RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 WDR7Q9Y4E6 1490 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 AIMP1Q12904 312 aaKnown RBP13.45□□□□□ -0.26
ZNF550-204ENST00000447310 TPD52L1Q16890 204 aaPredicted RBP13.45□□□□□ -0.26
ZNF550-204ENST00000447310 LARP1BQ659C4 914 aaKnown RBP13.45□□□□□ -0.26
ZNF550-204ENST00000447310 FERMT3Q86UX7 667 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 GAS2L3Q86XJ1 694 aa13.45□□□□□ -0.26
ZNF550-204ENST00000447310 C1orf141Q5JVX7 400 aa13.44□□□□□ -0.26
ZNF550-204ENST00000447310 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
ZNF550-204ENST00000447310 FSD1Q9BTV5 496 aa13.44□□□□□ -0.26
ZNF550-204ENST00000447310 PDCP20941 246 aa13.44□□□□□ -0.26
ZNF550-204ENST00000447310 OFD1O75665 1012 aa13.44□□□□□ -0.26
ZNF550-204ENST00000447310 ANKRD44Q8N8A2 993 aa13.44□□□□□ -0.26
ZNF550-204ENST00000447310 JAKMIP1Q96N16 626 aaKnown RBP13.44□□□□□ -0.26
ZNF550-204ENST00000447310 FSD2A1L4K1 749 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 CSB-PGBD3P0DP91 1061 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 CEBPZQ03701 1054 aaKnown RBP13.43□□□□□ -0.26
ZNF550-204ENST00000447310 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 CCDC73Q6ZRK6 1079 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 PSMA5P28066 241 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 KRT85P78386 507 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 STK3Q13188 491 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 DCTPP1Q9H773 170 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 ZKSCAN5Q9Y2L8 839 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 ZNF830Q96NB3 372 aaPredicted RBP13.43□□□□□ -0.26
ZNF550-204ENST00000447310 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 FANCAO15360 1455 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 CASTP20810 708 aaKnown RBP13.43□□□□□ -0.26
ZNF550-204ENST00000447310 CCDC83Q8IWF9 413 aa13.43□□□□□ -0.26
ZNF550-204ENST00000447310 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 HOMER1Q86YM7 354 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 TNMDQ9H2S6 317 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 MCM5P33992 734 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 CCDC183Q5T5S1 534 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 OTUD7AQ8TE49 926 aaPredicted RBP13.42□□□□□ -0.26
ZNF550-204ENST00000447310 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 PDRG1Q9NUG6 133 aa13.42□□□□□ -0.26
ZNF550-204ENST00000447310 NPHP1O15259 732 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 HCLS1P14317 486 aaPredicted RBP13.41□□□□□ -0.26
ZNF550-204ENST00000447310 PDE1AP54750 535 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 CAMK4Q16566 473 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
ZNF550-204ENST00000447310 SDF4Q9BRK5 362 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 CBX1P83916 185 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 LRRFIP2Q9Y608 721 aaKnown RBP13.41□□□□□ -0.26
ZNF550-204ENST00000447310 PTPRTO14522 1441 aa13.41□□□□□ -0.26
ZNF550-204ENST00000447310 ADCY5O95622 1261 aa13.4□□□□□ -0.26
ZNF550-204ENST00000447310 PLA2R1Q13018 1463 aa13.4□□□□□ -0.26
ZNF550-204ENST00000447310 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
ZNF550-204ENST00000447310 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.26
ZNF550-204ENST00000447310 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
ZNF550-204ENST00000447310 NUP62CLQ9H1M0 184 aa13.4□□□□□ -0.26
ZNF550-204ENST00000447310 ABCC10Q5T3U5 1492 aa13.4□□□□□ -0.26
ZNF550-204ENST00000447310 FAM69CQ0P6D2 419 aa13.4□□□□□ -0.27
ZNF550-204ENST00000447310 DYNC1I1O14576 645 aa13.39□□□□□ -0.27
ZNF550-204ENST00000447310 PDCL2Q8N4E4 241 aa13.39□□□□□ -0.27
ZNF550-204ENST00000447310 PTPRCP08575 1304 aa13.39□□□□□ -0.27
ZNF550-204ENST00000447310 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
ZNF550-204ENST00000447310 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
ZNF550-204ENST00000447310 TAF7LQ5H9L4 462 aa13.39□□□□□ -0.27
ZNF550-204ENST00000447310 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 TARBP1Q13395 1621 aaKnown RBP13.38□□□□□ -0.27
ZNF550-204ENST00000447310 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
ZNF550-204ENST00000447310 CEP85Q6P2H3 762 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 CCDC112Q8NEF3 446 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 SIL1Q9H173 461 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 CEP170Q5SW79 1584 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
ZNF550-204ENST00000447310 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
ZNF550-204ENST00000447310 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 CPLX1O14810 134 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 FLIIQ13045 1269 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 MAP3K11Q16584 847 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 BLOC1S2Q6QNY1 142 aa13.38□□□□□ -0.27
ZNF550-204ENST00000447310 KINO60870 393 aaKnown RBP13.37□□□□□ -0.27
ZNF550-204ENST00000447310 CD2BP2O95400 341 aaKnown RBP13.37□□□□□ -0.27
ZNF550-204ENST00000447310 HS1BP3Q53T59 392 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 KIF1BPQ96EK5 621 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
ZNF550-204ENST00000447310 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
ZNF550-204ENST00000447310 STX6O43752 255 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 USP48Q86UV5 1035 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 ZSCAN31Q96LW9 406 aaPredicted RBP13.37□□□□□ -0.27
ZNF550-204ENST00000447310 MAST1Q9Y2H9 1570 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 GIMAP6Q6P9H5 292 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 ABTB2Q8N961 1025 aa13.37□□□□□ -0.27
ZNF550-204ENST00000447310 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
ZNF550-204ENST00000447310 AACSQ86V21 672 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 CREBRFQ8IUR6 639 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 NEUROD6Q96NK8 337 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 FILIP1Q7Z7B0 1213 aa13.36□□□□□ -0.27
ZNF550-204ENST00000447310 NOL7Q9UMY1 257 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms