFL-206ENST00000447669 VAMP4O75379 141 aa32.13■■■□□ 2.73
RFFL-206ENST00000447669 DDX54Q8TDD1 881 aaKnown RBP32.13■■■□□ 2.73
RFFL-206ENST00000447669 KDM6AO15550 1401 aaPredicted RBP32.12■■■□□ 2.73
RFFL-206ENST00000447669 TEFQ10587 303 aa32.11■■■□□ 2.73
RFFL-206ENST00000447669 TWISTNBQ3B726 338 aaPredicted RBP32.11■■■□□ 2.73
RFFL-206ENST00000447669 SSH1Q8WYL5 1049 aa32.11■■■□□ 2.73
RFFL-206ENST00000447669 CCDC9Q9Y3X0 531 aaKnown RBP32.11■■■□□ 2.73
RFFL-206ENST00000447669 SHANK3Q9BYB0 1731 aa32.1■■■□□ 2.73
RFFL-206ENST00000447669 KCNQ3O43525 872 aa32.1■■■□□ 2.73
RFFL-206ENST00000447669 FRAT1Q92837 279 aaPredicted RBP32.1■■■□□ 2.73
RFFL-206ENST00000447669 NWD2Q9ULI1 1742 aa32.09■■■□□ 2.73
RFFL-206ENST00000447669 SPATA31A1Q5TZJ5 1347 aa32.09■■■□□ 2.73
RFFL-206ENST00000447669 SCN11AQ9UI33 1791 aa32.08■■■□□ 2.73
RFFL-206ENST00000447669 BCL9LQ86UU0 1499 aa32.07■■■□□ 2.72
RFFL-206ENST00000447669 CT47B1P0C2W7 299 aaPredicted RBP32.07■■■□□ 2.72
RFFL-206ENST00000447669 UNC5CLQ8IV45 518 aa32.07■■■□□ 2.72
RFFL-206ENST00000447669 SMC4Q9NTJ3 1288 aa32.07■■■□□ 2.72
RFFL-206ENST00000447669 PCDH11XQ9BZA7 1347 aa32.06■■■□□ 2.72
RFFL-206ENST00000447669 PCDH11YQ9BZA8 1340 aa32.06■■■□□ 2.72
RFFL-206ENST00000447669 TNNQ9UQP3 1299 aa32.06■■■□□ 2.72
RFFL-206ENST00000447669 DISP2A7MBM2 1401 aa32.05■■■□□ 2.72
RFFL-206ENST00000447669 MEX3CQ5U5Q3 659 aaKnown RBP32.05■■■□□ 2.72
RFFL-206ENST00000447669 ADAMTS7Q9UKP4 1686 aa32.05■■■□□ 2.72
RFFL-206ENST00000447669 BTBD11A6QL63 1104 aa32.05■■■□□ 2.72
RFFL-206ENST00000447669 SPATA31A5Q5VU36 1347 aa32.04■■■□□ 2.72
RFFL-206ENST00000447669 SPATA31A7Q8IWB4 1347 aa32.04■■■□□ 2.72
RFFL-206ENST00000447669 NFATC2IPQ8NCF5 419 aa32.04■■■□□ 2.72
RFFL-206ENST00000447669 DCAF5Q96JK2 942 aa32.03■■■□□ 2.72
RFFL-206ENST00000447669 PLEKHG2Q9H7P9 1386 aa32.02■■■□□ 2.72
RFFL-206ENST00000447669 FNBP4Q8N3X1 1017 aaPredicted RBP32.02■■■□□ 2.72
RFFL-206ENST00000447669 SIPA1L3O60292 1781 aaPredicted RBP32.02■■■□□ 2.72
RFFL-206ENST00000447669 EXOC6Q8TAG9 804 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms